RNA–Protein interactions for RNA: ENST00000518407.1

IGHV3-6-201, Transcript of immunoglobulin heavy variable 3-6 (pseudogene), humanhuman

BASIC

Gene IGHV3-6, Length 347 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-6-201ENST00000518407 CLTCQ00610 1675 aaKnown RBP19.1■□□□□ 0.65
IGHV3-6-201ENST00000518407 ZC3H13Q5T200 1668 aaKnown RBP19.1■□□□□ 0.65
IGHV3-6-201ENST00000518407 FAM135AQ9P2D6 1515 aa19.09■□□□□ 0.65
IGHV3-6-201ENST00000518407 HFM1A2PYH4 1435 aa19.08■□□□□ 0.65
IGHV3-6-201ENST00000518407 NAIPQ13075 1403 aa19.08■□□□□ 0.65
IGHV3-6-201ENST00000518407 ARID4BQ4LE39 1312 aaPredicted RBP19.08■□□□□ 0.65
IGHV3-6-201ENST00000518407 ANKRD50Q9ULJ7 1429 aa19.08■□□□□ 0.64
IGHV3-6-201ENST00000518407 VWDEQ8N2E2 1590 aa19.06■□□□□ 0.64
IGHV3-6-201ENST00000518407 KDM5DQ9BY66 1539 aa19.05■□□□□ 0.64
IGHV3-6-201ENST00000518407 C3P01024 1663 aa19.05■□□□□ 0.64
IGHV3-6-201ENST00000518407 KDM4FA0A1W2PPD8 638 aa19.05■□□□□ 0.64
IGHV3-6-201ENST00000518407 KIF3BO15066 747 aa19.03■□□□□ 0.64
IGHV3-6-201ENST00000518407 CAMSAP1Q5T5Y3 1602 aa19.03■□□□□ 0.64
IGHV3-6-201ENST00000518407 IQGAP3Q86VI3 1631 aa19.02■□□□□ 0.64
IGHV3-6-201ENST00000518407 ABCC3O15438 1527 aa19.01■□□□□ 0.63
IGHV3-6-201ENST00000518407 MLECQ14165 292 aa19.01■□□□□ 0.63
IGHV3-6-201ENST00000518407 CNTLNQ9NXG0 1405 aa18.99■□□□□ 0.63
IGHV3-6-201ENST00000518407 PTPRMP28827 1452 aa18.98■□□□□ 0.63
IGHV3-6-201ENST00000518407 LMTK2Q8IWU2 1503 aa18.98■□□□□ 0.63
IGHV3-6-201ENST00000518407 TET3O43151 1660 aa18.98■□□□□ 0.63
IGHV3-6-201ENST00000518407 GGT6Q6P531 493 aa18.97■□□□□ 0.63
IGHV3-6-201ENST00000518407 PPP6R1Q9UPN7 881 aa18.96■□□□□ 0.63
IGHV3-6-201ENST00000518407 CFAP65Q6ZU64 1925 aaKnown RBP18.95■□□□□ 0.62
IGHV3-6-201ENST00000518407 EFCAB6Q5THR3 1501 aa18.94■□□□□ 0.62
IGHV3-6-201ENST00000518407 SETD5Q9C0A6 1442 aa18.92■□□□□ 0.62
IGHV3-6-201ENST00000518407 E9PCH4 1651 aa18.92■□□□□ 0.62
IGHV3-6-201ENST00000518407 PREX1Q8TCU6 1659 aa18.92■□□□□ 0.62
IGHV3-6-201ENST00000518407 PZPP20742 1482 aa18.9■□□□□ 0.62
IGHV3-6-201ENST00000518407 SETD1BQ9UPS6 1966 aaKnown RBP18.9■□□□□ 0.62
IGHV3-6-201ENST00000518407 TRIM26Q12899 539 aaPredicted RBP18.9■□□□□ 0.62
IGHV3-6-201ENST00000518407 KANK1Q14678 1352 aa18.89■□□□□ 0.61
IGHV3-6-201ENST00000518407 ZMYM3Q14202 1370 aa18.88■□□□□ 0.61
IGHV3-6-201ENST00000518407 RAB3GAP2Q9H2M9 1393 aa18.88■□□□□ 0.61
IGHV3-6-201ENST00000518407 ARHGAP31Q2M1Z3 1444 aa18.88■□□□□ 0.61
IGHV3-6-201ENST00000518407 SPATA31D1Q6ZQQ2 1576 aa18.87■□□□□ 0.61
IGHV3-6-201ENST00000518407 WASHC2CQ9Y4E1 1318 aa18.87■□□□□ 0.61
IGHV3-6-201ENST00000518407 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.86■□□□□ 0.61
IGHV3-6-201ENST00000518407 MYO3AQ8NEV4 1616 aa18.85■□□□□ 0.61
IGHV3-6-201ENST00000518407 NPATQ14207 1427 aa18.85■□□□□ 0.61
IGHV3-6-201ENST00000518407 ESF1Q9H501 851 aaKnown RBP18.85■□□□□ 0.61
IGHV3-6-201ENST00000518407 SPHKAPQ2M3C7 1700 aa18.85■□□□□ 0.61
IGHV3-6-201ENST00000518407 ZNF142P52746 1687 aaPredicted RBP18.85■□□□□ 0.61
IGHV3-6-201ENST00000518407 NUP155O75694 1391 aa18.84■□□□□ 0.61
IGHV3-6-201ENST00000518407 RPRD2Q5VT52 1461 aaKnown RBP18.84■□□□□ 0.61
IGHV3-6-201ENST00000518407 ERVK-7P63135 1459 aa18.83■□□□□ 0.6
IGHV3-6-201ENST00000518407 SYNMO15061 1565 aa18.82■□□□□ 0.6
IGHV3-6-201ENST00000518407 CEBPAP49715 358 aaPredicted RBP18.82■□□□□ 0.6
IGHV3-6-201ENST00000518407 PIK3C2BO00750 1634 aa18.78■□□□□ 0.6
IGHV3-6-201ENST00000518407 NOS1P29475 1434 aa18.78■□□□□ 0.6
IGHV3-6-201ENST00000518407 HRCP23327 699 aa18.77■□□□□ 0.6
IGHV3-6-201ENST00000518407 ACIN1Q9UKV3 1341 aaKnown RBP18.75■□□□□ 0.59
IGHV3-6-201ENST00000518407 MYO5BQ9ULV0 1848 aa18.75■□□□□ 0.59
IGHV3-6-201ENST00000518407 FBXO31Q5XUX0 539 aaPredicted RBP18.75■□□□□ 0.59
IGHV3-6-201ENST00000518407 CEP170BQ9Y4F5 1589 aaPredicted RBP18.75■□□□□ 0.59
IGHV3-6-201ENST00000518407 KDM5AP29375 1690 aaKnown RBP18.75■□□□□ 0.59
IGHV3-6-201ENST00000518407 LMTK3Q96Q04 1460 aa18.74■□□□□ 0.59
IGHV3-6-201ENST00000518407 PLPPR3Q6T4P5 718 aa18.74■□□□□ 0.59
IGHV3-6-201ENST00000518407 TRIM52Q96A61 297 aa18.74■□□□□ 0.59
IGHV3-6-201ENST00000518407 UBR1Q8IWV7 1749 aa18.74■□□□□ 0.59
IGHV3-6-201ENST00000518407 TNRQ92752 1358 aa18.73■□□□□ 0.59
IGHV3-6-201ENST00000518407 TRPM2O94759 1503 aa18.73■□□□□ 0.59
IGHV3-6-201ENST00000518407 PTPRTO14522 1441 aa18.72■□□□□ 0.59
IGHV3-6-201ENST00000518407 NLRP1Q9C000 1473 aa18.71■□□□□ 0.59
IGHV3-6-201ENST00000518407 CLTCL1P53675 1640 aa18.71■□□□□ 0.59
IGHV3-6-201ENST00000518407 UHRF1BP1Q6BDS2 1440 aa18.7■□□□□ 0.58
IGHV3-6-201ENST00000518407 UGGT1Q9NYU2 1555 aa18.7■□□□□ 0.58
IGHV3-6-201ENST00000518407 A2ML1A8K2U0 1454 aa18.7■□□□□ 0.58
IGHV3-6-201ENST00000518407 KIF1BO60333 1816 aa18.69■□□□□ 0.58
IGHV3-6-201ENST00000518407 MPHOSPH9Q99550 1183 aa18.68■□□□□ 0.58
IGHV3-6-201ENST00000518407 SLC4A1APQ9BWU0 796 aaKnown RBP18.68■□□□□ 0.58
IGHV3-6-201ENST00000518407 PLA2R1Q13018 1463 aa18.68■□□□□ 0.58
IGHV3-6-201ENST00000518407 AEBP2Q6ZN18 517 aaPredicted RBP18.67■□□□□ 0.58
IGHV3-6-201ENST00000518407 TMEM131LA2VDJ0 1609 aa18.67■□□□□ 0.58
IGHV3-6-201ENST00000518407 ADGRB3O60242 1522 aa18.66■□□□□ 0.58
IGHV3-6-201ENST00000518407 PKD2Q13563 968 aa18.66■□□□□ 0.58
IGHV3-6-201ENST00000518407 POLR1AO95602 1720 aaPredicted RBP18.65■□□□□ 0.58
IGHV3-6-201ENST00000518407 PCGF6Q9BYE7 350 aa18.64■□□□□ 0.57
IGHV3-6-201ENST00000518407 STRCQ7RTU9 1775 aa18.63■□□□□ 0.57
IGHV3-6-201ENST00000518407 FOXD1Q16676 465 aa18.6■□□□□ 0.57
IGHV3-6-201ENST00000518407 DHX57Q6P158 1386 aaKnown RBP18.58■□□□□ 0.57
IGHV3-6-201ENST00000518407 IDI1Q13907 227 aa18.58■□□□□ 0.56
IGHV3-6-201ENST00000518407 SLC52A1Q9NWF4 448 aa18.58■□□□□ 0.56
IGHV3-6-201ENST00000518407 SLIT1O75093 1534 aa18.58■□□□□ 0.56
IGHV3-6-201ENST00000518407 IFT172Q9UG01 1749 aa18.57■□□□□ 0.56
IGHV3-6-201ENST00000518407 NEURL4Q96JN8 1562 aa18.57■□□□□ 0.56
IGHV3-6-201ENST00000518407 ARHGAP23Q9P227 1491 aa18.57■□□□□ 0.56
IGHV3-6-201ENST00000518407 ANKRD30BQ9BXX2 1392 aa18.56■□□□□ 0.56
IGHV3-6-201ENST00000518407 PPLO60437 1756 aa18.55■□□□□ 0.56
IGHV3-6-201ENST00000518407 CCDC144AA2RUR9 1427 aa18.52■□□□□ 0.56
IGHV3-6-201ENST00000518407 HSPA2P54652 639 aa18.52■□□□□ 0.56
IGHV3-6-201ENST00000518407 NEXMIFQ5QGS0 1516 aa18.51■□□□□ 0.55
IGHV3-6-201ENST00000518407 ZFYVE9O95405 1425 aa18.5■□□□□ 0.55
IGHV3-6-201ENST00000518407 SPATA31E1Q6ZUB1 1445 aa18.5■□□□□ 0.55
IGHV3-6-201ENST00000518407 IQGAP1P46940 1657 aa18.49■□□□□ 0.55
IGHV3-6-201ENST00000518407 TMEM2Q9UHN6 1383 aa18.48■□□□□ 0.55
IGHV3-6-201ENST00000518407 THEMISQ8N1K5 641 aaPredicted RBP18.47■□□□□ 0.55
IGHV3-6-201ENST00000518407 MED14O60244 1454 aa18.46■□□□□ 0.55
IGHV3-6-201ENST00000518407 SCAF11Q99590 1463 aaKnown RBP18.46■□□□□ 0.55
IGHV3-6-201ENST00000518407 RIMS2Q9UQ26 1411 aa18.44■□□□□ 0.54
IGHV3-6-201ENST00000518407 NRXN3Q9Y4C0 1643 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms