RNA–Protein interactions for RNA: ENST00000518224.1

IGHV3-25-201, Transcript of immunoglobulin heavy variable 3-25 (pseudogene), humanhuman

BASIC

Gene IGHV3-25, Length 351 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-25-201ENST00000518224 KIF3BO15066 747 aa17.64■□□□□ 0.41
IGHV3-25-201ENST00000518224 KDM5DQ9BY66 1539 aa17.62■□□□□ 0.41
IGHV3-25-201ENST00000518224 HSPA2P54652 639 aa17.62■□□□□ 0.41
IGHV3-25-201ENST00000518224 PLPPR3Q6T4P5 718 aa17.62■□□□□ 0.41
IGHV3-25-201ENST00000518224 MROH1Q8NDA8 1641 aa17.61■□□□□ 0.41
IGHV3-25-201ENST00000518224 ADGRL2O95490 1459 aa17.61■□□□□ 0.41
IGHV3-25-201ENST00000518224 KIF15Q9NS87 1388 aa17.6■□□□□ 0.41
IGHV3-25-201ENST00000518224 ERBINQ96RT1 1412 aa17.6■□□□□ 0.41
IGHV3-25-201ENST00000518224 PZPP20742 1482 aa17.59■□□□□ 0.41
IGHV3-25-201ENST00000518224 NCOA1Q15788 1441 aa17.59■□□□□ 0.41
IGHV3-25-201ENST00000518224 ZNF142P52746 1687 aaPredicted RBP17.57■□□□□ 0.4
IGHV3-25-201ENST00000518224 ZC3H13Q5T200 1668 aaKnown RBP17.57■□□□□ 0.4
IGHV3-25-201ENST00000518224 ABCC3O15438 1527 aa17.57■□□□□ 0.4
IGHV3-25-201ENST00000518224 STRCQ7RTU9 1775 aa17.56■□□□□ 0.4
IGHV3-25-201ENST00000518224 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.56■□□□□ 0.4
IGHV3-25-201ENST00000518224 PRDM15P57071 1507 aaPredicted RBP17.56■□□□□ 0.4
IGHV3-25-201ENST00000518224 ANKRD30AQ9BXX3 1397 aa17.55■□□□□ 0.4
IGHV3-25-201ENST00000518224 DEPDC5O75140 1603 aa17.55■□□□□ 0.4
IGHV3-25-201ENST00000518224 MYO3AQ8NEV4 1616 aa17.54■□□□□ 0.4
IGHV3-25-201ENST00000518224 WASHC2CQ9Y4E1 1318 aa17.54■□□□□ 0.4
IGHV3-25-201ENST00000518224 RRP7BPQ9NSQ0 103 aa17.52■□□□□ 0.4
IGHV3-25-201ENST00000518224 CEP170BQ9Y4F5 1589 aaPredicted RBP17.52■□□□□ 0.39
IGHV3-25-201ENST00000518224 VWDEQ8N2E2 1590 aa17.51■□□□□ 0.39
IGHV3-25-201ENST00000518224 PLA2R1Q13018 1463 aa17.5■□□□□ 0.39
IGHV3-25-201ENST00000518224 ARHGAP31Q2M1Z3 1444 aa17.5■□□□□ 0.39
IGHV3-25-201ENST00000518224 A2ML1A8K2U0 1454 aa17.5■□□□□ 0.39
IGHV3-25-201ENST00000518224 SPATA31D1Q6ZQQ2 1576 aa17.49■□□□□ 0.39
IGHV3-25-201ENST00000518224 PTPRTO14522 1441 aa17.49■□□□□ 0.39
IGHV3-25-201ENST00000518224 FAM50AQ14320 339 aaKnown RBP17.49■□□□□ 0.39
IGHV3-25-201ENST00000518224 ROCK1Q13464 1354 aa17.49■□□□□ 0.39
IGHV3-25-201ENST00000518224 TNRQ92752 1358 aa17.49■□□□□ 0.39
IGHV3-25-201ENST00000518224 LMTK2Q8IWU2 1503 aa17.48■□□□□ 0.39
IGHV3-25-201ENST00000518224 FBXO31Q5XUX0 539 aaPredicted RBP17.48■□□□□ 0.39
IGHV3-25-201ENST00000518224 CHIC2Q9UKJ5 165 aa17.48■□□□□ 0.39
IGHV3-25-201ENST00000518224 CAMSAP1Q5T5Y3 1602 aa17.47■□□□□ 0.39
IGHV3-25-201ENST00000518224 DMRT2Q9Y5R5 561 aa17.47■□□□□ 0.39
IGHV3-25-201ENST00000518224 NLRP1Q9C000 1473 aa17.47■□□□□ 0.39
IGHV3-25-201ENST00000518224 RRBP1Q9P2E9 1410 aaKnown RBP17.47■□□□□ 0.39
IGHV3-25-201ENST00000518224 CEP152O94986 1710 aa17.46■□□□□ 0.39
IGHV3-25-201ENST00000518224 ERVK-7P63135 1459 aa17.45■□□□□ 0.38
IGHV3-25-201ENST00000518224 ANKRD50Q9ULJ7 1429 aa17.45■□□□□ 0.38
IGHV3-25-201ENST00000518224 PKD2Q13563 968 aa17.41■□□□□ 0.38
IGHV3-25-201ENST00000518224 KANK1Q14678 1352 aa17.4■□□□□ 0.38
IGHV3-25-201ENST00000518224 PPARGC1BQ86YN6 1023 aaKnown RBP17.4■□□□□ 0.38
IGHV3-25-201ENST00000518224 UNC13BO14795 1591 aa17.38■□□□□ 0.37
IGHV3-25-201ENST00000518224 EFCAB6Q5THR3 1501 aa17.37■□□□□ 0.37
IGHV3-25-201ENST00000518224 UGGT1Q9NYU2 1555 aa17.37■□□□□ 0.37
IGHV3-25-201ENST00000518224 ILDR1Q86SU0 546 aaPredicted RBP17.36■□□□□ 0.37
IGHV3-25-201ENST00000518224 NOS1P29475 1434 aa17.36■□□□□ 0.37
IGHV3-25-201ENST00000518224 RPRD2Q5VT52 1461 aaKnown RBP17.36■□□□□ 0.37
IGHV3-25-201ENST00000518224 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.35■□□□□ 0.37
IGHV3-25-201ENST00000518224 NCKAP5LQ9HCH0 1330 aa17.35■□□□□ 0.37
IGHV3-25-201ENST00000518224 NEURL4Q96JN8 1562 aa17.35■□□□□ 0.37
IGHV3-25-201ENST00000518224 LTBP4Q8N2S1 1624 aa17.35■□□□□ 0.37
IGHV3-25-201ENST00000518224 MED14O60244 1454 aa17.34■□□□□ 0.37
IGHV3-25-201ENST00000518224 THEMISQ8N1K5 641 aaPredicted RBP17.34■□□□□ 0.37
IGHV3-25-201ENST00000518224 FBXO41Q8TF61 875 aa17.33■□□□□ 0.36
IGHV3-25-201ENST00000518224 CFAP65Q6ZU64 1925 aaKnown RBP17.33■□□□□ 0.36
IGHV3-25-201ENST00000518224 UBR1Q8IWV7 1749 aa17.33■□□□□ 0.36
IGHV3-25-201ENST00000518224 TET3O43151 1660 aa17.32■□□□□ 0.36
IGHV3-25-201ENST00000518224 KDM5AP29375 1690 aaKnown RBP17.32■□□□□ 0.36
IGHV3-25-201ENST00000518224 CERKQ8TCT0 537 aa17.32■□□□□ 0.36
IGHV3-25-201ENST00000518224 POLR1AO95602 1720 aaPredicted RBP17.32■□□□□ 0.36
IGHV3-25-201ENST00000518224 SYNMO15061 1565 aa17.32■□□□□ 0.36
IGHV3-25-201ENST00000518224 ARHGAP23Q9P227 1491 aa17.31■□□□□ 0.36
IGHV3-25-201ENST00000518224 IQGAP3Q86VI3 1631 aa17.31■□□□□ 0.36
IGHV3-25-201ENST00000518224 SLIT1O75093 1534 aa17.31■□□□□ 0.36
IGHV3-25-201ENST00000518224 GCC2Q8IWJ2 1684 aa17.29■□□□□ 0.36
IGHV3-25-201ENST00000518224 ANKLE2Q86XL3 938 aa17.28■□□□□ 0.36
IGHV3-25-201ENST00000518224 IQSEC2Q5JU85 1478 aa17.28■□□□□ 0.36
IGHV3-25-201ENST00000518224 NAIPQ13075 1403 aa17.28■□□□□ 0.36
IGHV3-25-201ENST00000518224 PIK3C2BO00750 1634 aa17.27■□□□□ 0.36
IGHV3-25-201ENST00000518224 HFM1A2PYH4 1435 aa17.25■□□□□ 0.35
IGHV3-25-201ENST00000518224 ITGAEP38570 1179 aa17.25■□□□□ 0.35
IGHV3-25-201ENST00000518224 IDI1Q13907 227 aa17.25■□□□□ 0.35
IGHV3-25-201ENST00000518224 SLC52A1Q9NWF4 448 aa17.25■□□□□ 0.35
IGHV3-25-201ENST00000518224 NPHP4O75161 1426 aaPredicted RBP17.24■□□□□ 0.35
IGHV3-25-201ENST00000518224 E9PCH4 1651 aa17.24■□□□□ 0.35
IGHV3-25-201ENST00000518224 NUP155O75694 1391 aa17.23■□□□□ 0.35
IGHV3-25-201ENST00000518224 TMEM2Q9UHN6 1383 aa17.23■□□□□ 0.35
IGHV3-25-201ENST00000518224 SCAF11Q99590 1463 aaKnown RBP17.23■□□□□ 0.35
IGHV3-25-201ENST00000518224 ZNF335Q9H4Z2 1342 aaPredicted RBP17.22■□□□□ 0.35
IGHV3-25-201ENST00000518224 IQGAP1P46940 1657 aa17.22■□□□□ 0.35
IGHV3-25-201ENST00000518224 ADGRB3O60242 1522 aa17.21■□□□□ 0.35
IGHV3-25-201ENST00000518224 LTKP29376 864 aa17.2■□□□□ 0.34
IGHV3-25-201ENST00000518224 CPS1P31327 1500 aa17.17■□□□□ 0.34
IGHV3-25-201ENST00000518224 TMEM131LA2VDJ0 1609 aa17.17■□□□□ 0.34
IGHV3-25-201ENST00000518224 ZFYVE9O95405 1425 aa17.16■□□□□ 0.34
IGHV3-25-201ENST00000518224 TXNDC2Q86VQ3 553 aa17.16■□□□□ 0.34
IGHV3-25-201ENST00000518224 EID1Q9Y6B2 187 aa17.13■□□□□ 0.33
IGHV3-25-201ENST00000518224 SPHKAPQ2M3C7 1700 aa17.11■□□□□ 0.33
IGHV3-25-201ENST00000518224 STRCP1A6NGW2 1772 aa17.11■□□□□ 0.33
IGHV3-25-201ENST00000518224 STAG3Q9UJ98 1225 aa17.11■□□□□ 0.33
IGHV3-25-201ENST00000518224 MYO5BQ9ULV0 1848 aa17.11■□□□□ 0.33
IGHV3-25-201ENST00000518224 TRPM2O94759 1503 aa17.09■□□□□ 0.33
IGHV3-25-201ENST00000518224 RIMS2Q9UQ26 1411 aa17.07■□□□□ 0.32
IGHV3-25-201ENST00000518224 PLEKHG1Q9ULL1 1385 aa17.07■□□□□ 0.32
IGHV3-25-201ENST00000518224 LRRC7Q96NW7 1537 aa17.06■□□□□ 0.32
IGHV3-25-201ENST00000518224 HDGFP51858 240 aaKnown RBP17.04■□□□□ 0.32
IGHV3-25-201ENST00000518224 CLTCL1P53675 1640 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms