RNA–Protein interactions for RNA: ENST00000517744.1

IGKV1-35-201, Transcript of immunoglobulin kappa variable 1-35 (pseudogene), humanhuman

BASIC

Gene IGKV1-35, Length 285 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-35-201ENST00000517744 ADAMTSL3P82987 1691 aa16.35■□□□□ 0.21
IGKV1-35-201ENST00000517744 PRDM15P57071 1507 aaPredicted RBP16.34■□□□□ 0.21
IGKV1-35-201ENST00000517744 MROH1Q8NDA8 1641 aa16.34■□□□□ 0.21
IGKV1-35-201ENST00000517744 ACIN1Q9UKV3 1341 aaKnown RBP16.33■□□□□ 0.2
IGKV1-35-201ENST00000517744 SETD5Q9C0A6 1442 aa16.33■□□□□ 0.2
IGKV1-35-201ENST00000517744 UNC13BO14795 1591 aa16.33■□□□□ 0.2
IGKV1-35-201ENST00000517744 KDM5DQ9BY66 1539 aa16.32■□□□□ 0.2
IGKV1-35-201ENST00000517744 VWDEQ8N2E2 1590 aa16.31■□□□□ 0.2
IGKV1-35-201ENST00000517744 HRCP23327 699 aa16.3■□□□□ 0.2
IGKV1-35-201ENST00000517744 GGT6Q6P531 493 aa16.3■□□□□ 0.2
IGKV1-35-201ENST00000517744 ZC3H13Q5T200 1668 aaKnown RBP16.3■□□□□ 0.2
IGKV1-35-201ENST00000517744 CNTLNQ9NXG0 1405 aa16.29■□□□□ 0.2
IGKV1-35-201ENST00000517744 FER1L4A9Z1Z3 1794 aa16.28■□□□□ 0.2
IGKV1-35-201ENST00000517744 MADDQ8WXG6 1647 aa16.28■□□□□ 0.2
IGKV1-35-201ENST00000517744 MLECQ14165 292 aa16.28■□□□□ 0.2
IGKV1-35-201ENST00000517744 LMTK2Q8IWU2 1503 aa16.28■□□□□ 0.2
IGKV1-35-201ENST00000517744 MROH2AA6NES4 1674 aa16.27■□□□□ 0.2
IGKV1-35-201ENST00000517744 KANK1Q14678 1352 aa16.27■□□□□ 0.2
IGKV1-35-201ENST00000517744 ABCC3O15438 1527 aa16.26■□□□□ 0.19
IGKV1-35-201ENST00000517744 IQGAP3Q86VI3 1631 aa16.26■□□□□ 0.19
IGKV1-35-201ENST00000517744 RAB3GAP2Q9H2M9 1393 aa16.26■□□□□ 0.19
IGKV1-35-201ENST00000517744 KDM4FA0A1W2PPD8 638 aa16.25■□□□□ 0.19
IGKV1-35-201ENST00000517744 CLTCQ00610 1675 aaKnown RBP16.24■□□□□ 0.19
IGKV1-35-201ENST00000517744 WASHC2CQ9Y4E1 1318 aa16.24■□□□□ 0.19
IGKV1-35-201ENST00000517744 ESF1Q9H501 851 aaKnown RBP16.24■□□□□ 0.19
IGKV1-35-201ENST00000517744 RIMS1Q86UR5 1692 aaKnown RBP16.23■□□□□ 0.19
IGKV1-35-201ENST00000517744 NUP155O75694 1391 aa16.23■□□□□ 0.19
IGKV1-35-201ENST00000517744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.22■□□□□ 0.19
IGKV1-35-201ENST00000517744 CEP152O94986 1710 aa16.22■□□□□ 0.19
IGKV1-35-201ENST00000517744 TET3O43151 1660 aa16.21■□□□□ 0.19
IGKV1-35-201ENST00000517744 ARHGAP31Q2M1Z3 1444 aa16.21■□□□□ 0.19
IGKV1-35-201ENST00000517744 CAMSAP1Q5T5Y3 1602 aa16.21■□□□□ 0.19
IGKV1-35-201ENST00000517744 ZMYM3Q14202 1370 aa16.2■□□□□ 0.18
IGKV1-35-201ENST00000517744 PTPRMP28827 1452 aa16.2■□□□□ 0.18
IGKV1-35-201ENST00000517744 EFCAB6Q5THR3 1501 aa16.19■□□□□ 0.18
IGKV1-35-201ENST00000517744 C3P01024 1663 aa16.18■□□□□ 0.18
IGKV1-35-201ENST00000517744 PZPP20742 1482 aa16.18■□□□□ 0.18
IGKV1-35-201ENST00000517744 RPRD2Q5VT52 1461 aaKnown RBP16.17■□□□□ 0.18
IGKV1-35-201ENST00000517744 TRIM52Q96A61 297 aa16.17■□□□□ 0.18
IGKV1-35-201ENST00000517744 PCGF6Q9BYE7 350 aa16.16■□□□□ 0.18
IGKV1-35-201ENST00000517744 NPATQ14207 1427 aa16.15■□□□□ 0.18
IGKV1-35-201ENST00000517744 E9PCH4 1651 aa16.14■□□□□ 0.17
IGKV1-35-201ENST00000517744 SPATA31D1Q6ZQQ2 1576 aa16.13■□□□□ 0.17
IGKV1-35-201ENST00000517744 SLC4A1APQ9BWU0 796 aaKnown RBP16.12■□□□□ 0.17
IGKV1-35-201ENST00000517744 ERVK-7P63135 1459 aa16.11■□□□□ 0.17
IGKV1-35-201ENST00000517744 CEBPAP49715 358 aaPredicted RBP16.11■□□□□ 0.17
IGKV1-35-201ENST00000517744 MPHOSPH9Q99550 1183 aa16.11■□□□□ 0.17
IGKV1-35-201ENST00000517744 PREX1Q8TCU6 1659 aa16.11■□□□□ 0.17
IGKV1-35-201ENST00000517744 NOS1P29475 1434 aa16.11■□□□□ 0.17
IGKV1-35-201ENST00000517744 PKD2Q13563 968 aa16.09■□□□□ 0.17
IGKV1-35-201ENST00000517744 PTPRTO14522 1441 aa16.09■□□□□ 0.17
IGKV1-35-201ENST00000517744 SETD1BQ9UPS6 1966 aaKnown RBP16.08■□□□□ 0.16
IGKV1-35-201ENST00000517744 FBXO31Q5XUX0 539 aaPredicted RBP16.08■□□□□ 0.16
IGKV1-35-201ENST00000517744 TNRQ92752 1358 aa16.06■□□□□ 0.16
IGKV1-35-201ENST00000517744 SPHKAPQ2M3C7 1700 aa16.05■□□□□ 0.16
IGKV1-35-201ENST00000517744 SYNMO15061 1565 aa16.05■□□□□ 0.16
IGKV1-35-201ENST00000517744 NLRP1Q9C000 1473 aa16.04■□□□□ 0.16
IGKV1-35-201ENST00000517744 TRPM2O94759 1503 aa16.04■□□□□ 0.16
IGKV1-35-201ENST00000517744 CFAP65Q6ZU64 1925 aaKnown RBP16.04■□□□□ 0.16
IGKV1-35-201ENST00000517744 PLA2R1Q13018 1463 aa16.03■□□□□ 0.16
IGKV1-35-201ENST00000517744 SLC52A1Q9NWF4 448 aa16.03■□□□□ 0.16
IGKV1-35-201ENST00000517744 PIK3C2BO00750 1634 aa16.03■□□□□ 0.16
IGKV1-35-201ENST00000517744 MYO3AQ8NEV4 1616 aa16.02■□□□□ 0.16
IGKV1-35-201ENST00000517744 ZNF142P52746 1687 aaPredicted RBP16.02■□□□□ 0.15
IGKV1-35-201ENST00000517744 DHX57Q6P158 1386 aaKnown RBP16.01■□□□□ 0.15
IGKV1-35-201ENST00000517744 UHRF1BP1Q6BDS2 1440 aa16.01■□□□□ 0.15
IGKV1-35-201ENST00000517744 KDM5AP29375 1690 aaKnown RBP16■□□□□ 0.15
IGKV1-35-201ENST00000517744 A2ML1A8K2U0 1454 aa16■□□□□ 0.15
IGKV1-35-201ENST00000517744 PLPPR3Q6T4P5 718 aa16■□□□□ 0.15
IGKV1-35-201ENST00000517744 ANKRD30BQ9BXX2 1392 aa16■□□□□ 0.15
IGKV1-35-201ENST00000517744 CEP170BQ9Y4F5 1589 aaPredicted RBP15.99■□□□□ 0.15
IGKV1-35-201ENST00000517744 FOXD1Q16676 465 aa15.98■□□□□ 0.15
IGKV1-35-201ENST00000517744 IDI1Q13907 227 aa15.97■□□□□ 0.15
IGKV1-35-201ENST00000517744 CLTCL1P53675 1640 aa15.97■□□□□ 0.15
IGKV1-35-201ENST00000517744 LMTK3Q96Q04 1460 aa15.96■□□□□ 0.14
IGKV1-35-201ENST00000517744 UGGT1Q9NYU2 1555 aa15.96■□□□□ 0.14
IGKV1-35-201ENST00000517744 CCDC144AA2RUR9 1427 aa15.95■□□□□ 0.14
IGKV1-35-201ENST00000517744 ADGRB3O60242 1522 aa15.94■□□□□ 0.14
IGKV1-35-201ENST00000517744 UBR1Q8IWV7 1749 aa15.94■□□□□ 0.14
IGKV1-35-201ENST00000517744 NEURL4Q96JN8 1562 aa15.94■□□□□ 0.14
IGKV1-35-201ENST00000517744 TMEM131LA2VDJ0 1609 aa15.94■□□□□ 0.14
IGKV1-35-201ENST00000517744 KIF1BO60333 1816 aa15.91■□□□□ 0.14
IGKV1-35-201ENST00000517744 ILDR1Q86SU0 546 aaPredicted RBP15.91■□□□□ 0.14
IGKV1-35-201ENST00000517744 THEMISQ8N1K5 641 aaPredicted RBP15.91■□□□□ 0.14
IGKV1-35-201ENST00000517744 CLSPNQ9HAW4 1339 aa15.91■□□□□ 0.14
IGKV1-35-201ENST00000517744 SLIT1O75093 1534 aa15.89■□□□□ 0.13
IGKV1-35-201ENST00000517744 ARHGAP23Q9P227 1491 aa15.89■□□□□ 0.13
IGKV1-35-201ENST00000517744 SPATA31E1Q6ZUB1 1445 aa15.88■□□□□ 0.13
IGKV1-35-201ENST00000517744 STAG3Q9UJ98 1225 aa15.87■□□□□ 0.13
IGKV1-35-201ENST00000517744 MYO5BQ9ULV0 1848 aa15.87■□□□□ 0.13
IGKV1-35-201ENST00000517744 TMEM2Q9UHN6 1383 aa15.87■□□□□ 0.13
IGKV1-35-201ENST00000517744 RPGRIP1LQ68CZ1 1315 aa15.85■□□□□ 0.13
IGKV1-35-201ENST00000517744 ZFYVE9O95405 1425 aa15.85■□□□□ 0.13
IGKV1-35-201ENST00000517744 CHGAP10645 457 aaKnown RBP15.83■□□□□ 0.12
IGKV1-35-201ENST00000517744 HDGFP51858 240 aaKnown RBP15.82■□□□□ 0.12
IGKV1-35-201ENST00000517744 HSPA2P54652 639 aa15.82■□□□□ 0.12
IGKV1-35-201ENST00000517744 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.82■□□□□ 0.12
IGKV1-35-201ENST00000517744 RIMS2Q9UQ26 1411 aa15.82■□□□□ 0.12
IGKV1-35-201ENST00000517744 NEXMIFQ5QGS0 1516 aa15.82■□□□□ 0.12
IGKV1-35-201ENST00000517744 MED14O60244 1454 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms