RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 DUOX2Q9NRD8 1548 aa24.31■■□□□ 1.48
SERF1B-208ENST00000515588 PREX1Q8TCU6 1659 aa24.31■■□□□ 1.48
SERF1B-208ENST00000515588 NPATQ14207 1427 aa24.29■■□□□ 1.48
SERF1B-208ENST00000515588 UHRF1BP1Q6BDS2 1440 aa24.29■■□□□ 1.48
SERF1B-208ENST00000515588 PTPRKQ15262 1439 aa24.28■■□□□ 1.48
SERF1B-208ENST00000515588 RNF17Q9BXT8 1623 aaKnown RBP24.28■■□□□ 1.48
SERF1B-208ENST00000515588 WASHC2CQ9Y4E1 1318 aa24.27■■□□□ 1.48
SERF1B-208ENST00000515588 EIF2AK4Q9P2K8 1649 aaKnown RBP24.27■■□□□ 1.48
SERF1B-208ENST00000515588 ANKRD30AQ9BXX3 1397 aa24.27■■□□□ 1.48
SERF1B-208ENST00000515588 NCOA1Q15788 1441 aa24.27■■□□□ 1.48
SERF1B-208ENST00000515588 KDM5DQ9BY66 1539 aa24.26■■□□□ 1.47
SERF1B-208ENST00000515588 FAM135AQ9P2D6 1515 aa24.25■■□□□ 1.47
SERF1B-208ENST00000515588 MROH1Q8NDA8 1641 aa24.24■■□□□ 1.47
SERF1B-208ENST00000515588 ERBINQ96RT1 1412 aa24.24■■□□□ 1.47
SERF1B-208ENST00000515588 ADGRL2O95490 1459 aa24.24■■□□□ 1.47
SERF1B-208ENST00000515588 FBXO31Q5XUX0 539 aaPredicted RBP24.21■■□□□ 1.47
SERF1B-208ENST00000515588 ABCC3O15438 1527 aa24.2■■□□□ 1.46
SERF1B-208ENST00000515588 PZPP20742 1482 aa24.19■■□□□ 1.46
SERF1B-208ENST00000515588 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.16■■□□□ 1.46
SERF1B-208ENST00000515588 PRDM15P57071 1507 aaPredicted RBP24.15■■□□□ 1.46
SERF1B-208ENST00000515588 MYO3AQ8NEV4 1616 aa24.14■■□□□ 1.46
SERF1B-208ENST00000515588 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.14■■□□□ 1.45
SERF1B-208ENST00000515588 ZC3H13Q5T200 1668 aaKnown RBP24.13■■□□□ 1.45
SERF1B-208ENST00000515588 DEPDC5O75140 1603 aa24.13■■□□□ 1.45
SERF1B-208ENST00000515588 RRBP1Q9P2E9 1410 aaKnown RBP24.12■■□□□ 1.45
SERF1B-208ENST00000515588 ITGAEP38570 1179 aa24.12■■□□□ 1.45
SERF1B-208ENST00000515588 TNRQ92752 1358 aa24.12■■□□□ 1.45
SERF1B-208ENST00000515588 STRCQ7RTU9 1775 aa24.11■■□□□ 1.45
SERF1B-208ENST00000515588 ANKRD50Q9ULJ7 1429 aa24.11■■□□□ 1.45
SERF1B-208ENST00000515588 CEP152O94986 1710 aa24.11■■□□□ 1.45
SERF1B-208ENST00000515588 ROCK1Q13464 1354 aa24.1■■□□□ 1.45
SERF1B-208ENST00000515588 CEP170BQ9Y4F5 1589 aaPredicted RBP24.1■■□□□ 1.45
SERF1B-208ENST00000515588 ZNF142P52746 1687 aaPredicted RBP24.08■■□□□ 1.45
SERF1B-208ENST00000515588 CAMSAP1Q5T5Y3 1602 aa24.07■■□□□ 1.44
SERF1B-208ENST00000515588 A2ML1A8K2U0 1454 aa24.07■■□□□ 1.44
SERF1B-208ENST00000515588 VWDEQ8N2E2 1590 aa24.06■■□□□ 1.44
SERF1B-208ENST00000515588 KANK1Q14678 1352 aa24.05■■□□□ 1.44
SERF1B-208ENST00000515588 ERVK-7P63135 1459 aa24.05■■□□□ 1.44
SERF1B-208ENST00000515588 SPATA31D1Q6ZQQ2 1576 aa24.04■■□□□ 1.44
SERF1B-208ENST00000515588 ARHGAP31Q2M1Z3 1444 aa24.04■■□□□ 1.44
SERF1B-208ENST00000515588 LMTK2Q8IWU2 1503 aa24.02■■□□□ 1.44
SERF1B-208ENST00000515588 DMRT2Q9Y5R5 561 aa24.01■■□□□ 1.43
SERF1B-208ENST00000515588 NLRP1Q9C000 1473 aa24■■□□□ 1.43
SERF1B-208ENST00000515588 NCKAP5LQ9HCH0 1330 aa24■■□□□ 1.43
SERF1B-208ENST00000515588 CFAP65Q6ZU64 1925 aaKnown RBP23.99■■□□□ 1.43
SERF1B-208ENST00000515588 PLA2R1Q13018 1463 aa23.99■■□□□ 1.43
SERF1B-208ENST00000515588 PTPRTO14522 1441 aa23.98■■□□□ 1.43
SERF1B-208ENST00000515588 UNC13BO14795 1591 aa23.95■■□□□ 1.42
SERF1B-208ENST00000515588 PKD2Q13563 968 aa23.94■■□□□ 1.42
SERF1B-208ENST00000515588 EFCAB6Q5THR3 1501 aa23.94■■□□□ 1.42
SERF1B-208ENST00000515588 UGGT1Q9NYU2 1555 aa23.93■■□□□ 1.42
SERF1B-208ENST00000515588 THEMISQ8N1K5 641 aaPredicted RBP23.92■■□□□ 1.42
SERF1B-208ENST00000515588 NOS1P29475 1434 aa23.89■■□□□ 1.41
SERF1B-208ENST00000515588 NAIPQ13075 1403 aa23.88■■□□□ 1.41
SERF1B-208ENST00000515588 ILDR1Q86SU0 546 aaPredicted RBP23.88■■□□□ 1.41
SERF1B-208ENST00000515588 NUP155O75694 1391 aa23.87■■□□□ 1.41
SERF1B-208ENST00000515588 SYNMO15061 1565 aa23.86■■□□□ 1.41
SERF1B-208ENST00000515588 TET3O43151 1660 aa23.86■■□□□ 1.41
SERF1B-208ENST00000515588 RPRD2Q5VT52 1461 aaKnown RBP23.86■■□□□ 1.41
SERF1B-208ENST00000515588 IDI1Q13907 227 aa23.85■■□□□ 1.41
SERF1B-208ENST00000515588 ANKLE2Q86XL3 938 aa23.85■■□□□ 1.41
SERF1B-208ENST00000515588 NEURL4Q96JN8 1562 aa23.85■■□□□ 1.41
SERF1B-208ENST00000515588 IQGAP3Q86VI3 1631 aa23.84■■□□□ 1.41
SERF1B-208ENST00000515588 CERKQ8TCT0 537 aa23.84■■□□□ 1.41
SERF1B-208ENST00000515588 UBR1Q8IWV7 1749 aa23.84■■□□□ 1.41
SERF1B-208ENST00000515588 PIK3C2BO00750 1634 aa23.81■■□□□ 1.4
SERF1B-208ENST00000515588 GCC2Q8IWJ2 1684 aa23.81■■□□□ 1.4
SERF1B-208ENST00000515588 HFM1A2PYH4 1435 aa23.81■■□□□ 1.4
SERF1B-208ENST00000515588 POLR1AO95602 1720 aaPredicted RBP23.81■■□□□ 1.4
SERF1B-208ENST00000515588 LTBP4Q8N2S1 1624 aa23.8■■□□□ 1.4
SERF1B-208ENST00000515588 E9PCH4 1651 aa23.79■■□□□ 1.4
SERF1B-208ENST00000515588 ZNF335Q9H4Z2 1342 aaPredicted RBP23.79■■□□□ 1.4
SERF1B-208ENST00000515588 SLC52A1Q9NWF4 448 aa23.78■■□□□ 1.4
SERF1B-208ENST00000515588 MED14O60244 1454 aa23.78■■□□□ 1.4
SERF1B-208ENST00000515588 ARHGAP23Q9P227 1491 aa23.77■■□□□ 1.4
SERF1B-208ENST00000515588 FBXO41Q8TF61 875 aa23.77■■□□□ 1.4
SERF1B-208ENST00000515588 NPHP4O75161 1426 aaPredicted RBP23.76■■□□□ 1.39
SERF1B-208ENST00000515588 SLIT1O75093 1534 aa23.76■■□□□ 1.39
SERF1B-208ENST00000515588 LTKP29376 864 aa23.76■■□□□ 1.39
SERF1B-208ENST00000515588 STAG3Q9UJ98 1225 aa23.75■■□□□ 1.39
SERF1B-208ENST00000515588 TMEM2Q9UHN6 1383 aa23.74■■□□□ 1.39
SERF1B-208ENST00000515588 TXNDC2Q86VQ3 553 aa23.73■■□□□ 1.39
SERF1B-208ENST00000515588 SCAF11Q99590 1463 aaKnown RBP23.72■■□□□ 1.39
SERF1B-208ENST00000515588 KDM5AP29375 1690 aaKnown RBP23.72■■□□□ 1.39
SERF1B-208ENST00000515588 ADGRB3O60242 1522 aa23.71■■□□□ 1.39
SERF1B-208ENST00000515588 IQGAP1P46940 1657 aa23.69■■□□□ 1.38
SERF1B-208ENST00000515588 TRIM52Q96A61 297 aa23.67■■□□□ 1.38
SERF1B-208ENST00000515588 EID1Q9Y6B2 187 aa23.67■■□□□ 1.38
SERF1B-208ENST00000515588 TMEM131LA2VDJ0 1609 aa23.65■■□□□ 1.38
SERF1B-208ENST00000515588 MYO5BQ9ULV0 1848 aa23.62■■□□□ 1.37
SERF1B-208ENST00000515588 CHGAP10645 457 aaKnown RBP23.62■■□□□ 1.37
SERF1B-208ENST00000515588 ZFYVE9O95405 1425 aa23.61■■□□□ 1.37
SERF1B-208ENST00000515588 SPHKAPQ2M3C7 1700 aa23.6■■□□□ 1.37
SERF1B-208ENST00000515588 SLC4A1APQ9BWU0 796 aaKnown RBP23.6■■□□□ 1.37
SERF1B-208ENST00000515588 IQSEC2Q5JU85 1478 aa23.6■■□□□ 1.37
SERF1B-208ENST00000515588 RIMS2Q9UQ26 1411 aa23.59■■□□□ 1.37
SERF1B-208ENST00000515588 SETD5Q9C0A6 1442 aa23.57■■□□□ 1.36
SERF1B-208ENST00000515588 CPS1P31327 1500 aa23.56■■□□□ 1.36
SERF1B-208ENST00000515588 STRCP1A6NGW2 1772 aa23.55■■□□□ 1.36
SERF1B-208ENST00000515588 TRPM2O94759 1503 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms