RNA–Protein interactions for RNA: ENST00000518343.5

MSR1-208, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 4

Gene MSR1, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-208ENST00000518343 PTPRKQ15262 1439 aa9.24□□□□□ -0.93
MSR1-208ENST00000518343 FYCO1Q9BQS8 1478 aa9.24□□□□□ -0.93
MSR1-208ENST00000518343 ATP7AQ04656 1500 aa9.24□□□□□ -0.93
MSR1-208ENST00000518343 PLXNC1O60486 1568 aa9.24□□□□□ -0.93
MSR1-208ENST00000518343 CDC42BPAQ5VT25 1732 aa9.23□□□□□ -0.93
MSR1-208ENST00000518343 ADGBQ8N7X0 1667 aa9.23□□□□□ -0.93
MSR1-208ENST00000518343 A2ML1A8K2U0 1454 aa9.22□□□□□ -0.93
MSR1-208ENST00000518343 A2MP01023 1474 aa9.22□□□□□ -0.93
MSR1-208ENST00000518343 ZNF335Q9H4Z2 1342 aaPredicted RBP9.22□□□□□ -0.93
MSR1-208ENST00000518343 NCKAP5LQ9HCH0 1330 aa9.21□□□□□ -0.94
MSR1-208ENST00000518343 RTEL1-TNFRSF6BF6WH68 1400 aa9.21□□□□□ -0.94
MSR1-208ENST00000518343 INO80Q9ULG1 1556 aaPredicted RBP9.2□□□□□ -0.94
MSR1-208ENST00000518343 CLTCQ00610 1675 aaKnown RBP9.2□□□□□ -0.94
MSR1-208ENST00000518343 RSPH4AQ5TD94 716 aa9.2□□□□□ -0.94
MSR1-208ENST00000518343 CFDP1Q9UEE9 299 aaPredicted RBP9.2□□□□□ -0.94
MSR1-208ENST00000518343 SYCP2Q9BX26 1530 aa9.2□□□□□ -0.94
MSR1-208ENST00000518343 POLR1AO95602 1720 aaPredicted RBP9.19□□□□□ -0.94
MSR1-208ENST00000518343 LRRIQ1Q96JM4 1722 aa9.19□□□□□ -0.94
MSR1-208ENST00000518343 ANKLE2Q86XL3 938 aa9.19□□□□□ -0.94
MSR1-208ENST00000518343 THEMISQ8N1K5 641 aaPredicted RBP9.19□□□□□ -0.94
MSR1-208ENST00000518343 ZNF777Q9ULD5 760 aaPredicted RBP9.19□□□□□ -0.94
MSR1-208ENST00000518343 CCNB3Q8WWL7 1395 aa9.19□□□□□ -0.94
MSR1-208ENST00000518343 GPATCH8Q9UKJ3 1502 aaKnown RBP9.19□□□□□ -0.94
MSR1-208ENST00000518343 MED1Q15648 1581 aaPredicted RBP9.18□□□□□ -0.94
MSR1-208ENST00000518343 GGT6Q6P531 493 aa9.18□□□□□ -0.94
MSR1-208ENST00000518343 NLRP1Q9C000 1473 aa9.18□□□□□ -0.94
MSR1-208ENST00000518343 SHANK2Q9UPX8 1470 aa9.18□□□□□ -0.94
MSR1-208ENST00000518343 DEPDC5O75140 1603 aa9.17□□□□□ -0.94
MSR1-208ENST00000518343 DNMT1P26358 1616 aaKnown RBP9.17□□□□□ -0.94
MSR1-208ENST00000518343 PZPP20742 1482 aa9.16□□□□□ -0.94
MSR1-208ENST00000518343 DHX29Q7Z478 1369 aaKnown RBP9.16□□□□□ -0.94
MSR1-208ENST00000518343 TNRQ92752 1358 aa9.16□□□□□ -0.94
MSR1-208ENST00000518343 HNRNPMP52272 730 aaKnown RBP eCLIP9.16□□□□□ -0.94
MSR1-208ENST00000518343 KDM5DQ9BY66 1539 aa9.15□□□□□ -0.94
MSR1-208ENST00000518343 MED14O60244 1454 aa9.15□□□□□ -0.94
MSR1-208ENST00000518343 MTUS2Q5JR59 1369 aa9.15□□□□□ -0.94
MSR1-208ENST00000518343 HSPA1LP34931 641 aa9.15□□□□□ -0.94
MSR1-208ENST00000518343 ZNF219Q9P2Y4 722 aaPredicted RBP9.15□□□□□ -0.94
MSR1-208ENST00000518343 PIP4K2BP78356 416 aa9.14□□□□□ -0.95
MSR1-208ENST00000518343 WASHC2CQ9Y4E1 1318 aa9.13□□□□□ -0.95
MSR1-208ENST00000518343 SYNMO15061 1565 aa9.13□□□□□ -0.95
MSR1-208ENST00000518343 UGGT1Q9NYU2 1555 aa9.12□□□□□ -0.95
MSR1-208ENST00000518343 NPHP4O75161 1426 aaPredicted RBP9.12□□□□□ -0.95
MSR1-208ENST00000518343 MIA2Q96PC5 1412 aa9.12□□□□□ -0.95
MSR1-208ENST00000518343 NEURL4Q96JN8 1562 aa9.12□□□□□ -0.95
MSR1-208ENST00000518343 RNF17Q9BXT8 1623 aaKnown RBP9.11□□□□□ -0.95
MSR1-208ENST00000518343 EHBP1L1Q8N3D4 1523 aa9.1□□□□□ -0.95
MSR1-208ENST00000518343 IQGAP1P46940 1657 aa9.1□□□□□ -0.95
MSR1-208ENST00000518343 ZC3H13Q5T200 1668 aaKnown RBP9.1□□□□□ -0.95
MSR1-208ENST00000518343 CCDC141Q6ZP82 1450 aa9.1□□□□□ -0.95
MSR1-208ENST00000518343 MBD5Q9P267 1494 aa9.1□□□□□ -0.95
MSR1-208ENST00000518343 KIF3BO15066 747 aa9.1□□□□□ -0.95
MSR1-208ENST00000518343 CEP162Q5TB80 1403 aa9.1□□□□□ -0.95
MSR1-208ENST00000518343 VWDEQ8N2E2 1590 aa9.1□□□□□ -0.95
MSR1-208ENST00000518343 TSPY4P0CV99 314 aa9.09□□□□□ -0.95
MSR1-208ENST00000518343 TSPY10P0CW01 314 aa9.09□□□□□ -0.95
MSR1-208ENST00000518343 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.09□□□□□ -0.95
MSR1-208ENST00000518343 TIAM1Q13009 1591 aa9.07□□□□□ -0.96
MSR1-208ENST00000518343 APLP2Q06481 763 aa9.07□□□□□ -0.96
MSR1-208ENST00000518343 ARHGEF5Q12774 1597 aa9.07□□□□□ -0.96
MSR1-208ENST00000518343 LRRC7Q96NW7 1537 aa9.05□□□□□ -0.96
MSR1-208ENST00000518343 EIF2AK4Q9P2K8 1649 aaKnown RBP9.05□□□□□ -0.96
MSR1-208ENST00000518343 FBXO31Q5XUX0 539 aaPredicted RBP9.05□□□□□ -0.96
MSR1-208ENST00000518343 EHMT2Q96KQ7 1210 aa9.05□□□□□ -0.96
MSR1-208ENST00000518343 EID1Q9Y6B2 187 aa9.05□□□□□ -0.96
MSR1-208ENST00000518343 SCAF11Q99590 1463 aaKnown RBP9.04□□□□□ -0.96
MSR1-208ENST00000518343 FAM135BQ49AJ0 1406 aa9.04□□□□□ -0.96
MSR1-208ENST00000518343 CAMSAP2Q08AD1 1489 aa9.03□□□□□ -0.96
MSR1-208ENST00000518343 LRRC9Q6ZRR7 1453 aa9.03□□□□□ -0.96
MSR1-208ENST00000518343 SLIT1O75093 1534 aa9.02□□□□□ -0.97
MSR1-208ENST00000518343 KDM5AP29375 1690 aaKnown RBP9.02□□□□□ -0.97
MSR1-208ENST00000518343 ZNF644Q9H582 1327 aaPredicted RBP9.02□□□□□ -0.97
MSR1-208ENST00000518343 ERVK-7P63135 1459 aa9.02□□□□□ -0.97
MSR1-208ENST00000518343 ALKQ9UM73 1620 aa9.02□□□□□ -0.97
MSR1-208ENST00000518343 ABCC3O15438 1527 aa9.01□□□□□ -0.97
MSR1-208ENST00000518343 ARHGAP31Q2M1Z3 1444 aa9.01□□□□□ -0.97
MSR1-208ENST00000518343 SAMD1Q6SPF0 538 aaPredicted RBP9.01□□□□□ -0.97
MSR1-208ENST00000518343 MAST1Q9Y2H9 1570 aa9.01□□□□□ -0.97
MSR1-208ENST00000518343 NCOA2Q15596 1464 aa9□□□□□ -0.97
MSR1-208ENST00000518343 ARHGAP23Q9P227 1491 aa9□□□□□ -0.97
MSR1-208ENST00000518343 UBR1Q8IWV7 1749 aa9□□□□□ -0.97
MSR1-208ENST00000518343 TXNDC2Q86VQ3 553 aa8.99□□□□□ -0.97
MSR1-208ENST00000518343 DUOX2Q9NRD8 1548 aa8.98□□□□□ -0.97
MSR1-208ENST00000518343 STRCP1A6NGW2 1772 aa8.98□□□□□ -0.97
MSR1-208ENST00000518343 KANK1Q14678 1352 aa8.98□□□□□ -0.97
MSR1-208ENST00000518343 ERBINQ96RT1 1412 aa8.97□□□□□ -0.97
MSR1-208ENST00000518343 HDGFP51858 240 aaKnown RBP8.97□□□□□ -0.97
MSR1-208ENST00000518343 STAG3Q9UJ98 1225 aa8.97□□□□□ -0.97
MSR1-208ENST00000518343 MYOM3Q5VTT5 1437 aa8.97□□□□□ -0.97
MSR1-208ENST00000518343 NKTRP30414 1462 aaKnown RBP8.96□□□□□ -0.97
MSR1-208ENST00000518343 KCNA6P17658 529 aa8.96□□□□□ -0.98
MSR1-208ENST00000518343 TMEM2Q9UHN6 1383 aa8.96□□□□□ -0.98
MSR1-208ENST00000518343 NCOA3Q9Y6Q9 1424 aa8.96□□□□□ -0.98
MSR1-208ENST00000518343 PRDM15P57071 1507 aaPredicted RBP8.95□□□□□ -0.98
MSR1-208ENST00000518343 RGS17Q9UGC6 210 aaPredicted RBP8.95□□□□□ -0.98
MSR1-208ENST00000518343 MSH6P52701 1360 aa8.95□□□□□ -0.98
MSR1-208ENST00000518343 JCADQ9P266 1359 aa8.95□□□□□ -0.98
MSR1-208ENST00000518343 ZNF772Q68DY9 489 aaPredicted RBP8.94□□□□□ -0.98
MSR1-208ENST00000518343 RBM42Q9BTD8 480 aaKnown RBP8.94□□□□□ -0.98
MSR1-208ENST00000518343 SPATA31A6Q5VVP1 1343 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms