RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 HFM1A2PYH4 1435 aa8.05□□□□□ -1.12
SCARNA16.4-201ENST00000516956 AGLP35573 1532 aa8.05□□□□□ -1.12
SCARNA16.4-201ENST00000516956 NUP155O75694 1391 aa8.04□□□□□ -1.12
SCARNA16.4-201ENST00000516956 NAIPQ13075 1403 aa8.03□□□□□ -1.12
SCARNA16.4-201ENST00000516956 EIF2AK4Q9P2K8 1649 aaKnown RBP8.03□□□□□ -1.12
SCARNA16.4-201ENST00000516956 AEBP2Q6ZN18 517 aaPredicted RBP8.03□□□□□ -1.12
SCARNA16.4-201ENST00000516956 CNTLNQ9NXG0 1405 aa8.03□□□□□ -1.12
SCARNA16.4-201ENST00000516956 HRCP23327 699 aa8.02□□□□□ -1.13
SCARNA16.4-201ENST00000516956 SLC4A1APQ9BWU0 796 aaKnown RBP8.02□□□□□ -1.13
SCARNA16.4-201ENST00000516956 GCC2Q8IWJ2 1684 aa8.02□□□□□ -1.13
SCARNA16.4-201ENST00000516956 RAB3GAP2Q9H2M9 1393 aa8.01□□□□□ -1.13
SCARNA16.4-201ENST00000516956 BCORL1Q5H9F3 1711 aa8□□□□□ -1.13
SCARNA16.4-201ENST00000516956 KDM5DQ9BY66 1539 aa7.99□□□□□ -1.13
SCARNA16.4-201ENST00000516956 FAM135AQ9P2D6 1515 aa7.99□□□□□ -1.13
SCARNA16.4-201ENST00000516956 ZMYM3Q14202 1370 aa7.98□□□□□ -1.13
SCARNA16.4-201ENST00000516956 FER1L4A9Z1Z3 1794 aa7.98□□□□□ -1.13
SCARNA16.4-201ENST00000516956 PKD2Q13563 968 aa7.98□□□□□ -1.13
SCARNA16.4-201ENST00000516956 STAG3Q9UJ98 1225 aa7.98□□□□□ -1.13
SCARNA16.4-201ENST00000516956 RNF17Q9BXT8 1623 aaKnown RBP7.98□□□□□ -1.13
SCARNA16.4-201ENST00000516956 CEBPAP49715 358 aaPredicted RBP7.97□□□□□ -1.13
SCARNA16.4-201ENST00000516956 MPHOSPH9Q99550 1183 aa7.97□□□□□ -1.13
SCARNA16.4-201ENST00000516956 PRDM15P57071 1507 aaPredicted RBP7.97□□□□□ -1.13
SCARNA16.4-201ENST00000516956 UNC13BO14795 1591 aa7.97□□□□□ -1.13
SCARNA16.4-201ENST00000516956 MADDQ8WXG6 1647 aa7.96□□□□□ -1.13
SCARNA16.4-201ENST00000516956 CLTCQ00610 1675 aaKnown RBP7.96□□□□□ -1.13
SCARNA16.4-201ENST00000516956 ZC3H13Q5T200 1668 aaKnown RBP7.96□□□□□ -1.13
SCARNA16.4-201ENST00000516956 RIMS1Q86UR5 1692 aaKnown RBP7.96□□□□□ -1.13
SCARNA16.4-201ENST00000516956 KDM4FA0A1W2PPD8 638 aa7.96□□□□□ -1.14
SCARNA16.4-201ENST00000516956 CHGAP10645 457 aaKnown RBP7.96□□□□□ -1.14
SCARNA16.4-201ENST00000516956 ABCC3O15438 1527 aa7.96□□□□□ -1.14
SCARNA16.4-201ENST00000516956 ADAMTSL3P82987 1691 aa7.95□□□□□ -1.14
SCARNA16.4-201ENST00000516956 PTPRMP28827 1452 aa7.95□□□□□ -1.14
SCARNA16.4-201ENST00000516956 DEPDC5O75140 1603 aa7.95□□□□□ -1.14
SCARNA16.4-201ENST00000516956 SIGLEC1Q9BZZ2 1709 aa7.95□□□□□ -1.14
SCARNA16.4-201ENST00000516956 IQGAP3Q86VI3 1631 aa7.94□□□□□ -1.14
SCARNA16.4-201ENST00000516956 FBXO31Q5XUX0 539 aaPredicted RBP7.94□□□□□ -1.14
SCARNA16.4-201ENST00000516956 CCER1Q8TC90 406 aaPredicted RBP7.94□□□□□ -1.14
SCARNA16.4-201ENST00000516956 TNRQ92752 1358 aa7.94□□□□□ -1.14
SCARNA16.4-201ENST00000516956 LMTK2Q8IWU2 1503 aa7.93□□□□□ -1.14
SCARNA16.4-201ENST00000516956 CAMSAP1Q5T5Y3 1602 aa7.93□□□□□ -1.14
SCARNA16.4-201ENST00000516956 MROH2AA6NES4 1674 aa7.93□□□□□ -1.14
SCARNA16.4-201ENST00000516956 TET3O43151 1660 aa7.93□□□□□ -1.14
SCARNA16.4-201ENST00000516956 CEP152O94986 1710 aa7.93□□□□□ -1.14
SCARNA16.4-201ENST00000516956 SLC52A1Q9NWF4 448 aa7.93□□□□□ -1.14
SCARNA16.4-201ENST00000516956 ARHGAP31Q2M1Z3 1444 aa7.93□□□□□ -1.14
SCARNA16.4-201ENST00000516956 PZPP20742 1482 aa7.93□□□□□ -1.14
SCARNA16.4-201ENST00000516956 RPRD2Q5VT52 1461 aaKnown RBP7.93□□□□□ -1.14
SCARNA16.4-201ENST00000516956 MROH1Q8NDA8 1641 aa7.92□□□□□ -1.14
SCARNA16.4-201ENST00000516956 HDGFP51858 240 aaKnown RBP7.92□□□□□ -1.14
SCARNA16.4-201ENST00000516956 FOXD1Q16676 465 aa7.92□□□□□ -1.14
SCARNA16.4-201ENST00000516956 NPATQ14207 1427 aa7.92□□□□□ -1.14
SCARNA16.4-201ENST00000516956 UHRF1BP1Q6BDS2 1440 aa7.92□□□□□ -1.14
SCARNA16.4-201ENST00000516956 EFCAB6Q5THR3 1501 aa7.92□□□□□ -1.14
SCARNA16.4-201ENST00000516956 VWDEQ8N2E2 1590 aa7.92□□□□□ -1.14
SCARNA16.4-201ENST00000516956 ZNF326Q5BKZ1 582 aaKnown RBP7.91□□□□□ -1.14
SCARNA16.4-201ENST00000516956 THEMISQ8N1K5 641 aaPredicted RBP7.91□□□□□ -1.14
SCARNA16.4-201ENST00000516956 C3P01024 1663 aa7.9□□□□□ -1.14
SCARNA16.4-201ENST00000516956 ERVK-7P63135 1459 aa7.9□□□□□ -1.14
SCARNA16.4-201ENST00000516956 CCDC144AA2RUR9 1427 aa7.9□□□□□ -1.14
SCARNA16.4-201ENST00000516956 BCANQ96GW7 911 aa7.9□□□□□ -1.14
SCARNA16.4-201ENST00000516956 PPP1R15AO75807 674 aaPredicted RBP7.89□□□□□ -1.15
SCARNA16.4-201ENST00000516956 NEUROD1Q13562 356 aa7.89□□□□□ -1.15
SCARNA16.4-201ENST00000516956 EID1Q9Y6B2 187 aa7.89□□□□□ -1.15
SCARNA16.4-201ENST00000516956 NLRP1Q9C000 1473 aa7.88□□□□□ -1.15
SCARNA16.4-201ENST00000516956 IDI1Q13907 227 aa7.88□□□□□ -1.15
SCARNA16.4-201ENST00000516956 E9PCH4 1651 aa7.88□□□□□ -1.15
SCARNA16.4-201ENST00000516956 PREX1Q8TCU6 1659 aa7.87□□□□□ -1.15
SCARNA16.4-201ENST00000516956 RGL3Q3MIN7 710 aa7.87□□□□□ -1.15
SCARNA16.4-201ENST00000516956 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.87□□□□□ -1.15
SCARNA16.4-201ENST00000516956 SPATA31D1Q6ZQQ2 1576 aa7.87□□□□□ -1.15
SCARNA16.4-201ENST00000516956 CFAP65Q6ZU64 1925 aaKnown RBP7.87□□□□□ -1.15
SCARNA16.4-201ENST00000516956 NOS1P29475 1434 aa7.86□□□□□ -1.15
SCARNA16.4-201ENST00000516956 DHX57Q6P158 1386 aaKnown RBP7.86□□□□□ -1.15
SCARNA16.4-201ENST00000516956 ANKLE2Q86XL3 938 aa7.86□□□□□ -1.15
SCARNA16.4-201ENST00000516956 A2ML1A8K2U0 1454 aa7.86□□□□□ -1.15
SCARNA16.4-201ENST00000516956 SPHKAPQ2M3C7 1700 aa7.86□□□□□ -1.15
SCARNA16.4-201ENST00000516956 PTPRTO14522 1441 aa7.86□□□□□ -1.15
SCARNA16.4-201ENST00000516956 CLSPNQ9HAW4 1339 aa7.85□□□□□ -1.15
SCARNA16.4-201ENST00000516956 TRPM2O94759 1503 aa7.85□□□□□ -1.15
SCARNA16.4-201ENST00000516956 TONSLQ96HA7 1378 aa7.84□□□□□ -1.15
SCARNA16.4-201ENST00000516956 ANKRD30BQ9BXX2 1392 aa7.84□□□□□ -1.15
SCARNA16.4-201ENST00000516956 UGGT1Q9NYU2 1555 aa7.84□□□□□ -1.15
SCARNA16.4-201ENST00000516956 SETD1BQ9UPS6 1966 aaKnown RBP7.84□□□□□ -1.15
SCARNA16.4-201ENST00000516956 RPGRIP1LQ68CZ1 1315 aa7.84□□□□□ -1.15
SCARNA16.4-201ENST00000516956 VGFO15240 615 aaPredicted RBP7.84□□□□□ -1.15
SCARNA16.4-201ENST00000516956 TXNDC2Q86VQ3 553 aa7.84□□□□□ -1.15
SCARNA16.4-201ENST00000516956 DMRT2Q9Y5R5 561 aa7.84□□□□□ -1.15
SCARNA16.4-201ENST00000516956 MYO3AQ8NEV4 1616 aa7.84□□□□□ -1.15
SCARNA16.4-201ENST00000516956 HSPA2P54652 639 aa7.83□□□□□ -1.16
SCARNA16.4-201ENST00000516956 KDM2AQ9Y2K7 1162 aa7.83□□□□□ -1.16
SCARNA16.4-201ENST00000516956 SYNMO15061 1565 aa7.83□□□□□ -1.16
SCARNA16.4-201ENST00000516956 CEP170BQ9Y4F5 1589 aaPredicted RBP7.83□□□□□ -1.16
SCARNA16.4-201ENST00000516956 DCAF11Q8TEB1 546 aa7.82□□□□□ -1.16
SCARNA16.4-201ENST00000516956 STAC3Q96MF2 364 aa7.82□□□□□ -1.16
SCARNA16.4-201ENST00000516956 SIN3AQ96ST3 1273 aa7.82□□□□□ -1.16
SCARNA16.4-201ENST00000516956 ADGRB3O60242 1522 aa7.82□□□□□ -1.16
SCARNA16.4-201ENST00000516956 PIK3C2BO00750 1634 aa7.81□□□□□ -1.16
SCARNA16.4-201ENST00000516956 PLA2R1Q13018 1463 aa7.81□□□□□ -1.16
SCARNA16.4-201ENST00000516956 RIMS2Q9UQ26 1411 aa7.81□□□□□ -1.16
SCARNA16.4-201ENST00000516956 KIF1BO60333 1816 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms