RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 FAM135AQ9P2D6 1515 aa20.09■□□□□ 0.81
SFXN1-210ENST00000513725 FBXO31Q5XUX0 539 aaPredicted RBP20.07■□□□□ 0.8
SFXN1-210ENST00000513725 CSRNP3Q8WYN3 585 aa20.07■□□□□ 0.8
SFXN1-210ENST00000513725 ZNF772Q68DY9 489 aaPredicted RBP20.06■□□□□ 0.8
SFXN1-210ENST00000513725 UGGT1Q9NYU2 1555 aa20.06■□□□□ 0.8
SFXN1-210ENST00000513725 ATP7AQ04656 1500 aa20.04■□□□□ 0.8
SFXN1-210ENST00000513725 NLRP1Q9C000 1473 aa20.03■□□□□ 0.8
SFXN1-210ENST00000513725 FMN1Q68DA7 1419 aa20.02■□□□□ 0.79
SFXN1-210ENST00000513725 PZPP20742 1482 aa20■□□□□ 0.79
SFXN1-210ENST00000513725 JCADQ9P266 1359 aa20■□□□□ 0.79
SFXN1-210ENST00000513725 ZNF777Q9ULD5 760 aaPredicted RBP20■□□□□ 0.79
SFXN1-210ENST00000513725 ROBO1Q9Y6N7 1651 aa20■□□□□ 0.79
SFXN1-210ENST00000513725 RXRBP28702 533 aa19.99■□□□□ 0.79
SFXN1-210ENST00000513725 XIRP1Q702N8 1843 aaKnown RBP19.98■□□□□ 0.79
SFXN1-210ENST00000513725 FOXD1Q16676 465 aa19.98■□□□□ 0.79
SFXN1-210ENST00000513725 MIA2Q96PC5 1412 aa19.98■□□□□ 0.79
SFXN1-210ENST00000513725 SYCP2Q9BX26 1530 aa19.97■□□□□ 0.79
SFXN1-210ENST00000513725 INO80Q9ULG1 1556 aaPredicted RBP19.97■□□□□ 0.79
SFXN1-210ENST00000513725 HNRNPMP52272 730 aaKnown RBP eCLIP19.97■□□□□ 0.79
SFXN1-210ENST00000513725 MEX3CQ5U5Q3 659 aaKnown RBP19.97■□□□□ 0.79
SFXN1-210ENST00000513725 KDM5DQ9BY66 1539 aa19.97■□□□□ 0.79
SFXN1-210ENST00000513725 CDK12Q9NYV4 1490 aaPredicted RBP19.94■□□□□ 0.78
SFXN1-210ENST00000513725 CDC42BPAQ5VT25 1732 aa19.94■□□□□ 0.78
SFXN1-210ENST00000513725 ZC3H13Q5T200 1668 aaKnown RBP19.94■□□□□ 0.78
SFXN1-210ENST00000513725 ADGBQ8N7X0 1667 aa19.94■□□□□ 0.78
SFXN1-210ENST00000513725 LRRC9Q6ZRR7 1453 aa19.92■□□□□ 0.78
SFXN1-210ENST00000513725 ZRANB1Q9UGI0 708 aa19.91■□□□□ 0.78
SFXN1-210ENST00000513725 PHLPP1O60346 1717 aa19.9■□□□□ 0.78
SFXN1-210ENST00000513725 SPATA31A6Q5VVP1 1343 aa19.9■□□□□ 0.78
SFXN1-210ENST00000513725 WASHC2CQ9Y4E1 1318 aa19.89■□□□□ 0.77
SFXN1-210ENST00000513725 KIAA1107Q9UPP5 1409 aa19.88■□□□□ 0.77
SFXN1-210ENST00000513725 PLEKHH2Q8IVE3 1493 aa19.87■□□□□ 0.77
SFXN1-210ENST00000513725 TMEM94Q12767 1356 aa19.87■□□□□ 0.77
SFXN1-210ENST00000513725 LRP6O75581 1613 aa19.87■□□□□ 0.77
SFXN1-210ENST00000513725 SCAF11Q99590 1463 aaKnown RBP19.86■□□□□ 0.77
SFXN1-210ENST00000513725 LRRIQ1Q96JM4 1722 aa19.85■□□□□ 0.77
SFXN1-210ENST00000513725 KIF3BO15066 747 aa19.83■□□□□ 0.77
SFXN1-210ENST00000513725 DHX29Q7Z478 1369 aaKnown RBP19.83■□□□□ 0.76
SFXN1-210ENST00000513725 FGD6Q6ZV73 1430 aa19.81■□□□□ 0.76
SFXN1-210ENST00000513725 TXNDC2Q86VQ3 553 aa19.8■□□□□ 0.76
SFXN1-210ENST00000513725 SLAIN2Q9P270 581 aa19.8■□□□□ 0.76
SFXN1-210ENST00000513725 GPATCH8Q9UKJ3 1502 aaKnown RBP19.8■□□□□ 0.76
SFXN1-210ENST00000513725 SETBP1Q9Y6X0 1596 aa19.79■□□□□ 0.76
SFXN1-210ENST00000513725 PROSER2Q86WR7 435 aaPredicted RBP19.79■□□□□ 0.76
SFXN1-210ENST00000513725 COL16A1Q07092 1604 aaPredicted RBP19.78■□□□□ 0.76
SFXN1-210ENST00000513725 NUTM2BA6NNL0 878 aaPredicted RBP19.78■□□□□ 0.76
SFXN1-210ENST00000513725 NUTM2EB1AL46 878 aaPredicted RBP19.78■□□□□ 0.76
SFXN1-210ENST00000513725 NUTM2DQ5VT03 806 aaPredicted RBP19.78■□□□□ 0.76
SFXN1-210ENST00000513725 NUTM2AQ8IVF1 878 aaPredicted RBP19.78■□□□□ 0.76
SFXN1-210ENST00000513725 CFDP1Q9UEE9 299 aaPredicted RBP19.78■□□□□ 0.76
SFXN1-210ENST00000513725 MAP3K1Q13233 1512 aa19.77■□□□□ 0.76
SFXN1-210ENST00000513725 LTKP29376 864 aa19.77■□□□□ 0.76
SFXN1-210ENST00000513725 CCDC18Q5T9S5 1454 aa19.77■□□□□ 0.76
SFXN1-210ENST00000513725 MSH6P52701 1360 aa19.76■□□□□ 0.75
SFXN1-210ENST00000513725 RBM33Q96EV2 1170 aaKnown RBP19.76■□□□□ 0.75
SFXN1-210ENST00000513725 EID1Q9Y6B2 187 aa19.76■□□□□ 0.75
SFXN1-210ENST00000513725 EEA1Q15075 1411 aa19.76■□□□□ 0.75
SFXN1-210ENST00000513725 ARHGAP35Q9NRY4 1499 aa19.75■□□□□ 0.75
SFXN1-210ENST00000513725 KCNA6P17658 529 aa19.75■□□□□ 0.75
SFXN1-210ENST00000513725 RGS12O14924 1447 aa19.75■□□□□ 0.75
SFXN1-210ENST00000513725 CHIC1Q5VXU3 224 aa19.74■□□□□ 0.75
SFXN1-210ENST00000513725 RTEL1-TNFRSF6BF6WH68 1400 aa19.74■□□□□ 0.75
SFXN1-210ENST00000513725 UBR1Q8IWV7 1749 aa19.73■□□□□ 0.75
SFXN1-210ENST00000513725 ATAD2Q6PL18 1390 aa19.72■□□□□ 0.75
SFXN1-210ENST00000513725 ARHGAP23Q9P227 1491 aa19.72■□□□□ 0.75
SFXN1-210ENST00000513725 AFF2P51816 1311 aa19.72■□□□□ 0.75
SFXN1-210ENST00000513725 SLIT1O75093 1534 aa19.71■□□□□ 0.75
SFXN1-210ENST00000513725 RBM6P78332 1123 aaKnown RBP19.71■□□□□ 0.75
SFXN1-210ENST00000513725 SHPRHQ149N8 1683 aa19.71■□□□□ 0.75
SFXN1-210ENST00000513725 PRDM15P57071 1507 aaPredicted RBP19.7■□□□□ 0.74
SFXN1-210ENST00000513725 ERVK-7P63135 1459 aa19.68■□□□□ 0.74
SFXN1-210ENST00000513725 TIAM1Q13009 1591 aa19.68■□□□□ 0.74
SFXN1-210ENST00000513725 NCOA2Q15596 1464 aa19.67■□□□□ 0.74
SFXN1-210ENST00000513725 QTRT2Q9H974 415 aaKnown RBP19.67■□□□□ 0.74
SFXN1-210ENST00000513725 ABCC3O15438 1527 aa19.66■□□□□ 0.74
SFXN1-210ENST00000513725 CCNB3Q8WWL7 1395 aa19.66■□□□□ 0.74
SFXN1-210ENST00000513725 NKTRP30414 1462 aaKnown RBP19.66■□□□□ 0.74
SFXN1-210ENST00000513725 CASKIN1Q8WXD9 1431 aa19.64■□□□□ 0.73
SFXN1-210ENST00000513725 UBTFP17480 764 aaKnown RBP19.63■□□□□ 0.73
SFXN1-210ENST00000513725 NGLY1Q96IV0 654 aa19.63■□□□□ 0.73
SFXN1-210ENST00000513725 MBD5Q9P267 1494 aa19.61■□□□□ 0.73
SFXN1-210ENST00000513725 AHDC1Q5TGY3 1603 aaPredicted RBP19.61■□□□□ 0.73
SFXN1-210ENST00000513725 CCDC125Q86Z20 511 aa19.6■□□□□ 0.73
SFXN1-210ENST00000513725 SLC26A8Q96RN1 970 aa19.6■□□□□ 0.73
SFXN1-210ENST00000513725 ZNF644Q9H582 1327 aaPredicted RBP19.59■□□□□ 0.73
SFXN1-210ENST00000513725 TMEM2Q9UHN6 1383 aa19.58■□□□□ 0.73
SFXN1-210ENST00000513725 NWD1Q149M9 1564 aa19.57■□□□□ 0.72
SFXN1-210ENST00000513725 KDM5AP29375 1690 aaKnown RBP19.57■□□□□ 0.72
SFXN1-210ENST00000513725 C8orf37Q96NL8 207 aa19.57■□□□□ 0.72
SFXN1-210ENST00000513725 LRP5O75197 1615 aa19.55■□□□□ 0.72
SFXN1-210ENST00000513725 STAG3Q9UJ98 1225 aa19.55■□□□□ 0.72
SFXN1-210ENST00000513725 CFAP65Q6ZU64 1925 aaKnown RBP19.54■□□□□ 0.72
SFXN1-210ENST00000513725 TET3O43151 1660 aa19.53■□□□□ 0.72
SFXN1-210ENST00000513725 DIP2AQ14689 1571 aa19.53■□□□□ 0.72
SFXN1-210ENST00000513725 EP400Q96L91 3159 aa19.52■□□□□ 0.72
SFXN1-210ENST00000513725 EHMT2Q96KQ7 1210 aa19.52■□□□□ 0.72
SFXN1-210ENST00000513725 C14orf37Q86TY3 774 aa19.51■□□□□ 0.71
SFXN1-210ENST00000513725 CADPS2Q86UW7 1296 aa19.51■□□□□ 0.71
SFXN1-210ENST00000513725 CAMSAP2Q08AD1 1489 aa19.51■□□□□ 0.71
SFXN1-210ENST00000513725 CCDC141Q6ZP82 1450 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms