RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 TRIM26Q12899 539 aaPredicted RBP17.09■□□□□ 0.33
HTT-213ENST00000513806 ERBINQ96RT1 1412 aa17.09■□□□□ 0.33
HTT-213ENST00000513806 RNF17Q9BXT8 1623 aaKnown RBP17.09■□□□□ 0.33
HTT-213ENST00000513806 CLTCQ00610 1675 aaKnown RBP17.08■□□□□ 0.32
HTT-213ENST00000513806 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.07■□□□□ 0.32
HTT-213ENST00000513806 HFM1A2PYH4 1435 aa17.06■□□□□ 0.32
HTT-213ENST00000513806 KDM4FA0A1W2PPD8 638 aa17.06■□□□□ 0.32
HTT-213ENST00000513806 DEPDC5O75140 1603 aa17.06■□□□□ 0.32
HTT-213ENST00000513806 CFAP65Q6ZU64 1925 aaKnown RBP17.06■□□□□ 0.32
HTT-213ENST00000513806 PLPPR3Q6T4P5 718 aa17.05■□□□□ 0.32
HTT-213ENST00000513806 UNC13BO14795 1591 aa17.03■□□□□ 0.32
HTT-213ENST00000513806 PRDM15P57071 1507 aaPredicted RBP17.01■□□□□ 0.31
HTT-213ENST00000513806 SETD5Q9C0A6 1442 aa17.01■□□□□ 0.31
HTT-213ENST00000513806 C3P01024 1663 aa17■□□□□ 0.31
HTT-213ENST00000513806 PCGF6Q9BYE7 350 aa16.99■□□□□ 0.31
HTT-213ENST00000513806 ABCC3O15438 1527 aa16.99■□□□□ 0.31
HTT-213ENST00000513806 RAB3GAP2Q9H2M9 1393 aa16.99■□□□□ 0.31
HTT-213ENST00000513806 CAMSAP1Q5T5Y3 1602 aa16.98■□□□□ 0.31
HTT-213ENST00000513806 KDM5DQ9BY66 1539 aa16.97■□□□□ 0.31
HTT-213ENST00000513806 CEBPAP49715 358 aaPredicted RBP16.97■□□□□ 0.31
HTT-213ENST00000513806 VWDEQ8N2E2 1590 aa16.97■□□□□ 0.31
HTT-213ENST00000513806 IQGAP3Q86VI3 1631 aa16.96■□□□□ 0.31
HTT-213ENST00000513806 TRIM52Q96A61 297 aa16.96■□□□□ 0.31
HTT-213ENST00000513806 MROH2AA6NES4 1674 aa16.96■□□□□ 0.31
HTT-213ENST00000513806 ZC3H13Q5T200 1668 aaKnown RBP16.96■□□□□ 0.31
HTT-213ENST00000513806 WASHC2CQ9Y4E1 1318 aa16.96■□□□□ 0.3
HTT-213ENST00000513806 NUP155O75694 1391 aa16.95■□□□□ 0.3
HTT-213ENST00000513806 ESF1Q9H501 851 aaKnown RBP16.95■□□□□ 0.3
HTT-213ENST00000513806 PTPRMP28827 1452 aa16.94■□□□□ 0.3
HTT-213ENST00000513806 FAM135AQ9P2D6 1515 aa16.93■□□□□ 0.3
HTT-213ENST00000513806 KANK1Q14678 1352 aa16.92■□□□□ 0.3
HTT-213ENST00000513806 E9PCH4 1651 aa16.92■□□□□ 0.3
HTT-213ENST00000513806 TET3O43151 1660 aa16.92■□□□□ 0.3
HTT-213ENST00000513806 PZPP20742 1482 aa16.92■□□□□ 0.3
HTT-213ENST00000513806 ZMYM3Q14202 1370 aa16.9■□□□□ 0.3
HTT-213ENST00000513806 CNTLNQ9NXG0 1405 aa16.89■□□□□ 0.29
HTT-213ENST00000513806 FBXO31Q5XUX0 539 aaPredicted RBP16.89■□□□□ 0.29
HTT-213ENST00000513806 EFCAB6Q5THR3 1501 aa16.89■□□□□ 0.29
HTT-213ENST00000513806 LMTK2Q8IWU2 1503 aa16.89■□□□□ 0.29
HTT-213ENST00000513806 PREX1Q8TCU6 1659 aa16.88■□□□□ 0.29
HTT-213ENST00000513806 FOXD1Q16676 465 aa16.87■□□□□ 0.29
HTT-213ENST00000513806 PPP6R1Q9UPN7 881 aa16.87■□□□□ 0.29
HTT-213ENST00000513806 NPATQ14207 1427 aa16.87■□□□□ 0.29
HTT-213ENST00000513806 SLC4A1APQ9BWU0 796 aaKnown RBP16.84■□□□□ 0.29
HTT-213ENST00000513806 SPHKAPQ2M3C7 1700 aa16.82■□□□□ 0.28
HTT-213ENST00000513806 ERVK-7P63135 1459 aa16.82■□□□□ 0.28
HTT-213ENST00000513806 PKD2Q13563 968 aa16.82■□□□□ 0.28
HTT-213ENST00000513806 MPHOSPH9Q99550 1183 aa16.82■□□□□ 0.28
HTT-213ENST00000513806 SYNMO15061 1565 aa16.81■□□□□ 0.28
HTT-213ENST00000513806 SPATA31D1Q6ZQQ2 1576 aa16.81■□□□□ 0.28
HTT-213ENST00000513806 UGGT1Q9NYU2 1555 aa16.81■□□□□ 0.28
HTT-213ENST00000513806 ARHGAP31Q2M1Z3 1444 aa16.8■□□□□ 0.28
HTT-213ENST00000513806 MYO3AQ8NEV4 1616 aa16.8■□□□□ 0.28
HTT-213ENST00000513806 SETD1BQ9UPS6 1966 aaKnown RBP16.8■□□□□ 0.28
HTT-213ENST00000513806 MYO5BQ9ULV0 1848 aa16.79■□□□□ 0.28
HTT-213ENST00000513806 TNRQ92752 1358 aa16.77■□□□□ 0.28
HTT-213ENST00000513806 HRCP23327 699 aa16.77■□□□□ 0.28
HTT-213ENST00000513806 AEBP2Q6ZN18 517 aaPredicted RBP16.76■□□□□ 0.27
HTT-213ENST00000513806 NOS1P29475 1434 aa16.76■□□□□ 0.27
HTT-213ENST00000513806 RPRD2Q5VT52 1461 aaKnown RBP16.75■□□□□ 0.27
HTT-213ENST00000513806 PIK3C2BO00750 1634 aa16.75■□□□□ 0.27
HTT-213ENST00000513806 CLTCL1P53675 1640 aa16.75■□□□□ 0.27
HTT-213ENST00000513806 PLA2R1Q13018 1463 aa16.74■□□□□ 0.27
HTT-213ENST00000513806 ZNF142P52746 1687 aaPredicted RBP16.72■□□□□ 0.27
HTT-213ENST00000513806 DHX57Q6P158 1386 aaKnown RBP16.72■□□□□ 0.27
HTT-213ENST00000513806 CEP170BQ9Y4F5 1589 aaPredicted RBP16.72■□□□□ 0.27
HTT-213ENST00000513806 UBR1Q8IWV7 1749 aa16.71■□□□□ 0.27
HTT-213ENST00000513806 PTPRTO14522 1441 aa16.7■□□□□ 0.26
HTT-213ENST00000513806 TRPM2O94759 1503 aa16.7■□□□□ 0.26
HTT-213ENST00000513806 LMTK3Q96Q04 1460 aa16.7■□□□□ 0.26
HTT-213ENST00000513806 KIF1BO60333 1816 aa16.7■□□□□ 0.26
HTT-213ENST00000513806 UHRF1BP1Q6BDS2 1440 aa16.7■□□□□ 0.26
HTT-213ENST00000513806 HSPA2P54652 639 aa16.69■□□□□ 0.26
HTT-213ENST00000513806 IDI1Q13907 227 aa16.69■□□□□ 0.26
HTT-213ENST00000513806 A2ML1A8K2U0 1454 aa16.67■□□□□ 0.26
HTT-213ENST00000513806 CHGAP10645 457 aaKnown RBP16.67■□□□□ 0.26
HTT-213ENST00000513806 ACIN1Q9UKV3 1341 aaKnown RBP16.67■□□□□ 0.26
HTT-213ENST00000513806 TMEM131LA2VDJ0 1609 aa16.67■□□□□ 0.26
HTT-213ENST00000513806 NLRP1Q9C000 1473 aa16.66■□□□□ 0.26
HTT-213ENST00000513806 ADGRB3O60242 1522 aa16.65■□□□□ 0.26
HTT-213ENST00000513806 ANKRD30BQ9BXX2 1392 aa16.65■□□□□ 0.26
HTT-213ENST00000513806 SIN3AQ96ST3 1273 aa16.62■□□□□ 0.25
HTT-213ENST00000513806 SENP3Q9H4L4 574 aaPredicted RBP16.62■□□□□ 0.25
HTT-213ENST00000513806 STAG3Q9UJ98 1225 aa16.62■□□□□ 0.25
HTT-213ENST00000513806 CCDC144AA2RUR9 1427 aa16.62■□□□□ 0.25
HTT-213ENST00000513806 SLC52A1Q9NWF4 448 aa16.61■□□□□ 0.25
HTT-213ENST00000513806 STRCQ7RTU9 1775 aa16.61■□□□□ 0.25
HTT-213ENST00000513806 KDM5AP29375 1690 aaKnown RBP16.59■□□□□ 0.25
HTT-213ENST00000513806 NUTM2DQ5VT03 806 aaPredicted RBP16.59■□□□□ 0.25
HTT-213ENST00000513806 POLR1AO95602 1720 aaPredicted RBP16.59■□□□□ 0.25
HTT-213ENST00000513806 NEUROD1Q13562 356 aa16.57■□□□□ 0.24
HTT-213ENST00000513806 RGL3Q3MIN7 710 aa16.57■□□□□ 0.24
HTT-213ENST00000513806 ZNF326Q5BKZ1 582 aaKnown RBP16.57■□□□□ 0.24
HTT-213ENST00000513806 PPLO60437 1756 aa16.56■□□□□ 0.24
HTT-213ENST00000513806 NCKAP5LQ9HCH0 1330 aa16.56■□□□□ 0.24
HTT-213ENST00000513806 IFT172Q9UG01 1749 aa16.56■□□□□ 0.24
HTT-213ENST00000513806 SPATA31E1Q6ZUB1 1445 aa16.54■□□□□ 0.24
HTT-213ENST00000513806 LTKP29376 864 aa16.54■□□□□ 0.24
HTT-213ENST00000513806 THEMISQ8N1K5 641 aaPredicted RBP16.54■□□□□ 0.24
HTT-213ENST00000513806 CCER1Q8TC90 406 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms