RNA–Protein interactions for RNA: ENST00000517857.1

TOP1MT-203, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2

Gene TOP1MT, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-203ENST00000517857 ITGAEP38570 1179 aa22.25■■□□□ 1.15
TOP1MT-203ENST00000517857 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.25■■□□□ 1.15
TOP1MT-203ENST00000517857 ERBINQ96RT1 1412 aa22.24■■□□□ 1.15
TOP1MT-203ENST00000517857 KDM5DQ9BY66 1539 aa22.23■■□□□ 1.15
TOP1MT-203ENST00000517857 NCOA1Q15788 1441 aa22.23■■□□□ 1.15
TOP1MT-203ENST00000517857 CEBPAP49715 358 aaPredicted RBP22.22■■□□□ 1.15
TOP1MT-203ENST00000517857 FAM135AQ9P2D6 1515 aa22.21■■□□□ 1.15
TOP1MT-203ENST00000517857 PTPRKQ15262 1439 aa22.21■■□□□ 1.15
TOP1MT-203ENST00000517857 ZC3H13Q5T200 1668 aaKnown RBP22.2■■□□□ 1.14
TOP1MT-203ENST00000517857 PPP6R1Q9UPN7 881 aa22.19■■□□□ 1.14
TOP1MT-203ENST00000517857 MROH1Q8NDA8 1641 aa22.19■■□□□ 1.14
TOP1MT-203ENST00000517857 PREX1Q8TCU6 1659 aa22.19■■□□□ 1.14
TOP1MT-203ENST00000517857 CEP152O94986 1710 aa22.18■■□□□ 1.14
TOP1MT-203ENST00000517857 ZMYM3Q14202 1370 aa22.16■■□□□ 1.14
TOP1MT-203ENST00000517857 DEPDC5O75140 1603 aa22.16■■□□□ 1.14
TOP1MT-203ENST00000517857 PRDM15P57071 1507 aaPredicted RBP22.16■■□□□ 1.14
TOP1MT-203ENST00000517857 ROCK1Q13464 1354 aa22.15■■□□□ 1.14
TOP1MT-203ENST00000517857 WASHC2CQ9Y4E1 1318 aa22.15■■□□□ 1.14
TOP1MT-203ENST00000517857 ABCC3O15438 1527 aa22.14■■□□□ 1.13
TOP1MT-203ENST00000517857 ANKRD50Q9ULJ7 1429 aa22.14■■□□□ 1.13
TOP1MT-203ENST00000517857 LMTK3Q96Q04 1460 aa22.12■■□□□ 1.13
TOP1MT-203ENST00000517857 CAMSAP1Q5T5Y3 1602 aa22.12■■□□□ 1.13
TOP1MT-203ENST00000517857 SETD1BQ9UPS6 1966 aaKnown RBP22.11■■□□□ 1.13
TOP1MT-203ENST00000517857 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.11■■□□□ 1.135e-8■■□□□ 14.3
TOP1MT-203ENST00000517857 KANK1Q14678 1352 aa22.1■■□□□ 1.13
TOP1MT-203ENST00000517857 NPATQ14207 1427 aa22.09■■□□□ 1.13
TOP1MT-203ENST00000517857 UHRF1BP1Q6BDS2 1440 aa22.09■■□□□ 1.13
TOP1MT-203ENST00000517857 PZPP20742 1482 aa22.08■■□□□ 1.12
TOP1MT-203ENST00000517857 GCC2Q8IWJ2 1684 aa22.07■■□□□ 1.12
TOP1MT-203ENST00000517857 MYO3AQ8NEV4 1616 aa22.07■■□□□ 1.12
TOP1MT-203ENST00000517857 UNC13BO14795 1591 aa22.05■■□□□ 1.12
TOP1MT-203ENST00000517857 CFAP65Q6ZU64 1925 aaKnown RBP22.03■■□□□ 1.12
TOP1MT-203ENST00000517857 VWDEQ8N2E2 1590 aa22.03■■□□□ 1.12
TOP1MT-203ENST00000517857 ZNF142P52746 1687 aaPredicted RBP22.01■■□□□ 1.11
TOP1MT-203ENST00000517857 HSPA2P54652 639 aa22■■□□□ 1.11
TOP1MT-203ENST00000517857 LMTK2Q8IWU2 1503 aa22■■□□□ 1.11
TOP1MT-203ENST00000517857 TNRQ92752 1358 aa21.99■■□□□ 1.11
TOP1MT-203ENST00000517857 FBXO31Q5XUX0 539 aaPredicted RBP21.99■■□□□ 1.11
TOP1MT-203ENST00000517857 CEP170BQ9Y4F5 1589 aaPredicted RBP21.99■■□□□ 1.11
TOP1MT-203ENST00000517857 NAIPQ13075 1403 aa21.97■■□□□ 1.11
TOP1MT-203ENST00000517857 ERVK-7P63135 1459 aa21.97■■□□□ 1.11
TOP1MT-203ENST00000517857 EFCAB6Q5THR3 1501 aa21.97■■□□□ 1.11
TOP1MT-203ENST00000517857 SPATA31D1Q6ZQQ2 1576 aa21.97■■□□□ 1.11
TOP1MT-203ENST00000517857 TET3O43151 1660 aa21.97■■□□□ 1.11
TOP1MT-203ENST00000517857 IQGAP3Q86VI3 1631 aa21.96■■□□□ 1.11
TOP1MT-203ENST00000517857 HFM1A2PYH4 1435 aa21.96■■□□□ 1.11
TOP1MT-203ENST00000517857 ARHGAP31Q2M1Z3 1444 aa21.95■■□□□ 1.1
TOP1MT-203ENST00000517857 A2ML1A8K2U0 1454 aa21.92■■□□□ 1.1
TOP1MT-203ENST00000517857 NUP155O75694 1391 aa21.91■■□□□ 1.1
TOP1MT-203ENST00000517857 NLRP1Q9C000 1473 aa21.9■■□□□ 1.1
TOP1MT-203ENST00000517857 E9PCH4 1651 aa21.88■■□□□ 1.09
TOP1MT-203ENST00000517857 RPRD2Q5VT52 1461 aaKnown RBP21.87■■□□□ 1.09
TOP1MT-203ENST00000517857 STRCQ7RTU9 1775 aa21.87■■□□□ 1.09
TOP1MT-203ENST00000517857 UGGT1Q9NYU2 1555 aa21.86■■□□□ 1.09
TOP1MT-203ENST00000517857 SYNMO15061 1565 aa21.85■■□□□ 1.09
TOP1MT-203ENST00000517857 TRIM52Q96A61 297 aa21.83■■□□□ 1.09
TOP1MT-203ENST00000517857 PIK3C2BO00750 1634 aa21.82■■□□□ 1.08
TOP1MT-203ENST00000517857 UBR1Q8IWV7 1749 aa21.82■■□□□ 1.08
TOP1MT-203ENST00000517857 POLR1AO95602 1720 aaPredicted RBP21.81■■□□□ 1.08
TOP1MT-203ENST00000517857 PLA2R1Q13018 1463 aa21.81■■□□□ 1.08
TOP1MT-203ENST00000517857 NOS1P29475 1434 aa21.8■■□□□ 1.08
TOP1MT-203ENST00000517857 SPHKAPQ2M3C7 1700 aa21.78■■□□□ 1.08
TOP1MT-203ENST00000517857 SETD5Q9C0A6 1442 aa21.77■■□□□ 1.08
TOP1MT-203ENST00000517857 THEMISQ8N1K5 641 aaPredicted RBP21.76■■□□□ 1.07
TOP1MT-203ENST00000517857 STAG3Q9UJ98 1225 aa21.75■■□□□ 1.07
TOP1MT-203ENST00000517857 ADGRB3O60242 1522 aa21.75■■□□□ 1.07
TOP1MT-203ENST00000517857 KDM5AP29375 1690 aaKnown RBP21.74■■□□□ 1.07
TOP1MT-203ENST00000517857 NCKAP5LQ9HCH0 1330 aa21.74■■□□□ 1.07
TOP1MT-203ENST00000517857 DMRT2Q9Y5R5 561 aa21.73■■□□□ 1.07
TOP1MT-203ENST00000517857 PKD2Q13563 968 aa21.72■■□□□ 1.07
TOP1MT-203ENST00000517857 MYO5BQ9ULV0 1848 aa21.71■■□□□ 1.07
TOP1MT-203ENST00000517857 IDI1Q13907 227 aa21.71■■□□□ 1.07
TOP1MT-203ENST00000517857 PTPRTO14522 1441 aa21.71■■□□□ 1.07
TOP1MT-203ENST00000517857 SLC4A1APQ9BWU0 796 aaKnown RBP21.7■■□□□ 1.06
TOP1MT-203ENST00000517857 SLC52A1Q9NWF4 448 aa21.7■■□□□ 1.06
TOP1MT-203ENST00000517857 RAB3GAP2Q9H2M9 1393 aa21.7■■□□□ 1.06
TOP1MT-203ENST00000517857 NEURL4Q96JN8 1562 aa21.7■■□□□ 1.06
TOP1MT-203ENST00000517857 ANKLE2Q86XL3 938 aa21.68■■□□□ 1.06
TOP1MT-203ENST00000517857 TMEM131LA2VDJ0 1609 aa21.66■■□□□ 1.06
TOP1MT-203ENST00000517857 SLIT1O75093 1534 aa21.66■■□□□ 1.06
TOP1MT-203ENST00000517857 TRPM2O94759 1503 aa21.66■■□□□ 1.06
TOP1MT-203ENST00000517857 CHGAP10645 457 aaKnown RBP21.66■■□□□ 1.06
TOP1MT-203ENST00000517857 IQGAP1P46940 1657 aa21.66■■□□□ 1.06
TOP1MT-203ENST00000517857 ACIN1Q9UKV3 1341 aaKnown RBP21.65■■□□□ 1.06
TOP1MT-203ENST00000517857 SCAF11Q99590 1463 aaKnown RBP21.64■■□□□ 1.06
TOP1MT-203ENST00000517857 ARHGAP23Q9P227 1491 aa21.64■■□□□ 1.06
TOP1MT-203ENST00000517857 CLTCL1P53675 1640 aa21.64■■□□□ 1.05
TOP1MT-203ENST00000517857 NPHP4O75161 1426 aaPredicted RBP21.63■■□□□ 1.05
TOP1MT-203ENST00000517857 TMEM2Q9UHN6 1383 aa21.62■■□□□ 1.05
TOP1MT-203ENST00000517857 KIF1BO60333 1816 aa21.62■■□□□ 1.05
TOP1MT-203ENST00000517857 MPHOSPH9Q99550 1183 aa21.61■■□□□ 1.05
TOP1MT-203ENST00000517857 EID1Q9Y6B2 187 aa21.61■■□□□ 1.05
TOP1MT-203ENST00000517857 MED14O60244 1454 aa21.6■■□□□ 1.05
TOP1MT-203ENST00000517857 TXNDC2Q86VQ3 553 aa21.59■■□□□ 1.05
TOP1MT-203ENST00000517857 FOXD1Q16676 465 aa21.58■■□□□ 1.05
TOP1MT-203ENST00000517857 LTKP29376 864 aa21.56■■□□□ 1.04
TOP1MT-203ENST00000517857 RIMS2Q9UQ26 1411 aa21.55■■□□□ 1.04
TOP1MT-203ENST00000517857 PPP1R15AO75807 674 aaPredicted RBP21.54■■□□□ 1.04
TOP1MT-203ENST00000517857 ZFYVE9O95405 1425 aa21.54■■□□□ 1.04
TOP1MT-203ENST00000517857 ZNF326Q5BKZ1 582 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms