RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 MTUS2Q5JR59 1369 aa14.45□□□□□ -0.1
PVT1-207ENST00000518528 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.45□□□□□ -0.1
PVT1-207ENST00000518528 CDC42BPAQ5VT25 1732 aa14.44□□□□□ -0.1
PVT1-207ENST00000518528 DNMT1P26358 1616 aaKnown RBP14.44□□□□□ -0.1
PVT1-207ENST00000518528 INO80Q9ULG1 1556 aaPredicted RBP14.43□□□□□ -0.1
PVT1-207ENST00000518528 RTEL1-TNFRSF6BF6WH68 1400 aa14.43□□□□□ -0.1
PVT1-207ENST00000518528 NPHP4O75161 1426 aaPredicted RBP14.43□□□□□ -0.1
PVT1-207ENST00000518528 SENP3Q9H4L4 574 aaPredicted RBP14.43□□□□□ -0.1
PVT1-207ENST00000518528 FAM135AQ9P2D6 1515 aa14.42□□□□□ -0.1
PVT1-207ENST00000518528 MIA2Q96PC5 1412 aa14.41□□□□□ -0.1
PVT1-207ENST00000518528 LRRIQ1Q96JM4 1722 aa14.41□□□□□ -0.1
PVT1-207ENST00000518528 RSPH4AQ5TD94 716 aa14.41□□□□□ -0.1
PVT1-207ENST00000518528 PZPP20742 1482 aa14.41□□□□□ -0.1
PVT1-207ENST00000518528 NLRP1Q9C000 1473 aa14.41□□□□□ -0.1
PVT1-207ENST00000518528 ZNF644Q9H582 1327 aaPredicted RBP14.41□□□□□ -0.1
PVT1-207ENST00000518528 MED14O60244 1454 aa14.38□□□□□ -0.11
PVT1-207ENST00000518528 NEURL4Q96JN8 1562 aa14.38□□□□□ -0.11
PVT1-207ENST00000518528 KDM5DQ9BY66 1539 aa14.37□□□□□ -0.11
PVT1-207ENST00000518528 ADGBQ8N7X0 1667 aa14.37□□□□□ -0.11
PVT1-207ENST00000518528 VWDEQ8N2E2 1590 aa14.37□□□□□ -0.11
PVT1-207ENST00000518528 MBD5Q9P267 1494 aa14.37□□□□□ -0.11
PVT1-207ENST00000518528 UGGT1Q9NYU2 1555 aa14.36□□□□□ -0.11
PVT1-207ENST00000518528 TSPY4P0CV99 314 aa14.35□□□□□ -0.11
PVT1-207ENST00000518528 TSPY10P0CW01 314 aa14.35□□□□□ -0.11
PVT1-207ENST00000518528 CHIC1Q5VXU3 224 aa14.34□□□□□ -0.11
PVT1-207ENST00000518528 POLR1AO95602 1720 aaPredicted RBP14.33□□□□□ -0.12
PVT1-207ENST00000518528 LRRC7Q96NW7 1537 aa14.33□□□□□ -0.12
PVT1-207ENST00000518528 DEPDC5O75140 1603 aa14.33□□□□□ -0.12
PVT1-207ENST00000518528 CCDC141Q6ZP82 1450 aa14.31□□□□□ -0.12
PVT1-207ENST00000518528 RGS17Q9UGC6 210 aaPredicted RBP14.31□□□□□ -0.12
PVT1-207ENST00000518528 EID1Q9Y6B2 187 aa14.3□□□□□ -0.12
PVT1-207ENST00000518528 CEP162Q5TB80 1403 aa14.3□□□□□ -0.12
PVT1-207ENST00000518528 ALKQ9UM73 1620 aa14.29□□□□□ -0.12
PVT1-207ENST00000518528 TXNDC2Q86VQ3 553 aa14.28□□□□□ -0.12
PVT1-207ENST00000518528 RNF17Q9BXT8 1623 aaKnown RBP14.28□□□□□ -0.12
PVT1-207ENST00000518528 IQGAP1P46940 1657 aa14.26□□□□□ -0.13
PVT1-207ENST00000518528 SYNMO15061 1565 aa14.26□□□□□ -0.13
PVT1-207ENST00000518528 TIAM1Q13009 1591 aa14.26□□□□□ -0.13
PVT1-207ENST00000518528 EHBP1L1Q8N3D4 1523 aa14.26□□□□□ -0.13
PVT1-207ENST00000518528 FAM135BQ49AJ0 1406 aa14.26□□□□□ -0.13
PVT1-207ENST00000518528 SCAF11Q99590 1463 aaKnown RBP14.25□□□□□ -0.13
PVT1-207ENST00000518528 POTEAQ6S8J7 498 aa14.25□□□□□ -0.13
PVT1-207ENST00000518528 CAMSAP2Q08AD1 1489 aa14.24□□□□□ -0.13
PVT1-207ENST00000518528 STAG3Q9UJ98 1225 aa14.23□□□□□ -0.13
PVT1-207ENST00000518528 ERVK-7P63135 1459 aa14.23□□□□□ -0.13
PVT1-207ENST00000518528 LTKP29376 864 aa14.22□□□□□ -0.13
PVT1-207ENST00000518528 ABCC3O15438 1527 aa14.21□□□□□ -0.13
PVT1-207ENST00000518528 PROSER2Q86WR7 435 aaPredicted RBP14.2□□□□□ -0.14
PVT1-207ENST00000518528 NCOA2Q15596 1464 aa14.19□□□□□ -0.14
PVT1-207ENST00000518528 KCNA6P17658 529 aa14.19□□□□□ -0.14
PVT1-207ENST00000518528 TMEM94Q12767 1356 aa14.19□□□□□ -0.14
PVT1-207ENST00000518528 ARHGAP23Q9P227 1491 aa14.17□□□□□ -0.14
PVT1-207ENST00000518528 ARHGEF5Q12774 1597 aa14.17□□□□□ -0.14
PVT1-207ENST00000518528 SLIT1O75093 1534 aa14.16□□□□□ -0.14
PVT1-207ENST00000518528 TMEM2Q9UHN6 1383 aa14.16□□□□□ -0.14
PVT1-207ENST00000518528 STRCP1A6NGW2 1772 aa14.15□□□□□ -0.14
PVT1-207ENST00000518528 LRRC9Q6ZRR7 1453 aa14.15□□□□□ -0.14
PVT1-207ENST00000518528 ZC3H13Q5T200 1668 aaKnown RBP14.14□□□□□ -0.15
PVT1-207ENST00000518528 MSH6P52701 1360 aa14.14□□□□□ -0.15
PVT1-207ENST00000518528 JCADQ9P266 1359 aa14.14□□□□□ -0.15
PVT1-207ENST00000518528 BCANQ96GW7 911 aa14.14□□□□□ -0.15
PVT1-207ENST00000518528 ARHGAP31Q2M1Z3 1444 aa14.14□□□□□ -0.15
PVT1-207ENST00000518528 MEX3CQ5U5Q3 659 aaKnown RBP14.13□□□□□ -0.15
PVT1-207ENST00000518528 SLAIN2Q9P270 581 aa14.13□□□□□ -0.15
PVT1-207ENST00000518528 KANK1Q14678 1352 aa14.12□□□□□ -0.15
PVT1-207ENST00000518528 ZNF772Q68DY9 489 aaPredicted RBP14.12□□□□□ -0.15
PVT1-207ENST00000518528 SLC26A8Q96RN1 970 aa14.12□□□□□ -0.15
PVT1-207ENST00000518528 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.12□□□□□ -0.152e-6■□□□□ 10.8
PVT1-207ENST00000518528 EIF2AK4Q9P2K8 1649 aaKnown RBP14.1□□□□□ -0.15
PVT1-207ENST00000518528 UBR1Q8IWV7 1749 aa14.1□□□□□ -0.15
PVT1-207ENST00000518528 RBM33Q96EV2 1170 aaKnown RBP14.09□□□□□ -0.15
PVT1-207ENST00000518528 DUOX2Q9NRD8 1548 aa14.09□□□□□ -0.15
PVT1-207ENST00000518528 MAST1Q9Y2H9 1570 aa14.09□□□□□ -0.15
PVT1-207ENST00000518528 KIF15Q9NS87 1388 aa14.09□□□□□ -0.15
PVT1-207ENST00000518528 MYOM3Q5VTT5 1437 aa14.08□□□□□ -0.15
PVT1-207ENST00000518528 HDGFP51858 240 aaKnown RBP14.08□□□□□ -0.16
PVT1-207ENST00000518528 IDI1Q13907 227 aa14.08□□□□□ -0.16
PVT1-207ENST00000518528 UPF1Q92900 1129 aaKnown RBP eCLIP14.08□□□□□ -0.16
PVT1-207ENST00000518528 SPATA31A6Q5VVP1 1343 aa14.08□□□□□ -0.16
PVT1-207ENST00000518528 NKTRP30414 1462 aaKnown RBP14.07□□□□□ -0.16
PVT1-207ENST00000518528 RRP7BPQ9NSQ0 103 aa14.07□□□□□ -0.16
PVT1-207ENST00000518528 PRDM15P57071 1507 aaPredicted RBP14.06□□□□□ -0.16
PVT1-207ENST00000518528 C14orf37Q86TY3 774 aa14.06□□□□□ -0.16
PVT1-207ENST00000518528 TRIM52Q96A61 297 aa14.06□□□□□ -0.16
PVT1-207ENST00000518528 ERBINQ96RT1 1412 aa14.06□□□□□ -0.16
PVT1-207ENST00000518528 EFCAB6Q5THR3 1501 aa14.05□□□□□ -0.16
PVT1-207ENST00000518528 ROBO1Q9Y6N7 1651 aa14.05□□□□□ -0.16
PVT1-207ENST00000518528 PPP1R15AO75807 674 aaPredicted RBP14.05□□□□□ -0.16
PVT1-207ENST00000518528 RXRBP28702 533 aa14.05□□□□□ -0.16
PVT1-207ENST00000518528 SLC52A1Q9NWF4 448 aa14.05□□□□□ -0.16
PVT1-207ENST00000518528 MROH1Q8NDA8 1641 aa14.04□□□□□ -0.16
PVT1-207ENST00000518528 FGD6Q6ZV73 1430 aa14.04□□□□□ -0.16
PVT1-207ENST00000518528 MAP3K1Q13233 1512 aa14.04□□□□□ -0.16
PVT1-207ENST00000518528 CADPS2Q86UW7 1296 aa14.03□□□□□ -0.16
PVT1-207ENST00000518528 ATF3P18847 181 aa14.02□□□□□ -0.17
PVT1-207ENST00000518528 NCOA3Q9Y6Q9 1424 aa14.01□□□□□ -0.17
PVT1-207ENST00000518528 XIRP1Q702N8 1843 aaKnown RBP14□□□□□ -0.17
PVT1-207ENST00000518528 CEP152O94986 1710 aa14□□□□□ -0.17
PVT1-207ENST00000518528 PIK3C2BO00750 1634 aa14□□□□□ -0.17
PVT1-207ENST00000518528 TET3O43151 1660 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms