RNA–Protein interactions for RNA: ENST00000514055.5

CAST-240, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-240ENST00000514055 POTEAQ6S8J7 498 aa14.01□□□□□ -0.17
CAST-240ENST00000514055 ANKLE2Q86XL3 938 aa14.01□□□□□ -0.17
CAST-240ENST00000514055 NPHP4O75161 1426 aaPredicted RBP14□□□□□ -0.17
CAST-240ENST00000514055 CASKIN1Q8WXD9 1431 aa14□□□□□ -0.17
CAST-240ENST00000514055 LRRC7Q96NW7 1537 aa14□□□□□ -0.17
CAST-240ENST00000514055 STRCP1A6NGW2 1772 aa13.99□□□□□ -0.17
CAST-240ENST00000514055 CCDC18Q5T9S5 1454 aa13.99□□□□□ -0.17
CAST-240ENST00000514055 KIAA1107Q9UPP5 1409 aa13.98□□□□□ -0.17
CAST-240ENST00000514055 CFDP1Q9UEE9 299 aaPredicted RBP13.98□□□□□ -0.17
CAST-240ENST00000514055 ZNF644Q9H582 1327 aaPredicted RBP13.97□□□□□ -0.17
CAST-240ENST00000514055 MED14O60244 1454 aa13.96□□□□□ -0.17
CAST-240ENST00000514055 LOC105371045A0A1W2PR82 267 aa13.96□□□□□ -0.17
CAST-240ENST00000514055 PZPP20742 1482 aa13.95□□□□□ -0.18
CAST-240ENST00000514055 THEMISQ8N1K5 641 aaPredicted RBP13.95□□□□□ -0.18
CAST-240ENST00000514055 KIF3BO15066 747 aa13.94□□□□□ -0.18
CAST-240ENST00000514055 MIA2Q96PC5 1412 aa13.94□□□□□ -0.18
CAST-240ENST00000514055 ADGBQ8N7X0 1667 aa13.94□□□□□ -0.18
CAST-240ENST00000514055 DHX29Q7Z478 1369 aaKnown RBP13.94□□□□□ -0.18
CAST-240ENST00000514055 RNF17Q9BXT8 1623 aaKnown RBP13.93□□□□□ -0.18
CAST-240ENST00000514055 PLEKHH2Q8IVE3 1493 aa13.93□□□□□ -0.18
CAST-240ENST00000514055 UGGT1Q9NYU2 1555 aa13.93□□□□□ -0.18
CAST-240ENST00000514055 CEP162Q5TB80 1403 aa13.93□□□□□ -0.18
CAST-240ENST00000514055 CCNB3Q8WWL7 1395 aa13.93□□□□□ -0.18
CAST-240ENST00000514055 IQGAP1P46940 1657 aa13.92□□□□□ -0.18
CAST-240ENST00000514055 DEPDC5O75140 1603 aa13.92□□□□□ -0.18
CAST-240ENST00000514055 MBD5Q9P267 1494 aa13.92□□□□□ -0.18
CAST-240ENST00000514055 FAM135AQ9P2D6 1515 aa13.91□□□□□ -0.18
CAST-240ENST00000514055 WASHC2CQ9Y4E1 1318 aa13.9□□□□□ -0.18
CAST-240ENST00000514055 KDM5DQ9BY66 1539 aa13.9□□□□□ -0.18
CAST-240ENST00000514055 SETD1AO15047 1707 aaKnown RBP13.9□□□□□ -0.18
CAST-240ENST00000514055 NLRP1Q9C000 1473 aa13.9□□□□□ -0.18
CAST-240ENST00000514055 SYNMO15061 1565 aa13.88□□□□□ -0.19
CAST-240ENST00000514055 FYCO1Q9BQS8 1478 aa13.88□□□□□ -0.19
CAST-240ENST00000514055 RTEL1-TNFRSF6BF6WH68 1400 aa13.87□□□□□ -0.19
CAST-240ENST00000514055 XIRP1Q702N8 1843 aaKnown RBP13.85□□□□□ -0.19
CAST-240ENST00000514055 ZC3H13Q5T200 1668 aaKnown RBP13.85□□□□□ -0.19
CAST-240ENST00000514055 LTKP29376 864 aa13.84□□□□□ -0.19
CAST-240ENST00000514055 TIAM1Q13009 1591 aa13.83□□□□□ -0.19
CAST-240ENST00000514055 FAM135BQ49AJ0 1406 aa13.83□□□□□ -0.2
CAST-240ENST00000514055 RBM33Q96EV2 1170 aaKnown RBP13.82□□□□□ -0.2
CAST-240ENST00000514055 MTUS2Q5JR59 1369 aa13.82□□□□□ -0.2
CAST-240ENST00000514055 NCOA2Q15596 1464 aa13.8□□□□□ -0.2
CAST-240ENST00000514055 SCAF11Q99590 1463 aaKnown RBP13.8□□□□□ -0.2
CAST-240ENST00000514055 ERVK-7P63135 1459 aa13.8□□□□□ -0.2
CAST-240ENST00000514055 TXNDC2Q86VQ3 553 aa13.79□□□□□ -0.2
CAST-240ENST00000514055 UPF1Q92900 1129 aaKnown RBP eCLIP13.79□□□□□ -0.2
CAST-240ENST00000514055 TMEM94Q12767 1356 aa13.79□□□□□ -0.2
CAST-240ENST00000514055 CCDC141Q6ZP82 1450 aa13.79□□□□□ -0.2
CAST-240ENST00000514055 ABCC3O15438 1527 aa13.79□□□□□ -0.2
CAST-240ENST00000514055 ROBO1Q9Y6N7 1651 aa13.78□□□□□ -0.2
CAST-240ENST00000514055 UBR1Q8IWV7 1749 aa13.77□□□□□ -0.21
CAST-240ENST00000514055 ARHGAP23Q9P227 1491 aa13.76□□□□□ -0.21
CAST-240ENST00000514055 VPS8Q8N3P4 1428 aa13.76□□□□□ -0.21
CAST-240ENST00000514055 CFAP65Q6ZU64 1925 aaKnown RBP13.76□□□□□ -0.21
CAST-240ENST00000514055 CAMSAP2Q08AD1 1489 aa13.75□□□□□ -0.21
CAST-240ENST00000514055 TRIM52Q96A61 297 aa13.75□□□□□ -0.21
CAST-240ENST00000514055 SRCAPQ6ZRS2 3230 aa13.75□□□□□ -0.21
CAST-240ENST00000514055 MAP3K1Q13233 1512 aa13.74□□□□□ -0.21
CAST-240ENST00000514055 SLIT1O75093 1534 aa13.73□□□□□ -0.21
CAST-240ENST00000514055 PROSER2Q86WR7 435 aaPredicted RBP13.72□□□□□ -0.21
CAST-240ENST00000514055 LRP6O75581 1613 aa13.72□□□□□ -0.21
CAST-240ENST00000514055 EHBP1L1Q8N3D4 1523 aa13.71□□□□□ -0.21
CAST-240ENST00000514055 KCNA6P17658 529 aa13.71□□□□□ -0.21
CAST-240ENST00000514055 SLC26A8Q96RN1 970 aa13.71□□□□□ -0.21
CAST-240ENST00000514055 MROH1Q8NDA8 1641 aa13.71□□□□□ -0.22
CAST-240ENST00000514055 JCADQ9P266 1359 aa13.71□□□□□ -0.22
CAST-240ENST00000514055 EID1Q9Y6B2 187 aa13.7□□□□□ -0.22
CAST-240ENST00000514055 CEP152O94986 1710 aa13.7□□□□□ -0.22
CAST-240ENST00000514055 TSPY4P0CV99 314 aa13.69□□□□□ -0.22
CAST-240ENST00000514055 TSPY10P0CW01 314 aa13.69□□□□□ -0.22
CAST-240ENST00000514055 RSPH4AQ5TD94 716 aa13.69□□□□□ -0.22
CAST-240ENST00000514055 PHLPP1O60346 1717 aa13.68□□□□□ -0.22
CAST-240ENST00000514055 TMEM2Q9UHN6 1383 aa13.68□□□□□ -0.22
CAST-240ENST00000514055 SLAIN2Q9P270 581 aa13.67□□□□□ -0.22
CAST-240ENST00000514055 ARHGEF5Q12774 1597 aa13.66□□□□□ -0.22
CAST-240ENST00000514055 PRDM15P57071 1507 aaPredicted RBP13.66□□□□□ -0.22
CAST-240ENST00000514055 MEX3CQ5U5Q3 659 aaKnown RBP13.66□□□□□ -0.22
CAST-240ENST00000514055 LRRC9Q6ZRR7 1453 aa13.66□□□□□ -0.22
CAST-240ENST00000514055 PIK3C2BO00750 1634 aa13.65□□□□□ -0.22
CAST-240ENST00000514055 ZNF772Q68DY9 489 aaPredicted RBP13.65□□□□□ -0.22
CAST-240ENST00000514055 COL16A1Q07092 1604 aaPredicted RBP13.64□□□□□ -0.23
CAST-240ENST00000514055 STAG3Q9UJ98 1225 aa13.64□□□□□ -0.23
CAST-240ENST00000514055 TET3O43151 1660 aa13.63□□□□□ -0.23
CAST-240ENST00000514055 MSH6P52701 1360 aa13.63□□□□□ -0.23
CAST-240ENST00000514055 EIF2AK4Q9P2K8 1649 aaKnown RBP13.62□□□□□ -0.23
CAST-240ENST00000514055 RXRBP28702 533 aa13.62□□□□□ -0.23
CAST-240ENST00000514055 IDI1Q13907 227 aa13.62□□□□□ -0.23
CAST-240ENST00000514055 ARHGAP31Q2M1Z3 1444 aa13.62□□□□□ -0.23
CAST-240ENST00000514055 NWD1Q149M9 1564 aa13.61□□□□□ -0.23
CAST-240ENST00000514055 SPATA31A6Q5VVP1 1343 aa13.61□□□□□ -0.23
CAST-240ENST00000514055 NKTRP30414 1462 aaKnown RBP13.61□□□□□ -0.23
CAST-240ENST00000514055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.6□□□□□ -0.234e-8■□□□□ 8.4
CAST-240ENST00000514055 MAST1Q9Y2H9 1570 aa13.6□□□□□ -0.23
CAST-240ENST00000514055 EFCAB6Q5THR3 1501 aa13.59□□□□□ -0.23
CAST-240ENST00000514055 NUTM2BA6NNL0 878 aaPredicted RBP13.59□□□□□ -0.23
CAST-240ENST00000514055 NUTM2EB1AL46 878 aaPredicted RBP13.59□□□□□ -0.23
CAST-240ENST00000514055 NUTM2AQ8IVF1 878 aaPredicted RBP13.59□□□□□ -0.23
CAST-240ENST00000514055 BCANQ96GW7 911 aa13.59□□□□□ -0.23
CAST-240ENST00000514055 FGD6Q6ZV73 1430 aa13.58□□□□□ -0.24
CAST-240ENST00000514055 APLP2Q06481 763 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms