RNA–Protein interactions for RNA: ENST00000515748.2

CSNK1A1-206, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-206ENST00000515748 RNF17Q9BXT8 1623 aaKnown RBP14.99□□□□□ -0.01
CSNK1A1-206ENST00000515748 ABCC1P33527 1531 aa14.99□□□□□ -0.01
CSNK1A1-206ENST00000515748 HNRNPMP52272 730 aaKnown RBP eCLIP14.99□□□□□ -0.012e-10■■■■■ 36.2
CSNK1A1-206ENST00000515748 ZNF777Q9ULD5 760 aaPredicted RBP14.99□□□□□ -0.01
CSNK1A1-206ENST00000515748 STRCP1A6NGW2 1772 aa14.98□□□□□ -0.01
CSNK1A1-206ENST00000515748 CDC42BPBQ9Y5S2 1711 aa14.97□□□□□ -0.01
CSNK1A1-206ENST00000515748 ZNF772Q68DY9 489 aaPredicted RBP14.97□□□□□ -0.01
CSNK1A1-206ENST00000515748 A2MP01023 1474 aa14.96□□□□□ -0.01
CSNK1A1-206ENST00000515748 CCDC18Q5T9S5 1454 aa14.95□□□□□ -0.02
CSNK1A1-206ENST00000515748 SAMD9LQ8IVG5 1584 aa14.95□□□□□ -0.02
CSNK1A1-206ENST00000515748 RXRBP28702 533 aa14.95□□□□□ -0.02
CSNK1A1-206ENST00000515748 ITSN2Q9NZM3 1697 aa14.94□□□□□ -0.02
CSNK1A1-206ENST00000515748 DEPDC5O75140 1603 aa14.94□□□□□ -0.02
CSNK1A1-206ENST00000515748 MIA2Q96PC5 1412 aa14.93□□□□□ -0.02
CSNK1A1-206ENST00000515748 FAM135AQ9P2D6 1515 aa14.93□□□□□ -0.02
CSNK1A1-206ENST00000515748 VPS8Q8N3P4 1428 aa14.92□□□□□ -0.02
CSNK1A1-206ENST00000515748 SYNMO15061 1565 aa14.91□□□□□ -0.02
CSNK1A1-206ENST00000515748 UGGT1Q9NYU2 1555 aa14.9□□□□□ -0.02
CSNK1A1-206ENST00000515748 JCADQ9P266 1359 aa14.9□□□□□ -0.02
CSNK1A1-206ENST00000515748 MEX3CQ5U5Q3 659 aaKnown RBP14.9□□□□□ -0.02
CSNK1A1-206ENST00000515748 IQGAP1P46940 1657 aa14.9□□□□□ -0.02
CSNK1A1-206ENST00000515748 PLXNC1O60486 1568 aa14.9□□□□□ -0.02
CSNK1A1-206ENST00000515748 NLRP1Q9C000 1473 aa14.89□□□□□ -0.03
CSNK1A1-206ENST00000515748 WASHC2CQ9Y4E1 1318 aa14.88□□□□□ -0.03
CSNK1A1-206ENST00000515748 ZRANB1Q9UGI0 708 aa14.87□□□□□ -0.03
CSNK1A1-206ENST00000515748 PREX2Q70Z35 1606 aa14.87□□□□□ -0.03
CSNK1A1-206ENST00000515748 PZPP20742 1482 aa14.87□□□□□ -0.03
CSNK1A1-206ENST00000515748 ATP7AQ04656 1500 aa14.87□□□□□ -0.03
CSNK1A1-206ENST00000515748 LRRIQ1Q96JM4 1722 aa14.86□□□□□ -0.03
CSNK1A1-206ENST00000515748 KIF3BO15066 747 aa14.85□□□□□ -0.03
CSNK1A1-206ENST00000515748 FOXD1Q16676 465 aa14.84□□□□□ -0.03
CSNK1A1-206ENST00000515748 SLAIN2Q9P270 581 aa14.84□□□□□ -0.03
CSNK1A1-206ENST00000515748 SPATA31A6Q5VVP1 1343 aa14.84□□□□□ -0.03
CSNK1A1-206ENST00000515748 TMEM94Q12767 1356 aa14.84□□□□□ -0.03
CSNK1A1-206ENST00000515748 KDM5DQ9BY66 1539 aa14.83□□□□□ -0.04
CSNK1A1-206ENST00000515748 LTKP29376 864 aa14.83□□□□□ -0.04
CSNK1A1-206ENST00000515748 TXNDC2Q86VQ3 553 aa14.83□□□□□ -0.04
CSNK1A1-206ENST00000515748 RBM33Q96EV2 1170 aaKnown RBP14.83□□□□□ -0.04
CSNK1A1-206ENST00000515748 KIAA1107Q9UPP5 1409 aa14.83□□□□□ -0.04
CSNK1A1-206ENST00000515748 SYCP2Q9BX26 1530 aa14.82□□□□□ -0.04
CSNK1A1-206ENST00000515748 ROBO1Q9Y6N7 1651 aa14.82□□□□□ -0.04
CSNK1A1-206ENST00000515748 PROSER2Q86WR7 435 aaPredicted RBP14.82□□□□□ -0.04
CSNK1A1-206ENST00000515748 XIRP1Q702N8 1843 aaKnown RBP14.82□□□□□ -0.04
CSNK1A1-206ENST00000515748 DHX29Q7Z478 1369 aaKnown RBP14.82□□□□□ -0.04
CSNK1A1-206ENST00000515748 CDK12Q9NYV4 1490 aaPredicted RBP14.82□□□□□ -0.04
CSNK1A1-206ENST00000515748 MAP3K1Q13233 1512 aa14.82□□□□□ -0.04
CSNK1A1-206ENST00000515748 CFDP1Q9UEE9 299 aaPredicted RBP14.8□□□□□ -0.04
CSNK1A1-206ENST00000515748 LRP6O75581 1613 aa14.8□□□□□ -0.04
CSNK1A1-206ENST00000515748 NUTM2BA6NNL0 878 aaPredicted RBP14.79□□□□□ -0.04
CSNK1A1-206ENST00000515748 NUTM2EB1AL46 878 aaPredicted RBP14.79□□□□□ -0.04
CSNK1A1-206ENST00000515748 KCNA6P17658 529 aa14.79□□□□□ -0.04
CSNK1A1-206ENST00000515748 NUTM2DQ5VT03 806 aaPredicted RBP14.79□□□□□ -0.04
CSNK1A1-206ENST00000515748 NUTM2AQ8IVF1 878 aaPredicted RBP14.79□□□□□ -0.04
CSNK1A1-206ENST00000515748 INO80Q9ULG1 1556 aaPredicted RBP14.78□□□□□ -0.04
CSNK1A1-206ENST00000515748 TIAM1Q13009 1591 aa14.77□□□□□ -0.04
CSNK1A1-206ENST00000515748 EHBP1L1Q8N3D4 1523 aa14.77□□□□□ -0.04
CSNK1A1-206ENST00000515748 GPATCH8Q9UKJ3 1502 aaKnown RBP14.77□□□□□ -0.04
CSNK1A1-206ENST00000515748 ZC3H13Q5T200 1668 aaKnown RBP14.77□□□□□ -0.05
CSNK1A1-206ENST00000515748 SCAF11Q99590 1463 aaKnown RBP14.76□□□□□ -0.05
CSNK1A1-206ENST00000515748 CDC42BPAQ5VT25 1732 aa14.76□□□□□ -0.05
CSNK1A1-206ENST00000515748 EID1Q9Y6B2 187 aa14.76□□□□□ -0.05
CSNK1A1-206ENST00000515748 PLEKHH2Q8IVE3 1493 aa14.76□□□□□ -0.05
CSNK1A1-206ENST00000515748 LRRC9Q6ZRR7 1453 aa14.75□□□□□ -0.05
CSNK1A1-206ENST00000515748 PHLPP1O60346 1717 aa14.75□□□□□ -0.05
CSNK1A1-206ENST00000515748 MTUS2Q5JR59 1369 aa14.74□□□□□ -0.05
CSNK1A1-206ENST00000515748 QTRT2Q9H974 415 aaKnown RBP14.74□□□□□ -0.05
CSNK1A1-206ENST00000515748 SETBP1Q9Y6X0 1596 aa14.73□□□□□ -0.05
CSNK1A1-206ENST00000515748 AFF2P51816 1311 aa14.73□□□□□ -0.05
CSNK1A1-206ENST00000515748 RBM6P78332 1123 aaKnown RBP14.73□□□□□ -0.05
CSNK1A1-206ENST00000515748 ADGBQ8N7X0 1667 aa14.73□□□□□ -0.05
CSNK1A1-206ENST00000515748 FGD6Q6ZV73 1430 aa14.73□□□□□ -0.05
CSNK1A1-206ENST00000515748 ZNF644Q9H582 1327 aaPredicted RBP14.72□□□□□ -0.05
CSNK1A1-206ENST00000515748 RTEL1-TNFRSF6BF6WH68 1400 aa14.71□□□□□ -0.05
CSNK1A1-206ENST00000515748 MSH6P52701 1360 aa14.71□□□□□ -0.06
CSNK1A1-206ENST00000515748 RGS12O14924 1447 aa14.7□□□□□ -0.06
CSNK1A1-206ENST00000515748 SLC26A8Q96RN1 970 aa14.69□□□□□ -0.06
CSNK1A1-206ENST00000515748 NCOA2Q15596 1464 aa14.68□□□□□ -0.06
CSNK1A1-206ENST00000515748 ARHGAP23Q9P227 1491 aa14.68□□□□□ -0.06
CSNK1A1-206ENST00000515748 ATAD2Q6PL18 1390 aa14.67□□□□□ -0.06
CSNK1A1-206ENST00000515748 CCNB3Q8WWL7 1395 aa14.67□□□□□ -0.06
CSNK1A1-206ENST00000515748 COL16A1Q07092 1604 aaPredicted RBP14.66□□□□□ -0.06
CSNK1A1-206ENST00000515748 CCDC125Q86Z20 511 aa14.65□□□□□ -0.06
CSNK1A1-206ENST00000515748 NGLY1Q96IV0 654 aa14.65□□□□□ -0.06
CSNK1A1-206ENST00000515748 SLIT1O75093 1534 aa14.65□□□□□ -0.06
CSNK1A1-206ENST00000515748 PRDM15P57071 1507 aaPredicted RBP14.65□□□□□ -0.06
CSNK1A1-206ENST00000515748 MBD5Q9P267 1494 aa14.64□□□□□ -0.07
CSNK1A1-206ENST00000515748 ERVK-7P63135 1459 aa14.63□□□□□ -0.07
CSNK1A1-206ENST00000515748 C8orf37Q96NL8 207 aa14.63□□□□□ -0.07
CSNK1A1-206ENST00000515748 APLP2Q06481 763 aa14.62□□□□□ -0.07
CSNK1A1-206ENST00000515748 KANK4Q5T7N3 995 aaPredicted RBP14.62□□□□□ -0.07
CSNK1A1-206ENST00000515748 UBR1Q8IWV7 1749 aa14.62□□□□□ -0.07
CSNK1A1-206ENST00000515748 TMEM2Q9UHN6 1383 aa14.61□□□□□ -0.07
CSNK1A1-206ENST00000515748 STAG3Q9UJ98 1225 aa14.6□□□□□ -0.07
CSNK1A1-206ENST00000515748 RSPH4AQ5TD94 716 aa14.58□□□□□ -0.08
CSNK1A1-206ENST00000515748 BCANQ96GW7 911 aa14.58□□□□□ -0.08
CSNK1A1-206ENST00000515748 SHPRHQ149N8 1683 aa14.58□□□□□ -0.08
CSNK1A1-206ENST00000515748 MYOM3Q5VTT5 1437 aa14.58□□□□□ -0.08
CSNK1A1-206ENST00000515748 ABCC3O15438 1527 aa14.57□□□□□ -0.08
CSNK1A1-206ENST00000515748 CADPS2Q86UW7 1296 aa14.57□□□□□ -0.08
CSNK1A1-206ENST00000515748 NKTRP30414 1462 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms