RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 CEP170BQ9Y4F5 1589 aaPredicted RBP13.32□□□□□ -0.28
CTNNA1-203ENST00000517534 ADGBQ8N7X0 1667 aa13.32□□□□□ -0.28
CTNNA1-203ENST00000517534 ILDR2Q71H61 639 aa13.32□□□□□ -0.28
CTNNA1-203ENST00000517534 A2ML1A8K2U0 1454 aa13.31□□□□□ -0.28
CTNNA1-203ENST00000517534 TSPY4P0CV99 314 aa13.31□□□□□ -0.28
CTNNA1-203ENST00000517534 TSPY10P0CW01 314 aa13.31□□□□□ -0.28
CTNNA1-203ENST00000517534 WASHC2CQ9Y4E1 1318 aa13.31□□□□□ -0.28
CTNNA1-203ENST00000517534 MYO3AQ8NEV4 1616 aa13.31□□□□□ -0.28
CTNNA1-203ENST00000517534 TNRQ92752 1358 aa13.31□□□□□ -0.28
CTNNA1-203ENST00000517534 DISP3Q9P2K9 1392 aa13.31□□□□□ -0.28
CTNNA1-203ENST00000517534 KANK4Q5T7N3 995 aaPredicted RBP13.3□□□□□ -0.28
CTNNA1-203ENST00000517534 VPS8Q8N3P4 1428 aa13.3□□□□□ -0.28
CTNNA1-203ENST00000517534 LRRC9Q6ZRR7 1453 aa13.29□□□□□ -0.28
CTNNA1-203ENST00000517534 ZNF142P52746 1687 aaPredicted RBP13.29□□□□□ -0.28
CTNNA1-203ENST00000517534 PIAS4Q8N2W9 510 aaPredicted RBP13.29□□□□□ -0.28
CTNNA1-203ENST00000517534 PZPP20742 1482 aa13.29□□□□□ -0.28
CTNNA1-203ENST00000517534 UBAP1LF5GYI3 381 aa13.28□□□□□ -0.28
CTNNA1-203ENST00000517534 MIA2Q96PC5 1412 aa13.27□□□□□ -0.29
CTNNA1-203ENST00000517534 ARHGEF5Q12774 1597 aa13.27□□□□□ -0.29
CTNNA1-203ENST00000517534 DNMT1P26358 1616 aaKnown RBP13.27□□□□□ -0.29
CTNNA1-203ENST00000517534 THEMISQ8N1K5 641 aaPredicted RBP13.26□□□□□ -0.29
CTNNA1-203ENST00000517534 KDM5DQ9BY66 1539 aa13.26□□□□□ -0.29
CTNNA1-203ENST00000517534 FAM135AQ9P2D6 1515 aa13.26□□□□□ -0.29
CTNNA1-203ENST00000517534 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.25□□□□□ -0.29
CTNNA1-203ENST00000517534 ANKLE2Q86XL3 938 aa13.24□□□□□ -0.29
CTNNA1-203ENST00000517534 MAP3K1Q13233 1512 aa13.23□□□□□ -0.29
CTNNA1-203ENST00000517534 SOCS7O14512 581 aa13.22□□□□□ -0.29
CTNNA1-203ENST00000517534 NEURL4Q96JN8 1562 aa13.22□□□□□ -0.29
CTNNA1-203ENST00000517534 NLRP1Q9C000 1473 aa13.22□□□□□ -0.29
CTNNA1-203ENST00000517534 SHANK2Q9UPX8 1470 aa13.21□□□□□ -0.3
CTNNA1-203ENST00000517534 MYOM3Q5VTT5 1437 aa13.21□□□□□ -0.3
CTNNA1-203ENST00000517534 MAST1Q9Y2H9 1570 aa13.2□□□□□ -0.3
CTNNA1-203ENST00000517534 ABCC3O15438 1527 aa13.2□□□□□ -0.3
CTNNA1-203ENST00000517534 MED14O60244 1454 aa13.19□□□□□ -0.3
CTNNA1-203ENST00000517534 NPHP4O75161 1426 aaPredicted RBP13.18□□□□□ -0.3
CTNNA1-203ENST00000517534 UGGT1Q9NYU2 1555 aa13.18□□□□□ -0.3
CTNNA1-203ENST00000517534 CPS1P31327 1500 aa13.18□□□□□ -0.3
CTNNA1-203ENST00000517534 RNF17Q9BXT8 1623 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-203ENST00000517534 TOM1O60784 492 aa13.17□□□□□ -0.3
CTNNA1-203ENST00000517534 ERVK-7P63135 1459 aa13.16□□□□□ -0.3
CTNNA1-203ENST00000517534 SPATA31D1Q6ZQQ2 1576 aa13.16□□□□□ -0.3
CTNNA1-203ENST00000517534 VWDEQ8N2E2 1590 aa13.16□□□□□ -0.3
CTNNA1-203ENST00000517534 ABCC5O15440 1437 aa13.16□□□□□ -0.3
CTNNA1-203ENST00000517534 HSPA1LP34931 641 aa13.16□□□□□ -0.3
CTNNA1-203ENST00000517534 PIP4K2BP78356 416 aa13.16□□□□□ -0.3
CTNNA1-203ENST00000517534 MROH1Q8NDA8 1641 aa13.16□□□□□ -0.3
CTNNA1-203ENST00000517534 RRP7BPQ9NSQ0 103 aa13.15□□□□□ -0.3
CTNNA1-203ENST00000517534 KIF15Q9NS87 1388 aa13.15□□□□□ -0.3
CTNNA1-203ENST00000517534 DUOX2Q9NRD8 1548 aa13.13□□□□□ -0.31
CTNNA1-203ENST00000517534 KCNA4P22459 653 aa13.13□□□□□ -0.31
CTNNA1-203ENST00000517534 LTKP29376 864 aa13.13□□□□□ -0.31
CTNNA1-203ENST00000517534 DEPDC5O75140 1603 aa13.13□□□□□ -0.31
CTNNA1-203ENST00000517534 ARHGAP31Q2M1Z3 1444 aa13.13□□□□□ -0.31
CTNNA1-203ENST00000517534 POLR1AO95602 1720 aaPredicted RBP13.12□□□□□ -0.31
CTNNA1-203ENST00000517534 EIF2AK4Q9P2K8 1649 aaKnown RBP13.12□□□□□ -0.31
CTNNA1-203ENST00000517534 SCAF1Q9H7N4 1312 aaKnown RBP13.12□□□□□ -0.31
CTNNA1-203ENST00000517534 ERBINQ96RT1 1412 aa13.11□□□□□ -0.31
CTNNA1-203ENST00000517534 ZC3H13Q5T200 1668 aaKnown RBP13.1□□□□□ -0.31
CTNNA1-203ENST00000517534 APLP2Q06481 763 aa13.1□□□□□ -0.31
CTNNA1-203ENST00000517534 TXNDC2Q86VQ3 553 aa13.1□□□□□ -0.31
CTNNA1-203ENST00000517534 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.1□□□□□ -0.315e-8■□□□□ 9.2
CTNNA1-203ENST00000517534 DAPK1P53355 1430 aa13.1□□□□□ -0.31
CTNNA1-203ENST00000517534 ALKQ9UM73 1620 aa13.1□□□□□ -0.31
CTNNA1-203ENST00000517534 LRRC7Q96NW7 1537 aa13.09□□□□□ -0.31
CTNNA1-203ENST00000517534 FGD6Q6ZV73 1430 aa13.09□□□□□ -0.31
CTNNA1-203ENST00000517534 CHIC2Q9UKJ5 165 aa13.09□□□□□ -0.31
CTNNA1-203ENST00000517534 ARHGAP23Q9P227 1491 aa13.09□□□□□ -0.31
CTNNA1-203ENST00000517534 SCAF11Q99590 1463 aaKnown RBP13.08□□□□□ -0.32
CTNNA1-203ENST00000517534 PRDM15P57071 1507 aaPredicted RBP13.08□□□□□ -0.32
CTNNA1-203ENST00000517534 IDI1Q13907 227 aa13.07□□□□□ -0.32
CTNNA1-203ENST00000517534 SLIT1O75093 1534 aa13.07□□□□□ -0.32
CTNNA1-203ENST00000517534 PTPN23Q9H3S7 1636 aa13.06□□□□□ -0.32
CTNNA1-203ENST00000517534 IQGAP1P46940 1657 aa13.06□□□□□ -0.32
CTNNA1-203ENST00000517534 ANKRD30AQ9BXX3 1397 aa13.06□□□□□ -0.32
CTNNA1-203ENST00000517534 TMEM2Q9UHN6 1383 aa13.06□□□□□ -0.32
CTNNA1-203ENST00000517534 EID1Q9Y6B2 187 aa13.05□□□□□ -0.32
CTNNA1-203ENST00000517534 KANK1Q14678 1352 aa13.05□□□□□ -0.32
CTNNA1-203ENST00000517534 CEP152O94986 1710 aa13.05□□□□□ -0.32
CTNNA1-203ENST00000517534 UBR1Q8IWV7 1749 aa13.04□□□□□ -0.32
CTNNA1-203ENST00000517534 STRCP1A6NGW2 1772 aa13.04□□□□□ -0.32
CTNNA1-203ENST00000517534 LMTK2Q8IWU2 1503 aa13.03□□□□□ -0.32
CTNNA1-203ENST00000517534 NOS1P29475 1434 aa13.02□□□□□ -0.33
CTNNA1-203ENST00000517534 STAG3Q9UJ98 1225 aa13.01□□□□□ -0.33
CTNNA1-203ENST00000517534 MED1Q15648 1581 aaPredicted RBP13.01□□□□□ -0.33
CTNNA1-203ENST00000517534 CFAP65Q6ZU64 1925 aaKnown RBP13.01□□□□□ -0.33
CTNNA1-203ENST00000517534 CROCC2H7BZ55 1655 aa13□□□□□ -0.33
CTNNA1-203ENST00000517534 ADGRL2O95490 1459 aa13□□□□□ -0.33
CTNNA1-203ENST00000517534 KCNA6P17658 529 aa13□□□□□ -0.33
CTNNA1-203ENST00000517534 SLC26A8Q96RN1 970 aa12.99□□□□□ -0.33
CTNNA1-203ENST00000517534 SLC52A1Q9NWF4 448 aa12.99□□□□□ -0.33
CTNNA1-203ENST00000517534 PIK3C2BO00750 1634 aa12.99□□□□□ -0.33
CTNNA1-203ENST00000517534 FAM50AQ14320 339 aaKnown RBP12.98□□□□□ -0.33
CTNNA1-203ENST00000517534 SYNMO15061 1565 aa12.98□□□□□ -0.33
CTNNA1-203ENST00000517534 EFCAB6Q5THR3 1501 aa12.98□□□□□ -0.33
CTNNA1-203ENST00000517534 TMEM94Q12767 1356 aa12.97□□□□□ -0.33
CTNNA1-203ENST00000517534 ANKRD50Q9ULJ7 1429 aa12.96□□□□□ -0.33
CTNNA1-203ENST00000517534 TET3O43151 1660 aa12.96□□□□□ -0.33
CTNNA1-203ENST00000517534 FAM135BQ49AJ0 1406 aa12.96□□□□□ -0.34
CTNNA1-203ENST00000517534 PPP4R3CPQ6ZMV5 832 aa12.95□□□□□ -0.34
CTNNA1-203ENST00000517534 RBM33Q96EV2 1170 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms