RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 MAP3K1Q13233 1512 aa15.65■□□□□ 0.1
CCL28-203ENST00000513525 MBD5Q9P267 1494 aa15.65■□□□□ 0.1
CCL28-203ENST00000513525 LOC105371045A0A1W2PR82 267 aa15.64■□□□□ 0.09
CCL28-203ENST00000513525 CNTLNQ9NXG0 1405 aa15.63■□□□□ 0.09
CCL28-203ENST00000513525 LRRC9Q6ZRR7 1453 aa15.62■□□□□ 0.09
CCL28-203ENST00000513525 CLTCQ00610 1675 aaKnown RBP15.62■□□□□ 0.09
CCL28-203ENST00000513525 A2MP01023 1474 aa15.62■□□□□ 0.09
CCL28-203ENST00000513525 CAMSAP2Q08AD1 1489 aa15.62■□□□□ 0.09
CCL28-203ENST00000513525 ARHGEF5Q12774 1597 aa15.61■□□□□ 0.09
CCL28-203ENST00000513525 RTEL1-TNFRSF6BF6WH68 1400 aa15.61■□□□□ 0.09
CCL28-203ENST00000513525 STRCQ7RTU9 1775 aa15.61■□□□□ 0.09
CCL28-203ENST00000513525 ZNF644Q9H582 1327 aaPredicted RBP15.6■□□□□ 0.09
CCL28-203ENST00000513525 CCDC141Q6ZP82 1450 aa15.6■□□□□ 0.09
CCL28-203ENST00000513525 CEBPAP49715 358 aaPredicted RBP15.59■□□□□ 0.09
CCL28-203ENST00000513525 ILDR1Q86SU0 546 aaPredicted RBP15.59■□□□□ 0.09
CCL28-203ENST00000513525 UHRF1BP1Q6BDS2 1440 aa15.59■□□□□ 0.09
CCL28-203ENST00000513525 HSPA2P54652 639 aa15.58■□□□□ 0.09
CCL28-203ENST00000513525 ESF1Q9H501 851 aaKnown RBP15.58■□□□□ 0.08
CCL28-203ENST00000513525 ZNF142P52746 1687 aaPredicted RBP15.55■□□□□ 0.08
CCL28-203ENST00000513525 MAST1Q9Y2H9 1570 aa15.55■□□□□ 0.08
CCL28-203ENST00000513525 NPATQ14207 1427 aa15.54■□□□□ 0.08
CCL28-203ENST00000513525 RSPH4AQ5TD94 716 aa15.54■□□□□ 0.08
CCL28-203ENST00000513525 REM2Q8IYK8 340 aaPredicted RBP15.54■□□□□ 0.08
CCL28-203ENST00000513525 FOXD4L1Q9NU39 408 aa15.53■□□□□ 0.08
CCL28-203ENST00000513525 FAM135AQ9P2D6 1515 aa15.53■□□□□ 0.08
CCL28-203ENST00000513525 DHX29Q7Z478 1369 aaKnown RBP15.52■□□□□ 0.08
CCL28-203ENST00000513525 MYO3AQ8NEV4 1616 aa15.52■□□□□ 0.08
CCL28-203ENST00000513525 MIA2Q96PC5 1412 aa15.51■□□□□ 0.07
CCL28-203ENST00000513525 ZMYM3Q14202 1370 aa15.51■□□□□ 0.07
CCL28-203ENST00000513525 CROCC2H7BZ55 1655 aa15.51■□□□□ 0.07
CCL28-203ENST00000513525 PIP4P2Q8N4L2 257 aa15.51■□□□□ 0.07
CCL28-203ENST00000513525 MYOM3Q5VTT5 1437 aa15.51■□□□□ 0.07
CCL28-203ENST00000513525 KANK4Q5T7N3 995 aaPredicted RBP15.49■□□□□ 0.07
CCL28-203ENST00000513525 EIF2AK4Q9P2K8 1649 aaKnown RBP15.49■□□□□ 0.07
CCL28-203ENST00000513525 RNF17Q9BXT8 1623 aaKnown RBP15.48■□□□□ 0.07
CCL28-203ENST00000513525 ZC3H13Q5T200 1668 aaKnown RBP15.47■□□□□ 0.07
CCL28-203ENST00000513525 PTPRKQ15262 1439 aa15.47■□□□□ 0.07
CCL28-203ENST00000513525 KDM5DQ9BY66 1539 aa15.47■□□□□ 0.07
CCL28-203ENST00000513525 GGT6Q6P531 493 aa15.47■□□□□ 0.07
CCL28-203ENST00000513525 FBXO41Q8TF61 875 aa15.47■□□□□ 0.07
CCL28-203ENST00000513525 ATF5Q9Y2D1 282 aaPredicted RBP15.47■□□□□ 0.07
CCL28-203ENST00000513525 CEP170BQ9Y4F5 1589 aaPredicted RBP15.47■□□□□ 0.07
CCL28-203ENST00000513525 PTPN23Q9H3S7 1636 aa15.46■□□□□ 0.07
CCL28-203ENST00000513525 CAMSAP1Q5T5Y3 1602 aa15.45■□□□□ 0.06
CCL28-203ENST00000513525 TSPY4P0CV99 314 aa15.44■□□□□ 0.06
CCL28-203ENST00000513525 TSPY10P0CW01 314 aa15.44■□□□□ 0.06
CCL28-203ENST00000513525 SLC4A1APQ9BWU0 796 aaKnown RBP15.44■□□□□ 0.06
CCL28-203ENST00000513525 PTPRTO14522 1441 aa15.44■□□□□ 0.06
CCL28-203ENST00000513525 NCOA1Q15788 1441 aa15.44■□□□□ 0.06
CCL28-203ENST00000513525 DNMT1P26358 1616 aaKnown RBP15.42■□□□□ 0.06
CCL28-203ENST00000513525 KIF3BO15066 747 aa15.42■□□□□ 0.06
CCL28-203ENST00000513525 PZPP20742 1482 aa15.42■□□□□ 0.06
CCL28-203ENST00000513525 SHANK2Q9UPX8 1470 aa15.42■□□□□ 0.06
CCL28-203ENST00000513525 POLR1AO95602 1720 aaPredicted RBP15.41■□□□□ 0.06
CCL28-203ENST00000513525 MROH1Q8NDA8 1641 aa15.41■□□□□ 0.06
CCL28-203ENST00000513525 HAX1O00165 279 aa15.41■□□□□ 0.06
CCL28-203ENST00000513525 PLA2R1Q13018 1463 aa15.41■□□□□ 0.06
CCL28-203ENST00000513525 CEP152O94986 1710 aa15.41■□□□□ 0.06
CCL28-203ENST00000513525 DUOX2Q9NRD8 1548 aa15.4■□□□□ 0.06
CCL28-203ENST00000513525 TCOF1Q13428 1488 aaKnown RBP15.39■□□□□ 0.05
CCL28-203ENST00000513525 A2ML1A8K2U0 1454 aa15.39■□□□□ 0.05
CCL28-203ENST00000513525 CFAP65Q6ZU64 1925 aaKnown RBP15.38■□□□□ 0.05
CCL28-203ENST00000513525 FGD6Q6ZV73 1430 aa15.38■□□□□ 0.05
CCL28-203ENST00000513525 PITPNM1O00562 1244 aa15.38■□□□□ 0.05
CCL28-203ENST00000513525 CERKQ8TCT0 537 aa15.38■□□□□ 0.05
CCL28-203ENST00000513525 ABCC3O15438 1527 aa15.36■□□□□ 0.05
CCL28-203ENST00000513525 DEPDC5O75140 1603 aa15.36■□□□□ 0.05
CCL28-203ENST00000513525 ABCC5O15440 1437 aa15.36■□□□□ 0.05
CCL28-203ENST00000513525 LTBP4Q8N2S1 1624 aa15.36■□□□□ 0.05
CCL28-203ENST00000513525 FXR2P51116 673 aaKnown RBP eCLIP15.35■□□□□ 0.05
CCL28-203ENST00000513525 DAPK1P53355 1430 aa15.35■□□□□ 0.05
CCL28-203ENST00000513525 PRDM15P57071 1507 aaPredicted RBP15.35■□□□□ 0.05
CCL28-203ENST00000513525 WASHC2CQ9Y4E1 1318 aa15.35■□□□□ 0.05
CCL28-203ENST00000513525 SPATA31D1Q6ZQQ2 1576 aa15.34■□□□□ 0.05
CCL28-203ENST00000513525 ERBINQ96RT1 1412 aa15.34■□□□□ 0.05
CCL28-203ENST00000513525 TNRQ92752 1358 aa15.33■□□□□ 0.05
CCL28-203ENST00000513525 NLRP1Q9C000 1473 aa15.33■□□□□ 0.04
CCL28-203ENST00000513525 PKD2Q13563 968 aa15.32■□□□□ 0.04
CCL28-203ENST00000513525 IQSEC2Q5JU85 1478 aa15.31■□□□□ 0.04
CCL28-203ENST00000513525 KIF15Q9NS87 1388 aa15.31■□□□□ 0.04
CCL28-203ENST00000513525 NEURL4Q96JN8 1562 aa15.3■□□□□ 0.04
CCL28-203ENST00000513525 FBXO31Q5XUX0 539 aaPredicted RBP15.3■□□□□ 0.04
CCL28-203ENST00000513525 UGGT1Q9NYU2 1555 aa15.29■□□□□ 0.04
CCL28-203ENST00000513525 NCKAP5LQ9HCH0 1330 aa15.29■□□□□ 0.04
CCL28-203ENST00000513525 ERVK-7P63135 1459 aa15.29■□□□□ 0.04
CCL28-203ENST00000513525 UBR1Q8IWV7 1749 aa15.28■□□□□ 0.04
CCL28-203ENST00000513525 ADGRL2O95490 1459 aa15.28■□□□□ 0.04
CCL28-203ENST00000513525 VWDEQ8N2E2 1590 aa15.26■□□□□ 0.03
CCL28-203ENST00000513525 ARHGAP31Q2M1Z3 1444 aa15.26■□□□□ 0.03
CCL28-203ENST00000513525 ANKRD30AQ9BXX3 1397 aa15.26■□□□□ 0.03
CCL28-203ENST00000513525 IQGAP1P46940 1657 aa15.24■□□□□ 0.03
CCL28-203ENST00000513525 RRP7BPQ9NSQ0 103 aa15.24■□□□□ 0.03
CCL28-203ENST00000513525 LMTK2Q8IWU2 1503 aa15.24■□□□□ 0.03
CCL28-203ENST00000513525 KDM5AP29375 1690 aaKnown RBP15.24■□□□□ 0.03
CCL28-203ENST00000513525 MED14O60244 1454 aa15.23■□□□□ 0.03
CCL28-203ENST00000513525 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.22■□□□□ 0.03
CCL28-203ENST00000513525 THEMISQ8N1K5 641 aaPredicted RBP15.22■□□□□ 0.03
CCL28-203ENST00000513525 ZNF335Q9H4Z2 1342 aaPredicted RBP15.21■□□□□ 0.02
CCL28-203ENST00000513525 KANK1Q14678 1352 aa15.2■□□□□ 0.02
CCL28-203ENST00000513525 PIK3C2BO00750 1634 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms