RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 DHX29Q7Z478 1369 aaKnown RBP28.97■■■□□ 2.23
SSBP2-218ENST00000514493 IQGAP3Q86VI3 1631 aa28.96■■■□□ 2.23
SSBP2-218ENST00000514493 MPHOSPH9Q99550 1183 aa28.92■■■□□ 2.22
SSBP2-218ENST00000514493 RNF17Q9BXT8 1623 aaKnown RBP28.92■■■□□ 2.22
SSBP2-218ENST00000514493 FAM135AQ9P2D6 1515 aa28.92■■■□□ 2.22
SSBP2-218ENST00000514493 YEATS2Q9ULM3 1422 aa28.92■■■□□ 2.22
SSBP2-218ENST00000514493 NUP155O75694 1391 aa28.91■■■□□ 2.22
SSBP2-218ENST00000514493 PRDM15P57071 1507 aaPredicted RBP28.89■■■□□ 2.22
SSBP2-218ENST00000514493 ARHGEF40Q8TER5 1519 aa28.89■■■□□ 2.22
SSBP2-218ENST00000514493 MROH1Q8NDA8 1641 aa28.89■■■□□ 2.22
SSBP2-218ENST00000514493 REREQ9P2R6 1566 aa28.87■■■□□ 2.21
SSBP2-218ENST00000514493 SLC4A1APQ9BWU0 796 aaKnown RBP28.86■■■□□ 2.21
SSBP2-218ENST00000514493 VWDEQ8N2E2 1590 aa28.85■■■□□ 2.21
SSBP2-218ENST00000514493 ATP10AO60312 1499 aa28.81■■■□□ 2.2
SSBP2-218ENST00000514493 KIF3BO15066 747 aa28.79■■■□□ 2.2
SSBP2-218ENST00000514493 TET3O43151 1660 aa28.78■■■□□ 2.2
SSBP2-218ENST00000514493 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.77■■■□□ 2.2
SSBP2-218ENST00000514493 CEP152O94986 1710 aa28.75■■■□□ 2.19
SSBP2-218ENST00000514493 AGLP35573 1532 aa28.74■■■□□ 2.19
SSBP2-218ENST00000514493 KANK1Q14678 1352 aa28.74■■■□□ 2.19
SSBP2-218ENST00000514493 ANKRD30BQ9BXX2 1392 aa28.74■■■□□ 2.19
SSBP2-218ENST00000514493 PKD2Q13563 968 aa28.74■■■□□ 2.19
SSBP2-218ENST00000514493 SIGLEC1Q9BZZ2 1709 aa28.73■■■□□ 2.19
SSBP2-218ENST00000514493 FOXD1Q16676 465 aa28.73■■■□□ 2.19
SSBP2-218ENST00000514493 E9PCH4 1651 aa28.72■■■□□ 2.19
SSBP2-218ENST00000514493 LMTK2Q8IWU2 1503 aa28.71■■■□□ 2.19
SSBP2-218ENST00000514493 SIN3AQ96ST3 1273 aa28.7■■■□□ 2.18
SSBP2-218ENST00000514493 ZC3H13Q5T200 1668 aaKnown RBP28.69■■■□□ 2.18
SSBP2-218ENST00000514493 EFCAB6Q5THR3 1501 aa28.67■■■□□ 2.18
SSBP2-218ENST00000514493 ABCC3O15438 1527 aa28.65■■■□□ 2.18
SSBP2-218ENST00000514493 RPRD2Q5VT52 1461 aaKnown RBP28.64■■■□□ 2.17
SSBP2-218ENST00000514493 SPHKAPQ2M3C7 1700 aa28.63■■■□□ 2.17
SSBP2-218ENST00000514493 NEUROD1Q13562 356 aa28.62■■■□□ 2.17
SSBP2-218ENST00000514493 CAMSAP1Q5T5Y3 1602 aa28.62■■■□□ 2.17
SSBP2-218ENST00000514493 GGT6Q6P531 493 aa28.6■■■□□ 2.17
SSBP2-218ENST00000514493 TIMELESSQ9UNS1 1208 aa28.58■■■□□ 2.17
SSBP2-218ENST00000514493 PLA2R1Q13018 1463 aa28.56■■■□□ 2.16
SSBP2-218ENST00000514493 TRPM2O94759 1503 aa28.56■■■□□ 2.16
SSBP2-218ENST00000514493 TONSLQ96HA7 1378 aa28.55■■■□□ 2.16
SSBP2-218ENST00000514493 PTPRTO14522 1441 aa28.52■■■□□ 2.16
SSBP2-218ENST00000514493 WASHC2CQ9Y4E1 1318 aa28.51■■■□□ 2.15
SSBP2-218ENST00000514493 CCDC144AA2RUR9 1427 aa28.5■■■□□ 2.15
SSBP2-218ENST00000514493 ARID4BQ4LE39 1312 aaPredicted RBP28.5■■■□□ 2.15
SSBP2-218ENST00000514493 NPATQ14207 1427 aa28.49■■■□□ 2.15
SSBP2-218ENST00000514493 CLTCQ00610 1675 aaKnown RBP28.49■■■□□ 2.15
SSBP2-218ENST00000514493 CFAP65Q6ZU64 1925 aaKnown RBP28.48■■■□□ 2.15
SSBP2-218ENST00000514493 ARHGAP31Q2M1Z3 1444 aa28.47■■■□□ 2.15
SSBP2-218ENST00000514493 PPP6R1Q9UPN7 881 aa28.46■■■□□ 2.15
SSBP2-218ENST00000514493 CLTCL1P53675 1640 aa28.46■■■□□ 2.15
SSBP2-218ENST00000514493 MLECQ14165 292 aa28.44■■■□□ 2.14
SSBP2-218ENST00000514493 KDM4FA0A1W2PPD8 638 aa28.42■■■□□ 2.14
SSBP2-218ENST00000514493 PREX1Q8TCU6 1659 aa28.41■■■□□ 2.14
SSBP2-218ENST00000514493 CNTLNQ9NXG0 1405 aa28.39■■■□□ 2.13
SSBP2-218ENST00000514493 KIF1BO60333 1816 aa28.37■■■□□ 2.13
SSBP2-218ENST00000514493 MROH2AA6NES4 1674 aa28.37■■■□□ 2.13
SSBP2-218ENST00000514493 NOS1P29475 1434 aa28.36■■■□□ 2.13
SSBP2-218ENST00000514493 SYNMO15061 1565 aa28.36■■■□□ 2.13
SSBP2-218ENST00000514493 PPP1R15AO75807 674 aaPredicted RBP28.36■■■□□ 2.13
SSBP2-218ENST00000514493 NEURL4Q96JN8 1562 aa28.35■■■□□ 2.13
SSBP2-218ENST00000514493 UGGT1Q9NYU2 1555 aa28.35■■■□□ 2.13
SSBP2-218ENST00000514493 L3MBTL2Q969R5 705 aa28.35■■■□□ 2.13
SSBP2-218ENST00000514493 PIK3C2BO00750 1634 aa28.34■■■□□ 2.13
SSBP2-218ENST00000514493 FER1L4A9Z1Z3 1794 aa28.34■■■□□ 2.13
SSBP2-218ENST00000514493 SPATA31E1Q6ZUB1 1445 aa28.31■■■□□ 2.12
SSBP2-218ENST00000514493 ERVK-7P63135 1459 aa28.3■■■□□ 2.12
SSBP2-218ENST00000514493 SPATA31D1Q6ZQQ2 1576 aa28.28■■■□□ 2.12
SSBP2-218ENST00000514493 ADGRB3O60242 1522 aa28.26■■■□□ 2.11
SSBP2-218ENST00000514493 ADAMTSL3P82987 1691 aa28.25■■■□□ 2.11
SSBP2-218ENST00000514493 ESF1Q9H501 851 aaKnown RBP28.24■■■□□ 2.11
SSBP2-218ENST00000514493 IFT172Q9UG01 1749 aa28.22■■■□□ 2.11
SSBP2-218ENST00000514493 MADDQ8WXG6 1647 aa28.21■■■□□ 2.11
SSBP2-218ENST00000514493 ZMYM3Q14202 1370 aa28.21■■■□□ 2.11
SSBP2-218ENST00000514493 UHRF1BP1Q6BDS2 1440 aa28.21■■■□□ 2.11
SSBP2-218ENST00000514493 C3P01024 1663 aa28.2■■■□□ 2.1
SSBP2-218ENST00000514493 ZNF316A6NFI3 1004 aaPredicted RBP28.18■■■□□ 2.1
SSBP2-218ENST00000514493 MYO5BQ9ULV0 1848 aa28.17■■■□□ 2.1
SSBP2-218ENST00000514493 PLPPR3Q6T4P5 718 aa28.16■■■□□ 2.1
SSBP2-218ENST00000514493 RGL3Q3MIN7 710 aa28.16■■■□□ 2.1
SSBP2-218ENST00000514493 FBXO31Q5XUX0 539 aaPredicted RBP28.15■■■□□ 2.1
SSBP2-218ENST00000514493 PPLO60437 1756 aa28.14■■■□□ 2.1
SSBP2-218ENST00000514493 RIMS1Q86UR5 1692 aaKnown RBP28.14■■■□□ 2.09
SSBP2-218ENST00000514493 DCAF11Q8TEB1 546 aa28.14■■■□□ 2.09
SSBP2-218ENST00000514493 SLC52A1Q9NWF4 448 aa28.14■■■□□ 2.09
SSBP2-218ENST00000514493 TMEM131LA2VDJ0 1609 aa28.13■■■□□ 2.09
SSBP2-218ENST00000514493 CEBPAP49715 358 aaPredicted RBP28.13■■■□□ 2.09
SSBP2-218ENST00000514493 NBPF8Q3BBV2 869 aa28.13■■■□□ 2.09
SSBP2-218ENST00000514493 PRAG1Q86YV5 1406 aa28.12■■■□□ 2.09
SSBP2-218ENST00000514493 RALGAPBQ86X10 1494 aa28.11■■■□□ 2.09
SSBP2-218ENST00000514493 TRPM1Q7Z4N2 1603 aa28.11■■■□□ 2.09
SSBP2-218ENST00000514493 PTPRMP28827 1452 aa28.1■■■□□ 2.09
SSBP2-218ENST00000514493 MYOM2P54296 1465 aa28.1■■■□□ 2.09
SSBP2-218ENST00000514493 IDI1Q13907 227 aa28.07■■■□□ 2.08
SSBP2-218ENST00000514493 KDM2AQ9Y2K7 1162 aa28.07■■■□□ 2.08
SSBP2-218ENST00000514493 KDM5AP29375 1690 aaKnown RBP28.05■■■□□ 2.08
SSBP2-218ENST00000514493 STAC3Q96MF2 364 aa28.05■■■□□ 2.08
SSBP2-218ENST00000514493 TNRQ92752 1358 aa28.05■■■□□ 2.08
SSBP2-218ENST00000514493 NEXMIFQ5QGS0 1516 aa28.05■■■□□ 2.08
SSBP2-218ENST00000514493 ZNF326Q5BKZ1 582 aaKnown RBP28.04■■■□□ 2.08
SSBP2-218ENST00000514493 CHGAP10645 457 aaKnown RBP28.03■■■□□ 2.08
SSBP2-218ENST00000514493 KIAA1210Q9ULL0 1709 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms