RNA–Protein interactions for RNA: ENST00000515809.1

RBM47-215, Transcript of RNA binding motif protein 47, humanhuman

TSL 2

Gene RBM47, Length 229 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-215ENST00000515809 NAIPQ13075 1403 aa21.34■■□□□ 1.01
RBM47-215ENST00000515809 ADAMTSL3P82987 1691 aa21.33■■□□□ 1
RBM47-215ENST00000515809 MROH1Q8NDA8 1641 aa21.32■■□□□ 1
RBM47-215ENST00000515809 MADDQ8WXG6 1647 aa21.31■■□□□ 1
RBM47-215ENST00000515809 KIF3BO15066 747 aa21.3■■□□□ 1
RBM47-215ENST00000515809 MROH2AA6NES4 1674 aa21.3■■□□□ 1
RBM47-215ENST00000515809 RIMS1Q86UR5 1692 aaKnown RBP21.3■■□□□ 1
RBM47-215ENST00000515809 KDM5DQ9BY66 1539 aa21.29■■□□□ 1
RBM47-215ENST00000515809 CEP152O94986 1710 aa21.29■■□□□ 1
RBM47-215ENST00000515809 CLTCQ00610 1675 aaKnown RBP21.29■■□□□ 1
RBM47-215ENST00000515809 IQGAP3Q86VI3 1631 aa21.26■□□□□ 0.99
RBM47-215ENST00000515809 MLECQ14165 292 aa21.25■□□□□ 0.99
RBM47-215ENST00000515809 SETD5Q9C0A6 1442 aa21.25■□□□□ 0.99
RBM47-215ENST00000515809 KANK1Q14678 1352 aa21.24■□□□□ 0.99
RBM47-215ENST00000515809 CNTLNQ9NXG0 1405 aa21.24■□□□□ 0.99
RBM47-215ENST00000515809 CAMSAP1Q5T5Y3 1602 aa21.24■□□□□ 0.99
RBM47-215ENST00000515809 VWDEQ8N2E2 1590 aa21.23■□□□□ 0.99
RBM47-215ENST00000515809 GGT6Q6P531 493 aa21.23■□□□□ 0.99
RBM47-215ENST00000515809 ESF1Q9H501 851 aaKnown RBP21.22■□□□□ 0.99
RBM47-215ENST00000515809 ABCC3O15438 1527 aa21.22■□□□□ 0.99
RBM47-215ENST00000515809 TET3O43151 1660 aa21.21■□□□□ 0.99
RBM47-215ENST00000515809 PPP6R1Q9UPN7 881 aa21.21■□□□□ 0.99
RBM47-215ENST00000515809 ACIN1Q9UKV3 1341 aaKnown RBP21.21■□□□□ 0.99
RBM47-215ENST00000515809 C3P01024 1663 aa21.19■□□□□ 0.98
RBM47-215ENST00000515809 LMTK2Q8IWU2 1503 aa21.19■□□□□ 0.98
RBM47-215ENST00000515809 RAB3GAP2Q9H2M9 1393 aa21.18■□□□□ 0.98
RBM47-215ENST00000515809 EFCAB6Q5THR3 1501 aa21.16■□□□□ 0.98
RBM47-215ENST00000515809 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.16■□□□□ 0.98
RBM47-215ENST00000515809 WASHC2CQ9Y4E1 1318 aa21.15■□□□□ 0.98
RBM47-215ENST00000515809 NUP155O75694 1391 aa21.13■□□□□ 0.97
RBM47-215ENST00000515809 PTPRMP28827 1452 aa21.11■□□□□ 0.97
RBM47-215ENST00000515809 E9PCH4 1651 aa21.11■□□□□ 0.97
RBM47-215ENST00000515809 PREX1Q8TCU6 1659 aa21.1■□□□□ 0.97
RBM47-215ENST00000515809 TRIM52Q96A61 297 aa21.1■□□□□ 0.97
RBM47-215ENST00000515809 PZPP20742 1482 aa21.09■□□□□ 0.97
RBM47-215ENST00000515809 RPRD2Q5VT52 1461 aaKnown RBP21.08■□□□□ 0.97
RBM47-215ENST00000515809 CFAP65Q6ZU64 1925 aaKnown RBP21.08■□□□□ 0.96
RBM47-215ENST00000515809 ARHGAP31Q2M1Z3 1444 aa21.07■□□□□ 0.96
RBM47-215ENST00000515809 KDM4FA0A1W2PPD8 638 aa21.07■□□□□ 0.96
RBM47-215ENST00000515809 HRCP23327 699 aa21.07■□□□□ 0.96
RBM47-215ENST00000515809 PCGF6Q9BYE7 350 aa21.07■□□□□ 0.96
RBM47-215ENST00000515809 SPHKAPQ2M3C7 1700 aa21.07■□□□□ 0.96
RBM47-215ENST00000515809 ZMYM3Q14202 1370 aa21.06■□□□□ 0.96
RBM47-215ENST00000515809 NPATQ14207 1427 aa21.04■□□□□ 0.96
RBM47-215ENST00000515809 SPATA31D1Q6ZQQ2 1576 aa21.03■□□□□ 0.96
RBM47-215ENST00000515809 ERVK-7P63135 1459 aa21.01■□□□□ 0.95
RBM47-215ENST00000515809 MYO3AQ8NEV4 1616 aa21.01■□□□□ 0.95
RBM47-215ENST00000515809 SLC4A1APQ9BWU0 796 aaKnown RBP21■□□□□ 0.95
RBM47-215ENST00000515809 SETD1BQ9UPS6 1966 aaKnown RBP20.99■□□□□ 0.95
RBM47-215ENST00000515809 ZNF142P52746 1687 aaPredicted RBP20.98■□□□□ 0.95
RBM47-215ENST00000515809 PLPPR3Q6T4P5 718 aa20.97■□□□□ 0.95
RBM47-215ENST00000515809 SYNMO15061 1565 aa20.96■□□□□ 0.95
RBM47-215ENST00000515809 TRPM2O94759 1503 aa20.95■□□□□ 0.94
RBM47-215ENST00000515809 CEBPAP49715 358 aaPredicted RBP20.94■□□□□ 0.94
RBM47-215ENST00000515809 MPHOSPH9Q99550 1183 aa20.94■□□□□ 0.94
RBM47-215ENST00000515809 TNRQ92752 1358 aa20.94■□□□□ 0.94
RBM47-215ENST00000515809 PKD2Q13563 968 aa20.93■□□□□ 0.94
RBM47-215ENST00000515809 NOS1P29475 1434 aa20.93■□□□□ 0.94
RBM47-215ENST00000515809 PIK3C2BO00750 1634 aa20.93■□□□□ 0.94
RBM47-215ENST00000515809 NLRP1Q9C000 1473 aa20.92■□□□□ 0.94
RBM47-215ENST00000515809 KDM5AP29375 1690 aaKnown RBP20.91■□□□□ 0.94
RBM47-215ENST00000515809 CEP170BQ9Y4F5 1589 aaPredicted RBP20.91■□□□□ 0.94
RBM47-215ENST00000515809 KIF1BO60333 1816 aa20.9■□□□□ 0.94
RBM47-215ENST00000515809 UHRF1BP1Q6BDS2 1440 aa20.9■□□□□ 0.94
RBM47-215ENST00000515809 FBXO31Q5XUX0 539 aaPredicted RBP20.89■□□□□ 0.93
RBM47-215ENST00000515809 PTPRTO14522 1441 aa20.88■□□□□ 0.93
RBM47-215ENST00000515809 CLTCL1P53675 1640 aa20.88■□□□□ 0.93
RBM47-215ENST00000515809 UBR1Q8IWV7 1749 aa20.87■□□□□ 0.93
RBM47-215ENST00000515809 UGGT1Q9NYU2 1555 aa20.85■□□□□ 0.93
RBM47-215ENST00000515809 ADGRB3O60242 1522 aa20.85■□□□□ 0.93
RBM47-215ENST00000515809 A2ML1A8K2U0 1454 aa20.85■□□□□ 0.93
RBM47-215ENST00000515809 MYO5BQ9ULV0 1848 aa20.85■□□□□ 0.93
RBM47-215ENST00000515809 AEBP2Q6ZN18 517 aaPredicted RBP20.84■□□□□ 0.93
RBM47-215ENST00000515809 DHX57Q6P158 1386 aaKnown RBP20.84■□□□□ 0.93
RBM47-215ENST00000515809 CCDC144AA2RUR9 1427 aa20.83■□□□□ 0.93
RBM47-215ENST00000515809 FOXD1Q16676 465 aa20.81■□□□□ 0.92
RBM47-215ENST00000515809 SLC52A1Q9NWF4 448 aa20.81■□□□□ 0.92
RBM47-215ENST00000515809 PLA2R1Q13018 1463 aa20.81■□□□□ 0.92
RBM47-215ENST00000515809 TMEM131LA2VDJ0 1609 aa20.8■□□□□ 0.92
RBM47-215ENST00000515809 LMTK3Q96Q04 1460 aa20.8■□□□□ 0.92
RBM47-215ENST00000515809 ANKRD30BQ9BXX2 1392 aa20.77■□□□□ 0.92
RBM47-215ENST00000515809 POLR1AO95602 1720 aaPredicted RBP20.77■□□□□ 0.92
RBM47-215ENST00000515809 NEURL4Q96JN8 1562 aa20.76■□□□□ 0.91
RBM47-215ENST00000515809 STAG3Q9UJ98 1225 aa20.75■□□□□ 0.91
RBM47-215ENST00000515809 IDI1Q13907 227 aa20.73■□□□□ 0.91
RBM47-215ENST00000515809 IFT172Q9UG01 1749 aa20.7■□□□□ 0.9
RBM47-215ENST00000515809 PPLO60437 1756 aa20.7■□□□□ 0.9
RBM47-215ENST00000515809 SLIT1O75093 1534 aa20.7■□□□□ 0.9
RBM47-215ENST00000515809 CHGAP10645 457 aaKnown RBP20.69■□□□□ 0.9
RBM47-215ENST00000515809 THEMISQ8N1K5 641 aaPredicted RBP20.68■□□□□ 0.9
RBM47-215ENST00000515809 CLSPNQ9HAW4 1339 aa20.66■□□□□ 0.9
RBM47-215ENST00000515809 ARHGAP23Q9P227 1491 aa20.66■□□□□ 0.9
RBM47-215ENST00000515809 NEXMIFQ5QGS0 1516 aa20.65■□□□□ 0.9
RBM47-215ENST00000515809 SPATA31E1Q6ZUB1 1445 aa20.65■□□□□ 0.9
RBM47-215ENST00000515809 CCER1Q8TC90 406 aaPredicted RBP20.65■□□□□ 0.9
RBM47-215ENST00000515809 TMEM2Q9UHN6 1383 aa20.64■□□□□ 0.89
RBM47-215ENST00000515809 STRCQ7RTU9 1775 aa20.63■□□□□ 0.89
RBM47-215ENST00000515809 SCAF11Q99590 1463 aaKnown RBP20.62■□□□□ 0.89
RBM47-215ENST00000515809 IQGAP1P46940 1657 aa20.62■□□□□ 0.89
RBM47-215ENST00000515809 ZNF326Q5BKZ1 582 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms