RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 FBXO31Q5XUX0 539 aaPredicted RBP18.43■□□□□ 0.54
CTNNA1-205ENST00000517904 EHBP1L1Q8N3D4 1523 aa18.43■□□□□ 0.54
CTNNA1-205ENST00000517904 TNRQ92752 1358 aa18.42■□□□□ 0.54
CTNNA1-205ENST00000517904 HSPA1LP34931 641 aa18.41■□□□□ 0.54
CTNNA1-205ENST00000517904 CEP162Q5TB80 1403 aa18.4■□□□□ 0.54
CTNNA1-205ENST00000517904 PZPP20742 1482 aa18.4■□□□□ 0.54
CTNNA1-205ENST00000517904 CPS1P31327 1500 aa18.4■□□□□ 0.54
CTNNA1-205ENST00000517904 KDM5DQ9BY66 1539 aa18.4■□□□□ 0.54
CTNNA1-205ENST00000517904 SHANK2Q9UPX8 1470 aa18.39■□□□□ 0.54
CTNNA1-205ENST00000517904 KIF3BO15066 747 aa18.39■□□□□ 0.53
CTNNA1-205ENST00000517904 MED1Q15648 1581 aaPredicted RBP18.38■□□□□ 0.53
CTNNA1-205ENST00000517904 PIP4K2BP78356 416 aa18.38■□□□□ 0.53
CTNNA1-205ENST00000517904 SCAF1Q9H7N4 1312 aaKnown RBP18.38■□□□□ 0.53
CTNNA1-205ENST00000517904 CCDC141Q6ZP82 1450 aa18.38■□□□□ 0.53
CTNNA1-205ENST00000517904 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.37■□□□□ 0.53
CTNNA1-205ENST00000517904 FAM135AQ9P2D6 1515 aa18.37■□□□□ 0.53
CTNNA1-205ENST00000517904 VWDEQ8N2E2 1590 aa18.37■□□□□ 0.53
CTNNA1-205ENST00000517904 CAMSAP2Q08AD1 1489 aa18.35■□□□□ 0.53
CTNNA1-205ENST00000517904 ALKQ9UM73 1620 aa18.34■□□□□ 0.53
CTNNA1-205ENST00000517904 WASHC2CQ9Y4E1 1318 aa18.34■□□□□ 0.53
CTNNA1-205ENST00000517904 TOM1O60784 492 aa18.34■□□□□ 0.53
CTNNA1-205ENST00000517904 MIA2Q96PC5 1412 aa18.33■□□□□ 0.53
CTNNA1-205ENST00000517904 UGGT1Q9NYU2 1555 aa18.33■□□□□ 0.52
CTNNA1-205ENST00000517904 MED14O60244 1454 aa18.33■□□□□ 0.52
CTNNA1-205ENST00000517904 NCOA2Q15596 1464 aa18.33■□□□□ 0.52
CTNNA1-205ENST00000517904 NLRP1Q9C000 1473 aa18.33■□□□□ 0.52
CTNNA1-205ENST00000517904 ANKLE2Q86XL3 938 aa18.32■□□□□ 0.52
CTNNA1-205ENST00000517904 DEPDC5O75140 1603 aa18.31■□□□□ 0.52
CTNNA1-205ENST00000517904 NPHP4O75161 1426 aaPredicted RBP18.31■□□□□ 0.52
CTNNA1-205ENST00000517904 THEMISQ8N1K5 641 aaPredicted RBP18.3■□□□□ 0.52
CTNNA1-205ENST00000517904 ARHGEF5Q12774 1597 aa18.29■□□□□ 0.52
CTNNA1-205ENST00000517904 IQGAP1P46940 1657 aa18.28■□□□□ 0.52
CTNNA1-205ENST00000517904 STRCP1A6NGW2 1772 aa18.28■□□□□ 0.52
CTNNA1-205ENST00000517904 RSPH4AQ5TD94 716 aa18.27■□□□□ 0.52
CTNNA1-205ENST00000517904 SENP3Q9H4L4 574 aaPredicted RBP18.26■□□□□ 0.51
CTNNA1-205ENST00000517904 RNF17Q9BXT8 1623 aaKnown RBP18.26■□□□□ 0.51
CTNNA1-205ENST00000517904 ABCC3O15438 1527 aa18.25■□□□□ 0.51
CTNNA1-205ENST00000517904 LRRC7Q96NW7 1537 aa18.23■□□□□ 0.51
CTNNA1-205ENST00000517904 ZC3H13Q5T200 1668 aaKnown RBP18.23■□□□□ 0.51
CTNNA1-205ENST00000517904 TSPY4P0CV99 314 aa18.22■□□□□ 0.51
CTNNA1-205ENST00000517904 TSPY10P0CW01 314 aa18.22■□□□□ 0.51
CTNNA1-205ENST00000517904 ERVK-7P63135 1459 aa18.21■□□□□ 0.51
CTNNA1-205ENST00000517904 MROH1Q8NDA8 1641 aa18.21■□□□□ 0.51
CTNNA1-205ENST00000517904 SYNMO15061 1565 aa18.21■□□□□ 0.51
CTNNA1-205ENST00000517904 MAST1Q9Y2H9 1570 aa18.21■□□□□ 0.51
CTNNA1-205ENST00000517904 EIF2AK4Q9P2K8 1649 aaKnown RBP18.19■□□□□ 0.5
CTNNA1-205ENST00000517904 UBR1Q8IWV7 1749 aa18.18■□□□□ 0.5
CTNNA1-205ENST00000517904 CEP152O94986 1710 aa18.18■□□□□ 0.5
CTNNA1-205ENST00000517904 CFAP65Q6ZU64 1925 aaKnown RBP18.16■□□□□ 0.5
CTNNA1-205ENST00000517904 LRRC9Q6ZRR7 1453 aa18.15■□□□□ 0.5
CTNNA1-205ENST00000517904 SCAF11Q99590 1463 aaKnown RBP18.14■□□□□ 0.5
CTNNA1-205ENST00000517904 ARHGAP23Q9P227 1491 aa18.13■□□□□ 0.49
CTNNA1-205ENST00000517904 XIRP1Q702N8 1843 aaKnown RBP18.12■□□□□ 0.49
CTNNA1-205ENST00000517904 LTKP29376 864 aa18.12■□□□□ 0.49
CTNNA1-205ENST00000517904 SLIT1O75093 1534 aa18.12■□□□□ 0.49
CTNNA1-205ENST00000517904 DUOX2Q9NRD8 1548 aa18.1■□□□□ 0.49
CTNNA1-205ENST00000517904 RGS17Q9UGC6 210 aaPredicted RBP18.09■□□□□ 0.49
CTNNA1-205ENST00000517904 PRDM15P57071 1507 aaPredicted RBP18.08■□□□□ 0.49
CTNNA1-205ENST00000517904 ARHGAP31Q2M1Z3 1444 aa18.08■□□□□ 0.49
CTNNA1-205ENST00000517904 MYOM3Q5VTT5 1437 aa18.08■□□□□ 0.49
CTNNA1-205ENST00000517904 VPS8Q8N3P4 1428 aa18.08■□□□□ 0.49
CTNNA1-205ENST00000517904 KANK4Q5T7N3 995 aaPredicted RBP18.08■□□□□ 0.48
CTNNA1-205ENST00000517904 TXNDC2Q86VQ3 553 aa18.08■□□□□ 0.48
CTNNA1-205ENST00000517904 PIK3C2BO00750 1634 aa18.05■□□□□ 0.48
CTNNA1-205ENST00000517904 KIF15Q9NS87 1388 aa18.04■□□□□ 0.48
CTNNA1-205ENST00000517904 MAP3K1Q13233 1512 aa18.03■□□□□ 0.48
CTNNA1-205ENST00000517904 CROCC2H7BZ55 1655 aa18.03■□□□□ 0.48
CTNNA1-205ENST00000517904 ERBINQ96RT1 1412 aa18.03■□□□□ 0.48
CTNNA1-205ENST00000517904 TMEM2Q9UHN6 1383 aa18.03■□□□□ 0.48
CTNNA1-205ENST00000517904 ABCC5O15440 1437 aa18.01■□□□□ 0.47
CTNNA1-205ENST00000517904 FAM135BQ49AJ0 1406 aa18.01■□□□□ 0.47
CTNNA1-205ENST00000517904 EID1Q9Y6B2 187 aa18.01■□□□□ 0.47
CTNNA1-205ENST00000517904 RRP7BPQ9NSQ0 103 aa18■□□□□ 0.47
CTNNA1-205ENST00000517904 TMEM94Q12767 1356 aa18■□□□□ 0.47
CTNNA1-205ENST00000517904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.99■□□□□ 0.479e-8■□□□□ 9.6
CTNNA1-205ENST00000517904 EFCAB6Q5THR3 1501 aa17.98■□□□□ 0.47
CTNNA1-205ENST00000517904 KDM5AP29375 1690 aaKnown RBP17.98■□□□□ 0.47
CTNNA1-205ENST00000517904 TET3O43151 1660 aa17.97■□□□□ 0.47
CTNNA1-205ENST00000517904 ROBO1Q9Y6N7 1651 aa17.97■□□□□ 0.47
CTNNA1-205ENST00000517904 IDI1Q13907 227 aa17.96■□□□□ 0.47
CTNNA1-205ENST00000517904 POTEAQ6S8J7 498 aa17.96■□□□□ 0.47
CTNNA1-205ENST00000517904 PTPN23Q9H3S7 1636 aa17.96■□□□□ 0.47
CTNNA1-205ENST00000517904 LMTK2Q8IWU2 1503 aa17.96■□□□□ 0.47
CTNNA1-205ENST00000517904 LOC105371045A0A1W2PR82 267 aa17.95■□□□□ 0.46
CTNNA1-205ENST00000517904 KCNA6P17658 529 aa17.95■□□□□ 0.46
CTNNA1-205ENST00000517904 RBM33Q96EV2 1170 aaKnown RBP17.95■□□□□ 0.46
CTNNA1-205ENST00000517904 STAG3Q9UJ98 1225 aa17.95■□□□□ 0.46
CTNNA1-205ENST00000517904 DAPK1P53355 1430 aa17.95■□□□□ 0.46
CTNNA1-205ENST00000517904 SLC26A8Q96RN1 970 aa17.94■□□□□ 0.46
CTNNA1-205ENST00000517904 KANK1Q14678 1352 aa17.93■□□□□ 0.46
CTNNA1-205ENST00000517904 NWD1Q149M9 1564 aa17.92■□□□□ 0.46
CTNNA1-205ENST00000517904 NOS1P29475 1434 aa17.91■□□□□ 0.46
CTNNA1-205ENST00000517904 PROSER2Q86WR7 435 aaPredicted RBP17.91■□□□□ 0.46
CTNNA1-205ENST00000517904 ADGRB3O60242 1522 aa17.91■□□□□ 0.46
CTNNA1-205ENST00000517904 NKTRP30414 1462 aaKnown RBP17.9■□□□□ 0.46
CTNNA1-205ENST00000517904 FGD6Q6ZV73 1430 aa17.89■□□□□ 0.45
CTNNA1-205ENST00000517904 CHIC2Q9UKJ5 165 aa17.88■□□□□ 0.45
CTNNA1-205ENST00000517904 ANKRD30AQ9BXX3 1397 aa17.87■□□□□ 0.45
CTNNA1-205ENST00000517904 SETD1AO15047 1707 aaKnown RBP17.86■□□□□ 0.45
CTNNA1-205ENST00000517904 PHLPP1O60346 1717 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms