RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.44■■■□□ 2.78
MTCL1-204ENST00000517554 RRBP1Q9P2E9 1410 aaKnown RBP32.43■■■□□ 2.78
MTCL1-204ENST00000517554 ZMYM3Q14202 1370 aa32.42■■■□□ 2.78
MTCL1-204ENST00000517554 EIF2AK4Q9P2K8 1649 aaKnown RBP32.41■■■□□ 2.78
MTCL1-204ENST00000517554 MROH2AA6NES4 1674 aa32.41■■■□□ 2.78
MTCL1-204ENST00000517554 RNF17Q9BXT8 1623 aaKnown RBP32.4■■■□□ 2.78
MTCL1-204ENST00000517554 LMTK3Q96Q04 1460 aa32.38■■■□□ 2.77
MTCL1-204ENST00000517554 ERBINQ96RT1 1412 aa32.38■■■□□ 2.77
MTCL1-204ENST00000517554 MROH1Q8NDA8 1641 aa32.37■■■□□ 2.77
MTCL1-204ENST00000517554 ITGAEP38570 1179 aa32.34■■■□□ 2.77
MTCL1-204ENST00000517554 KDM5DQ9BY66 1539 aa32.33■■■□□ 2.77
MTCL1-204ENST00000517554 WASHC2CQ9Y4E1 1318 aa32.31■■■□□ 2.76
MTCL1-204ENST00000517554 FAM135AQ9P2D6 1515 aa32.3■■■□□ 2.76
MTCL1-204ENST00000517554 ROCK1Q13464 1354 aa32.28■■■□□ 2.76
MTCL1-204ENST00000517554 ABCC3O15438 1527 aa32.27■■■□□ 2.76
MTCL1-204ENST00000517554 NPATQ14207 1427 aa32.26■■■□□ 2.75
MTCL1-204ENST00000517554 PREX1Q8TCU6 1659 aa32.25■■■□□ 2.75
MTCL1-204ENST00000517554 PRDM15P57071 1507 aaPredicted RBP32.25■■■□□ 2.75
MTCL1-204ENST00000517554 DEPDC5O75140 1603 aa32.25■■■□□ 2.75
MTCL1-204ENST00000517554 ANKRD50Q9ULJ7 1429 aa32.25■■■□□ 2.75
MTCL1-204ENST00000517554 HSPA2P54652 639 aa32.24■■■□□ 2.75
MTCL1-204ENST00000517554 FBXO31Q5XUX0 539 aaPredicted RBP32.22■■■□□ 2.75
MTCL1-204ENST00000517554 SETD1BQ9UPS6 1966 aaKnown RBP32.21■■■□□ 2.75
MTCL1-204ENST00000517554 PZPP20742 1482 aa32.2■■■□□ 2.75
MTCL1-204ENST00000517554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.2■■■□□ 2.75
MTCL1-204ENST00000517554 UHRF1BP1Q6BDS2 1440 aa32.2■■■□□ 2.74
MTCL1-204ENST00000517554 ZC3H13Q5T200 1668 aaKnown RBP32.19■■■□□ 2.74
MTCL1-204ENST00000517554 CEP152O94986 1710 aa32.18■■■□□ 2.74
MTCL1-204ENST00000517554 VWDEQ8N2E2 1590 aa32.16■■■□□ 2.74
MTCL1-204ENST00000517554 CAMSAP1Q5T5Y3 1602 aa32.12■■■□□ 2.73
MTCL1-204ENST00000517554 MYO3AQ8NEV4 1616 aa32.09■■■□□ 2.73
MTCL1-204ENST00000517554 KANK1Q14678 1352 aa32.09■■■□□ 2.73
MTCL1-204ENST00000517554 LMTK2Q8IWU2 1503 aa32.08■■■□□ 2.73
MTCL1-204ENST00000517554 TNRQ92752 1358 aa32.08■■■□□ 2.73
MTCL1-204ENST00000517554 ARHGAP31Q2M1Z3 1444 aa32.07■■■□□ 2.72
MTCL1-204ENST00000517554 UNC13BO14795 1591 aa32.05■■■□□ 2.72
MTCL1-204ENST00000517554 NAIPQ13075 1403 aa32.04■■■□□ 2.72
MTCL1-204ENST00000517554 SPATA31D1Q6ZQQ2 1576 aa32.04■■■□□ 2.72
MTCL1-204ENST00000517554 ERVK-7P63135 1459 aa32.03■■■□□ 2.72
MTCL1-204ENST00000517554 CEP170BQ9Y4F5 1589 aaPredicted RBP32.02■■■□□ 2.72
MTCL1-204ENST00000517554 ZNF142P52746 1687 aaPredicted RBP32.02■■■□□ 2.72
MTCL1-204ENST00000517554 A2ML1A8K2U0 1454 aa31.98■■■□□ 2.71
MTCL1-204ENST00000517554 EFCAB6Q5THR3 1501 aa31.97■■■□□ 2.71
MTCL1-204ENST00000517554 HFM1A2PYH4 1435 aa31.96■■■□□ 2.71
MTCL1-204ENST00000517554 STRCQ7RTU9 1775 aa31.96■■■□□ 2.71
MTCL1-204ENST00000517554 GCC2Q8IWJ2 1684 aa31.95■■■□□ 2.71
MTCL1-204ENST00000517554 CFAP65Q6ZU64 1925 aaKnown RBP31.95■■■□□ 2.7
MTCL1-204ENST00000517554 NLRP1Q9C000 1473 aa31.93■■■□□ 2.7
MTCL1-204ENST00000517554 NUP155O75694 1391 aa31.93■■■□□ 2.7
MTCL1-204ENST00000517554 IQGAP3Q86VI3 1631 aa31.91■■■□□ 2.7
MTCL1-204ENST00000517554 TET3O43151 1660 aa31.9■■■□□ 2.7
MTCL1-204ENST00000517554 NOS1P29475 1434 aa31.88■■■□□ 2.69
MTCL1-204ENST00000517554 SYNMO15061 1565 aa31.85■■■□□ 2.69
MTCL1-204ENST00000517554 PLA2R1Q13018 1463 aa31.85■■■□□ 2.69
MTCL1-204ENST00000517554 RPRD2Q5VT52 1461 aaKnown RBP31.85■■■□□ 2.69
MTCL1-204ENST00000517554 UGGT1Q9NYU2 1555 aa31.84■■■□□ 2.69
MTCL1-204ENST00000517554 NCKAP5LQ9HCH0 1330 aa31.83■■■□□ 2.69
MTCL1-204ENST00000517554 E9PCH4 1651 aa31.82■■■□□ 2.68
MTCL1-204ENST00000517554 IDI1Q13907 227 aa31.78■■■□□ 2.68
MTCL1-204ENST00000517554 THEMISQ8N1K5 641 aaPredicted RBP31.78■■■□□ 2.68
MTCL1-204ENST00000517554 UBR1Q8IWV7 1749 aa31.76■■■□□ 2.67
MTCL1-204ENST00000517554 PIK3C2BO00750 1634 aa31.75■■■□□ 2.67
MTCL1-204ENST00000517554 PTPRTO14522 1441 aa31.75■■■□□ 2.67
MTCL1-204ENST00000517554 DMRT2Q9Y5R5 561 aa31.74■■■□□ 2.67
MTCL1-204ENST00000517554 PKD2Q13563 968 aa31.73■■■□□ 2.67
MTCL1-204ENST00000517554 TRIM52Q96A61 297 aa31.71■■■□□ 2.67
MTCL1-204ENST00000517554 SLC52A1Q9NWF4 448 aa31.69■■■□□ 2.66
MTCL1-204ENST00000517554 NEURL4Q96JN8 1562 aa31.69■■■□□ 2.66
MTCL1-204ENST00000517554 SETD5Q9C0A6 1442 aa31.67■■■□□ 2.66
MTCL1-204ENST00000517554 ANKLE2Q86XL3 938 aa31.65■■■□□ 2.66
MTCL1-204ENST00000517554 ARHGAP23Q9P227 1491 aa31.65■■■□□ 2.66
MTCL1-204ENST00000517554 POLR1AO95602 1720 aaPredicted RBP31.63■■■□□ 2.65
MTCL1-204ENST00000517554 SLIT1O75093 1534 aa31.63■■■□□ 2.65
MTCL1-204ENST00000517554 KDM5AP29375 1690 aaKnown RBP31.62■■■□□ 2.65
MTCL1-204ENST00000517554 ADGRB3O60242 1522 aa31.62■■■□□ 2.65
MTCL1-204ENST00000517554 LTKP29376 864 aa31.61■■■□□ 2.65
MTCL1-204ENST00000517554 STAG3Q9UJ98 1225 aa31.6■■■□□ 2.65
MTCL1-204ENST00000517554 SLC4A1APQ9BWU0 796 aaKnown RBP31.6■■■□□ 2.65
MTCL1-204ENST00000517554 TMEM2Q9UHN6 1383 aa31.59■■■□□ 2.65
MTCL1-204ENST00000517554 MED14O60244 1454 aa31.59■■■□□ 2.65
MTCL1-204ENST00000517554 RAB3GAP2Q9H2M9 1393 aa31.59■■■□□ 2.65
MTCL1-204ENST00000517554 SPHKAPQ2M3C7 1700 aa31.57■■■□□ 2.64
MTCL1-204ENST00000517554 TMEM131LA2VDJ0 1609 aa31.56■■■□□ 2.64
MTCL1-204ENST00000517554 NPHP4O75161 1426 aaPredicted RBP31.55■■■□□ 2.64
MTCL1-204ENST00000517554 SCAF11Q99590 1463 aaKnown RBP31.55■■■□□ 2.64
MTCL1-204ENST00000517554 TXNDC2Q86VQ3 553 aa31.54■■■□□ 2.64
MTCL1-204ENST00000517554 FOXD1Q16676 465 aa31.51■■■□□ 2.64
MTCL1-204ENST00000517554 MPHOSPH9Q99550 1183 aa31.51■■■□□ 2.64
MTCL1-204ENST00000517554 MYO5BQ9ULV0 1848 aa31.51■■■□□ 2.64
MTCL1-204ENST00000517554 TRPM2O94759 1503 aa31.51■■■□□ 2.63
MTCL1-204ENST00000517554 LTBP4Q8N2S1 1624 aa31.5■■■□□ 2.63
MTCL1-204ENST00000517554 ZNF335Q9H4Z2 1342 aaPredicted RBP31.5■■■□□ 2.63
MTCL1-204ENST00000517554 CHGAP10645 457 aaKnown RBP31.48■■■□□ 2.63
MTCL1-204ENST00000517554 IQGAP1P46940 1657 aa31.48■■■□□ 2.63
MTCL1-204ENST00000517554 ZFYVE9O95405 1425 aa31.48■■■□□ 2.63
MTCL1-204ENST00000517554 EID1Q9Y6B2 187 aa31.47■■■□□ 2.63
MTCL1-204ENST00000517554 CLTCL1P53675 1640 aa31.47■■■□□ 2.63
MTCL1-204ENST00000517554 CERKQ8TCT0 537 aa31.44■■■□□ 2.62
MTCL1-204ENST00000517554 RIMS2Q9UQ26 1411 aa31.43■■■□□ 2.62
MTCL1-204ENST00000517554 ACIN1Q9UKV3 1341 aaKnown RBP31.42■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms