RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 CDC42BPBQ9Y5S2 1711 aa5.55□□□□□ -1.52
CHD1-211ENST00000514344 MEX3CQ5U5Q3 659 aaKnown RBP5.55□□□□□ -1.52
CHD1-211ENST00000514344 THEMISQ8N1K5 641 aaPredicted RBP5.55□□□□□ -1.52
CHD1-211ENST00000514344 CDK11AQ9UQ88 783 aaPredicted RBP5.55□□□□□ -1.52
CHD1-211ENST00000514344 IQGAP1P46940 1657 aa5.55□□□□□ -1.52
CHD1-211ENST00000514344 HOXD11P31277 338 aaPredicted RBP5.55□□□□□ -1.52
CHD1-211ENST00000514344 TNRQ92752 1358 aa5.54□□□□□ -1.52
CHD1-211ENST00000514344 SPAG9O60271 1321 aaKnown RBP5.54□□□□□ -1.52
CHD1-211ENST00000514344 SYNMO15061 1565 aa5.54□□□□□ -1.52
CHD1-211ENST00000514344 RXRBP28702 533 aa5.54□□□□□ -1.52
CHD1-211ENST00000514344 ROBO1Q9Y6N7 1651 aa5.54□□□□□ -1.52
CHD1-211ENST00000514344 UTRNP46939 3433 aa5.53□□□□□ -1.52
CHD1-211ENST00000514344 UGGT1Q9NYU2 1555 aa5.53□□□□□ -1.52
CHD1-211ENST00000514344 FAM135BQ49AJ0 1406 aa5.53□□□□□ -1.52
CHD1-211ENST00000514344 HNRNPMP52272 730 aaKnown RBP eCLIP5.53□□□□□ -1.52
CHD1-211ENST00000514344 ZNF772Q68DY9 489 aaPredicted RBP5.53□□□□□ -1.52
CHD1-211ENST00000514344 FAM135AQ9P2D6 1515 aa5.53□□□□□ -1.52
CHD1-211ENST00000514344 EHMT2Q96KQ7 1210 aa5.53□□□□□ -1.52
CHD1-211ENST00000514344 MED14O60244 1454 aa5.53□□□□□ -1.52
CHD1-211ENST00000514344 SAMD9LQ8IVG5 1584 aa5.53□□□□□ -1.52
CHD1-211ENST00000514344 NUTM2BA6NNL0 878 aaPredicted RBP5.52□□□□□ -1.53
CHD1-211ENST00000514344 NUTM2EB1AL46 878 aaPredicted RBP5.52□□□□□ -1.53
CHD1-211ENST00000514344 NUTM2DQ5VT03 806 aaPredicted RBP5.52□□□□□ -1.53
CHD1-211ENST00000514344 NUTM2AQ8IVF1 878 aaPredicted RBP5.52□□□□□ -1.53
CHD1-211ENST00000514344 ZRANB1Q9UGI0 708 aa5.52□□□□□ -1.53
CHD1-211ENST00000514344 CLIP1P30622 1438 aa5.52□□□□□ -1.53
CHD1-211ENST00000514344 TROQ12816 1431 aaPredicted RBP5.52□□□□□ -1.53
CHD1-211ENST00000514344 A2MP01023 1474 aa5.52□□□□□ -1.53
CHD1-211ENST00000514344 SETBP1Q9Y6X0 1596 aa5.52□□□□□ -1.53
CHD1-211ENST00000514344 XIRP1Q702N8 1843 aaKnown RBP5.52□□□□□ -1.53
CHD1-211ENST00000514344 LRP6O75581 1613 aa5.51□□□□□ -1.53
CHD1-211ENST00000514344 SYCP2Q9BX26 1530 aa5.51□□□□□ -1.53
CHD1-211ENST00000514344 JCADQ9P266 1359 aa5.51□□□□□ -1.53
CHD1-211ENST00000514344 DEPDC5O75140 1603 aa5.51□□□□□ -1.53
CHD1-211ENST00000514344 PREX2Q70Z35 1606 aa5.51□□□□□ -1.53
CHD1-211ENST00000514344 ATP7AQ04656 1500 aa5.51□□□□□ -1.53
CHD1-211ENST00000514344 PLXNC1O60486 1568 aa5.51□□□□□ -1.53
CHD1-211ENST00000514344 TMEM94Q12767 1356 aa5.5□□□□□ -1.53
CHD1-211ENST00000514344 CSRNP3Q8WYN3 585 aa5.5□□□□□ -1.53
CHD1-211ENST00000514344 PHLPP1O60346 1717 aa5.5□□□□□ -1.53
CHD1-211ENST00000514344 WASHC2CQ9Y4E1 1318 aa5.5□□□□□ -1.53
CHD1-211ENST00000514344 MIA2Q96PC5 1412 aa5.49□□□□□ -1.53
CHD1-211ENST00000514344 KIF3BO15066 747 aa5.49□□□□□ -1.53
CHD1-211ENST00000514344 PZPP20742 1482 aa5.49□□□□□ -1.53
CHD1-211ENST00000514344 ZC3H13Q5T200 1668 aaKnown RBP5.48□□□□□ -1.53
CHD1-211ENST00000514344 NLRP1Q9C000 1473 aa5.48□□□□□ -1.53
CHD1-211ENST00000514344 LTKP29376 864 aa5.48□□□□□ -1.53
CHD1-211ENST00000514344 CDC42BPAQ5VT25 1732 aa5.48□□□□□ -1.53
CHD1-211ENST00000514344 CEP350Q5VT06 3117 aa5.48□□□□□ -1.53
CHD1-211ENST00000514344 TXNDC2Q86VQ3 553 aa5.48□□□□□ -1.53
CHD1-211ENST00000514344 PROSER2Q86WR7 435 aaPredicted RBP5.48□□□□□ -1.53
CHD1-211ENST00000514344 SLAIN2Q9P270 581 aa5.48□□□□□ -1.53
CHD1-211ENST00000514344 RGS12O14924 1447 aa5.48□□□□□ -1.53
CHD1-211ENST00000514344 AFF2P51816 1311 aa5.47□□□□□ -1.53
CHD1-211ENST00000514344 SPATA31A6Q5VVP1 1343 aa5.47□□□□□ -1.53
CHD1-211ENST00000514344 INO80Q9ULG1 1556 aaPredicted RBP5.47□□□□□ -1.53
CHD1-211ENST00000514344 LRRIQ1Q96JM4 1722 aa5.47□□□□□ -1.53
CHD1-211ENST00000514344 FMN1Q68DA7 1419 aa5.47□□□□□ -1.53
CHD1-211ENST00000514344 SCAF11Q99590 1463 aaKnown RBP5.46□□□□□ -1.53
CHD1-211ENST00000514344 KDM5DQ9BY66 1539 aa5.46□□□□□ -1.54
CHD1-211ENST00000514344 CDK12Q9NYV4 1490 aaPredicted RBP5.46□□□□□ -1.54
CHD1-211ENST00000514344 SP7Q8TDD2 431 aaPredicted RBP5.46□□□□□ -1.54
CHD1-211ENST00000514344 SLC26A8Q96RN1 970 aa5.46□□□□□ -1.54
CHD1-211ENST00000514344 COL16A1Q07092 1604 aaPredicted RBP5.46□□□□□ -1.54
CHD1-211ENST00000514344 C8orf37Q96NL8 207 aa5.46□□□□□ -1.54
CHD1-211ENST00000514344 QTRT2Q9H974 415 aaKnown RBP5.46□□□□□ -1.54
CHD1-211ENST00000514344 MAP3K1Q13233 1512 aa5.45□□□□□ -1.54
CHD1-211ENST00000514344 CFAP65Q6ZU64 1925 aaKnown RBP5.45□□□□□ -1.54
CHD1-211ENST00000514344 MSH6P52701 1360 aa5.45□□□□□ -1.54
CHD1-211ENST00000514344 CFDP1Q9UEE9 299 aaPredicted RBP5.45□□□□□ -1.54
CHD1-211ENST00000514344 ADGBQ8N7X0 1667 aa5.45□□□□□ -1.54
CHD1-211ENST00000514344 ATAD2Q6PL18 1390 aa5.44□□□□□ -1.54
CHD1-211ENST00000514344 RBM6P78332 1123 aaKnown RBP5.44□□□□□ -1.54
CHD1-211ENST00000514344 EID1Q9Y6B2 187 aa5.44□□□□□ -1.54
CHD1-211ENST00000514344 LRRC9Q6ZRR7 1453 aa5.44□□□□□ -1.54
CHD1-211ENST00000514344 ZNF644Q9H582 1327 aaPredicted RBP5.44□□□□□ -1.54
CHD1-211ENST00000514344 DHX29Q7Z478 1369 aaKnown RBP5.43□□□□□ -1.54
CHD1-211ENST00000514344 GPATCH8Q9UKJ3 1502 aaKnown RBP5.43□□□□□ -1.54
CHD1-211ENST00000514344 UBTFP17480 764 aaKnown RBP5.43□□□□□ -1.54
CHD1-211ENST00000514344 C14orf37Q86TY3 774 aa5.43□□□□□ -1.54
CHD1-211ENST00000514344 BCANQ96GW7 911 aa5.43□□□□□ -1.54
CHD1-211ENST00000514344 FGD6Q6ZV73 1430 aa5.43□□□□□ -1.54
CHD1-211ENST00000514344 UBR1Q8IWV7 1749 aa5.43□□□□□ -1.54
CHD1-211ENST00000514344 KCNA6P17658 529 aa5.43□□□□□ -1.54
CHD1-211ENST00000514344 NCOA2Q15596 1464 aa5.42□□□□□ -1.54
CHD1-211ENST00000514344 ARHGAP35Q9NRY4 1499 aa5.42□□□□□ -1.54
CHD1-211ENST00000514344 IFFO2Q5TF58 517 aa5.42□□□□□ -1.54
CHD1-211ENST00000514344 TIAM1Q13009 1591 aa5.42□□□□□ -1.54
CHD1-211ENST00000514344 KIAA1107Q9UPP5 1409 aa5.42□□□□□ -1.54
CHD1-211ENST00000514344 PRDM15P57071 1507 aaPredicted RBP5.42□□□□□ -1.54
CHD1-211ENST00000514344 YY1P25490 414 aa5.42□□□□□ -1.54
CHD1-211ENST00000514344 NGLY1Q96IV0 654 aa5.42□□□□□ -1.54
CHD1-211ENST00000514344 STAG3Q9UJ98 1225 aa5.42□□□□□ -1.54
CHD1-211ENST00000514344 ADAMTS2O95450 1211 aa5.41□□□□□ -1.54
CHD1-211ENST00000514344 SHPRHQ149N8 1683 aa5.41□□□□□ -1.54
CHD1-211ENST00000514344 PSDA5PKW4 1024 aaPredicted RBP5.41□□□□□ -1.54
CHD1-211ENST00000514344 ERVK-7P63135 1459 aa5.41□□□□□ -1.54
CHD1-211ENST00000514344 PLEKHH2Q8IVE3 1493 aa5.41□□□□□ -1.54
CHD1-211ENST00000514344 DEFB132Q7Z7B7 95 aa5.4□□□□□ -1.54
CHD1-211ENST00000514344 GOLGB1Q14789 3259 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms