RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 SLC34A2O95436 690 aa9.89□□□□□ -0.83
RFC1-216ENST00000514572 POTEGQ6S5H5 508 aa9.89□□□□□ -0.83
RFC1-216ENST00000514572 TMUB1Q9BVT8 246 aa9.89□□□□□ -0.83
RFC1-216ENST00000514572 NPDC1Q9NQX5 325 aaPredicted RBP9.89□□□□□ -0.83
RFC1-216ENST00000514572 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.88□□□□□ -0.83
RFC1-216ENST00000514572 MS4A1P11836 297 aa9.87□□□□□ -0.83
RFC1-216ENST00000514572 GIGYF2Q6Y7W6 1299 aaKnown RBP9.87□□□□□ -0.83
RFC1-216ENST00000514572 REPIN1Q9BWE0 567 aaKnown RBP9.87□□□□□ -0.83
RFC1-216ENST00000514572 EN1Q05925 392 aaPredicted RBP9.86□□□□□ -0.83
RFC1-216ENST00000514572 TTLL12Q14166 644 aaPredicted RBP9.86□□□□□ -0.83
RFC1-216ENST00000514572 C1orf115Q9H7X2 142 aa9.85□□□□□ -0.83
RFC1-216ENST00000514572 CDHR5Q9HBB8 845 aa9.85□□□□□ -0.83
RFC1-216ENST00000514572 FLIIQ13045 1269 aa9.84□□□□□ -0.83
RFC1-216ENST00000514572 PHF14O94880 888 aa9.83□□□□□ -0.84
RFC1-216ENST00000514572 C3orf67Q6ZVT6 689 aa9.83□□□□□ -0.84
RFC1-216ENST00000514572 EPAS1Q99814 870 aa9.83□□□□□ -0.84
RFC1-216ENST00000514572 UBTFP17480 764 aaKnown RBP9.81□□□□□ -0.84
RFC1-216ENST00000514572 PHOX2BQ99453 314 aa9.81□□□□□ -0.84
RFC1-216ENST00000514572 KDM4FA0A1W2PPD8 638 aa9.8□□□□□ -0.84
RFC1-216ENST00000514572 SH3D19Q5HYK7 790 aa9.8□□□□□ -0.84
RFC1-216ENST00000514572 CLCN1P35523 988 aa9.79□□□□□ -0.84
RFC1-216ENST00000514572 PCDHGA10Q9Y5H3 936 aa9.79□□□□□ -0.84
RFC1-216ENST00000514572 ST18O60284 1047 aa9.78□□□□□ -0.84
RFC1-216ENST00000514572 GPCPD1Q9NPB8 672 aa9.77□□□□□ -0.85
RFC1-216ENST00000514572 A6NJR5 290 aa9.76□□□□□ -0.85
RFC1-216ENST00000514572 MAP3K7O43318 606 aa9.76□□□□□ -0.85
RFC1-216ENST00000514572 TSR1Q2NL82 804 aaKnown RBP9.76□□□□□ -0.85
RFC1-216ENST00000514572 PCMTD1Q96MG8 357 aaPredicted RBP9.76□□□□□ -0.85
RFC1-216ENST00000514572 SNPHO15079 494 aa9.75□□□□□ -0.85
RFC1-216ENST00000514572 MDM2Q00987 491 aaPredicted RBP9.74□□□□□ -0.85
RFC1-216ENST00000514572 MCM6Q14566 821 aa9.74□□□□□ -0.85
RFC1-216ENST00000514572 TYW1BQ6NUM6 668 aa9.74□□□□□ -0.85
RFC1-216ENST00000514572 JPH4Q96JJ6 628 aa9.74□□□□□ -0.85
RFC1-216ENST00000514572 PCDHGA4Q9Y5G9 962 aa9.73□□□□□ -0.85
RFC1-216ENST00000514572 SKIV2LQ15477 1246 aaKnown RBP9.72□□□□□ -0.85
RFC1-216ENST00000514572 METTL3Q86U44 580 aaKnown RBP9.72□□□□□ -0.85
RFC1-216ENST00000514572 TTC13Q8NBP0 860 aa9.72□□□□□ -0.85
RFC1-216ENST00000514572 FBXW7Q969H0 707 aa9.72□□□□□ -0.85
RFC1-216ENST00000514572 FAM217BQ9NTX9 383 aaPredicted RBP9.72□□□□□ -0.85
RFC1-216ENST00000514572 SSTR3P32745 418 aaPredicted RBP9.71□□□□□ -0.86
RFC1-216ENST00000514572 RBM33Q96EV2 1170 aaKnown RBP9.71□□□□□ -0.86
RFC1-216ENST00000514572 PLSCR2Q9NRY7 297 aa9.71□□□□□ -0.86
RFC1-216ENST00000514572 PCDH10Q9P2E7 1040 aa9.71□□□□□ -0.86
RFC1-216ENST00000514572 ARID3CA6NKF2 412 aa9.69□□□□□ -0.86
RFC1-216ENST00000514572 FOSBP53539 338 aa9.69□□□□□ -0.86
RFC1-216ENST00000514572 PXYLP1Q8TE99 480 aa9.69□□□□□ -0.86
RFC1-216ENST00000514572 RBM27Q9P2N5 1060 aaKnown RBP9.69□□□□□ -0.86
RFC1-216ENST00000514572 ADGRG1Q9Y653 693 aa9.69□□□□□ -0.86
RFC1-216ENST00000514572 APBB1O00213 710 aa9.68□□□□□ -0.86
RFC1-216ENST00000514572 TRAK2O60296 914 aa9.68□□□□□ -0.86
RFC1-216ENST00000514572 CERKQ8TCT0 537 aa9.68□□□□□ -0.86
RFC1-216ENST00000514572 CLUAP1Q96AJ1 413 aa9.68□□□□□ -0.86
RFC1-216ENST00000514572 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.68□□□□□ -0.86
RFC1-216ENST00000514572 OATP04181 439 aa9.67□□□□□ -0.86
RFC1-216ENST00000514572 BEGAINQ9BUH8 593 aa9.67□□□□□ -0.86
RFC1-216ENST00000514572 FAM161AQ3B820 660 aa9.66□□□□□ -0.86
RFC1-216ENST00000514572 PADI6Q6TGC4 694 aa9.66□□□□□ -0.86
RFC1-216ENST00000514572 C6orf132Q5T0Z8 1188 aa9.65□□□□□ -0.86
RFC1-216ENST00000514572 MYSM1Q5VVJ2 828 aa9.65□□□□□ -0.86
RFC1-216ENST00000514572 MARVELD3Q96A59 401 aa9.65□□□□□ -0.86
RFC1-216ENST00000514572 PROCA1Q8NCQ7 364 aaPredicted RBP9.64□□□□□ -0.87
RFC1-216ENST00000514572 NLRP7Q8WX94 980 aa9.64□□□□□ -0.87
RFC1-216ENST00000514572 CDAN1Q8IWY9 1227 aa9.63□□□□□ -0.87
RFC1-216ENST00000514572 FNBP4Q8N3X1 1017 aaPredicted RBP9.63□□□□□ -0.87
RFC1-216ENST00000514572 ARID3AQ99856 593 aa9.63□□□□□ -0.87
RFC1-216ENST00000514572 HOXB3P14651 431 aaPredicted RBP9.62□□□□□ -0.87
RFC1-216ENST00000514572 ZDHHC16Q969W1 377 aa9.62□□□□□ -0.87
RFC1-216ENST00000514572 CCDC82Q8N4S0 544 aa9.6□□□□□ -0.87
RFC1-216ENST00000514572 ADAM33Q9BZ11 813 aa9.6□□□□□ -0.87
RFC1-216ENST00000514572 PROSER2Q86WR7 435 aaPredicted RBP9.59□□□□□ -0.87
RFC1-216ENST00000514572 PODXL2Q9NZ53 605 aa9.59□□□□□ -0.87
RFC1-216ENST00000514572 SPDYE5A6NIY4 337 aa9.58□□□□□ -0.88
RFC1-216ENST00000514572 CLK2P49760 499 aaKnown RBP9.58□□□□□ -0.88
RFC1-216ENST00000514572 EMP3P54852 163 aa9.58□□□□□ -0.88
RFC1-216ENST00000514572 PRSS12P56730 875 aa9.58□□□□□ -0.88
RFC1-216ENST00000514572 POM121Q96HA1 1249 aa9.58□□□□□ -0.88
RFC1-216ENST00000514572 POLR3EQ9NVU0 708 aa9.58□□□□□ -0.88
RFC1-216ENST00000514572 TRIM26Q12899 539 aaPredicted RBP9.57□□□□□ -0.88
RFC1-216ENST00000514572 FBXO31Q5XUX0 539 aaPredicted RBP9.57□□□□□ -0.88
RFC1-216ENST00000514572 ZNF454Q8N9F8 522 aa9.57□□□□□ -0.88
RFC1-216ENST00000514572 TBC1D2Q9BYX2 928 aa9.57□□□□□ -0.88
RFC1-216ENST00000514572 DOK7Q18PE1 504 aa9.56□□□□□ -0.88
RFC1-216ENST00000514572 PPP2R2DQ66LE6 453 aa9.56□□□□□ -0.88
RFC1-216ENST00000514572 ZNF710Q8N1W2 664 aa9.56□□□□□ -0.88
RFC1-216ENST00000514572 BANK1Q8NDB2 785 aa9.56□□□□□ -0.88
RFC1-216ENST00000514572 CDCA7LQ96GN5 454 aa9.56□□□□□ -0.88
RFC1-216ENST00000514572 FAM198AQ9UFP1 575 aa9.56□□□□□ -0.88
RFC1-216ENST00000514572 HRCP23327 699 aa9.55□□□□□ -0.88
RFC1-216ENST00000514572 DIXDC1Q155Q3 683 aa9.55□□□□□ -0.88
RFC1-216ENST00000514572 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.54□□□□□ -0.88
RFC1-216ENST00000514572 RFC5P40937 340 aa9.54□□□□□ -0.88
RFC1-216ENST00000514572 TUSC1Q2TAM9 212 aa9.54□□□□□ -0.88
RFC1-216ENST00000514572 RBM46Q8TBY0 533 aaKnown RBP9.54□□□□□ -0.88
RFC1-216ENST00000514572 EYA1Q99502 592 aa9.54□□□□□ -0.88
RFC1-216ENST00000514572 LIMD1Q9UGP4 676 aa9.54□□□□□ -0.88
RFC1-216ENST00000514572 COG6Q9Y2V7 657 aa9.54□□□□□ -0.88
RFC1-216ENST00000514572 NUDT7P0C024 238 aa9.53□□□□□ -0.88
RFC1-216ENST00000514572 GPR153Q6NV75 609 aa9.53□□□□□ -0.88
RFC1-216ENST00000514572 KHSRPQ92945 711 aaKnown RBP eCLIP9.53□□□□□ -0.88
RFC1-216ENST00000514572 ZSWIM6Q9HCJ5 1215 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms