RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-223ENST00000513495 KANK1Q14678 1352 aa23.48■■□□□ 1.35
SH3TC1-223ENST00000513495 RNF17Q9BXT8 1623 aaKnown RBP23.48■■□□□ 1.35
SH3TC1-223ENST00000513495 PPP6R1Q9UPN7 881 aa23.46■■□□□ 1.35
SH3TC1-223ENST00000513495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.44■■□□□ 1.34
SH3TC1-223ENST00000513495 PCGF6Q9BYE7 350 aa23.43■■□□□ 1.34
SH3TC1-223ENST00000513495 DEPDC5O75140 1603 aa23.43■■□□□ 1.34
SH3TC1-223ENST00000513495 FAM135AQ9P2D6 1515 aa23.43■■□□□ 1.34
SH3TC1-223ENST00000513495 UNC13BO14795 1591 aa23.41■■□□□ 1.34
SH3TC1-223ENST00000513495 PRDM15P57071 1507 aaPredicted RBP23.41■■□□□ 1.34
SH3TC1-223ENST00000513495 WASHC2CQ9Y4E1 1318 aa23.4■■□□□ 1.34
SH3TC1-223ENST00000513495 TRIM52Q96A61 297 aa23.4■■□□□ 1.34
SH3TC1-223ENST00000513495 CNTLNQ9NXG0 1405 aa23.4■■□□□ 1.34
SH3TC1-223ENST00000513495 FER1L4A9Z1Z3 1794 aa23.4■■□□□ 1.34
SH3TC1-223ENST00000513495 RAB3GAP2Q9H2M9 1393 aa23.4■■□□□ 1.34
SH3TC1-223ENST00000513495 KDM5DQ9BY66 1539 aa23.38■■□□□ 1.33
SH3TC1-223ENST00000513495 ZC3H13Q5T200 1668 aaKnown RBP23.38■■□□□ 1.33
SH3TC1-223ENST00000513495 NUP155O75694 1391 aa23.38■■□□□ 1.33
SH3TC1-223ENST00000513495 MROH1Q8NDA8 1641 aa23.37■■□□□ 1.33
SH3TC1-223ENST00000513495 HRCP23327 699 aa23.37■■□□□ 1.33
SH3TC1-223ENST00000513495 ADAMTSL3P82987 1691 aa23.37■■□□□ 1.33
SH3TC1-223ENST00000513495 MADDQ8WXG6 1647 aa23.35■■□□□ 1.33
SH3TC1-223ENST00000513495 CLTCQ00610 1675 aaKnown RBP23.34■■□□□ 1.33
SH3TC1-223ENST00000513495 IQGAP3Q86VI3 1631 aa23.32■■□□□ 1.32
SH3TC1-223ENST00000513495 ABCC3O15438 1527 aa23.32■■□□□ 1.32
SH3TC1-223ENST00000513495 RIMS1Q86UR5 1692 aaKnown RBP23.32■■□□□ 1.32
SH3TC1-223ENST00000513495 CEP152O94986 1710 aa23.31■■□□□ 1.32
SH3TC1-223ENST00000513495 MROH2AA6NES4 1674 aa23.31■■□□□ 1.32
SH3TC1-223ENST00000513495 VWDEQ8N2E2 1590 aa23.31■■□□□ 1.32
SH3TC1-223ENST00000513495 LMTK2Q8IWU2 1503 aa23.29■■□□□ 1.32
SH3TC1-223ENST00000513495 CAMSAP1Q5T5Y3 1602 aa23.27■■□□□ 1.32
SH3TC1-223ENST00000513495 TET3O43151 1660 aa23.27■■□□□ 1.32
SH3TC1-223ENST00000513495 AEBP2Q6ZN18 517 aaPredicted RBP23.26■■□□□ 1.31
SH3TC1-223ENST00000513495 SLC4A1APQ9BWU0 796 aaKnown RBP23.26■■□□□ 1.31
SH3TC1-223ENST00000513495 ZMYM3Q14202 1370 aa23.26■■□□□ 1.31
SH3TC1-223ENST00000513495 KDM4FA0A1W2PPD8 638 aa23.24■■□□□ 1.31
SH3TC1-223ENST00000513495 EFCAB6Q5THR3 1501 aa23.23■■□□□ 1.31
SH3TC1-223ENST00000513495 ARHGAP31Q2M1Z3 1444 aa23.22■■□□□ 1.31
SH3TC1-223ENST00000513495 PTPRMP28827 1452 aa23.22■■□□□ 1.31
SH3TC1-223ENST00000513495 PLPPR3Q6T4P5 718 aa23.21■■□□□ 1.31
SH3TC1-223ENST00000513495 PZPP20742 1482 aa23.21■■□□□ 1.31
SH3TC1-223ENST00000513495 C3P01024 1663 aa23.2■■□□□ 1.3
SH3TC1-223ENST00000513495 RPRD2Q5VT52 1461 aaKnown RBP23.2■■□□□ 1.3
SH3TC1-223ENST00000513495 MPHOSPH9Q99550 1183 aa23.2■■□□□ 1.3
SH3TC1-223ENST00000513495 PKD2Q13563 968 aa23.17■■□□□ 1.3
SH3TC1-223ENST00000513495 NPATQ14207 1427 aa23.16■■□□□ 1.3
SH3TC1-223ENST00000513495 CEBPAP49715 358 aaPredicted RBP23.16■■□□□ 1.3
SH3TC1-223ENST00000513495 E9PCH4 1651 aa23.16■■□□□ 1.3
SH3TC1-223ENST00000513495 CFAP65Q6ZU64 1925 aaKnown RBP23.13■■□□□ 1.29
SH3TC1-223ENST00000513495 PREX1Q8TCU6 1659 aa23.12■■□□□ 1.29
SH3TC1-223ENST00000513495 ERVK-7P63135 1459 aa23.11■■□□□ 1.29
SH3TC1-223ENST00000513495 FBXO31Q5XUX0 539 aaPredicted RBP23.1■■□□□ 1.29
SH3TC1-223ENST00000513495 SPATA31D1Q6ZQQ2 1576 aa23.1■■□□□ 1.29
SH3TC1-223ENST00000513495 TNRQ92752 1358 aa23.09■■□□□ 1.29
SH3TC1-223ENST00000513495 SPHKAPQ2M3C7 1700 aa23.08■■□□□ 1.28
SH3TC1-223ENST00000513495 SETD1BQ9UPS6 1966 aaKnown RBP23.07■■□□□ 1.28
SH3TC1-223ENST00000513495 NOS1P29475 1434 aa23.06■■□□□ 1.28
SH3TC1-223ENST00000513495 FOXD1Q16676 465 aa23.04■■□□□ 1.28
SH3TC1-223ENST00000513495 PTPRTO14522 1441 aa23.03■■□□□ 1.28
SH3TC1-223ENST00000513495 SLC52A1Q9NWF4 448 aa23.03■■□□□ 1.28
SH3TC1-223ENST00000513495 DHX57Q6P158 1386 aaKnown RBP23.02■■□□□ 1.28
SH3TC1-223ENST00000513495 NLRP1Q9C000 1473 aa23.02■■□□□ 1.28
SH3TC1-223ENST00000513495 TRPM2O94759 1503 aa23.02■■□□□ 1.28
SH3TC1-223ENST00000513495 SYNMO15061 1565 aa23.01■■□□□ 1.27
SH3TC1-223ENST00000513495 UHRF1BP1Q6BDS2 1440 aa23■■□□□ 1.27
SH3TC1-223ENST00000513495 MYO3AQ8NEV4 1616 aa23■■□□□ 1.27
SH3TC1-223ENST00000513495 CCDC144AA2RUR9 1427 aa22.99■■□□□ 1.27
SH3TC1-223ENST00000513495 STAG3Q9UJ98 1225 aa22.98■■□□□ 1.27
SH3TC1-223ENST00000513495 PLA2R1Q13018 1463 aa22.95■■□□□ 1.26
SH3TC1-223ENST00000513495 ANKRD30BQ9BXX2 1392 aa22.95■■□□□ 1.26
SH3TC1-223ENST00000513495 PIK3C2BO00750 1634 aa22.94■■□□□ 1.26
SH3TC1-223ENST00000513495 A2ML1A8K2U0 1454 aa22.94■■□□□ 1.26
SH3TC1-223ENST00000513495 IDI1Q13907 227 aa22.94■■□□□ 1.26
SH3TC1-223ENST00000513495 CCER1Q8TC90 406 aaPredicted RBP22.94■■□□□ 1.26
SH3TC1-223ENST00000513495 CEP170BQ9Y4F5 1589 aaPredicted RBP22.93■■□□□ 1.26
SH3TC1-223ENST00000513495 CHGAP10645 457 aaKnown RBP22.93■■□□□ 1.26
SH3TC1-223ENST00000513495 ZNF142P52746 1687 aaPredicted RBP22.93■■□□□ 1.26
SH3TC1-223ENST00000513495 CLTCL1P53675 1640 aa22.92■■□□□ 1.26
SH3TC1-223ENST00000513495 UGGT1Q9NYU2 1555 aa22.92■■□□□ 1.26
SH3TC1-223ENST00000513495 KIF1BO60333 1816 aa22.92■■□□□ 1.26
SH3TC1-223ENST00000513495 KDM5AP29375 1690 aaKnown RBP22.9■■□□□ 1.26
SH3TC1-223ENST00000513495 ADGRB3O60242 1522 aa22.89■■□□□ 1.26
SH3TC1-223ENST00000513495 THEMISQ8N1K5 641 aaPredicted RBP22.89■■□□□ 1.25
SH3TC1-223ENST00000513495 CLSPNQ9HAW4 1339 aa22.88■■□□□ 1.25
SH3TC1-223ENST00000513495 UBR1Q8IWV7 1749 aa22.86■■□□□ 1.25
SH3TC1-223ENST00000513495 TMEM131LA2VDJ0 1609 aa22.84■■□□□ 1.25
SH3TC1-223ENST00000513495 ZNF326Q5BKZ1 582 aaKnown RBP22.84■■□□□ 1.25
SH3TC1-223ENST00000513495 LMTK3Q96Q04 1460 aa22.84■■□□□ 1.25
SH3TC1-223ENST00000513495 HDGFP51858 240 aaKnown RBP22.83■■□□□ 1.25
SH3TC1-223ENST00000513495 NEURL4Q96JN8 1562 aa22.8■■□□□ 1.24
SH3TC1-223ENST00000513495 NEUROD1Q13562 356 aa22.8■■□□□ 1.24
SH3TC1-223ENST00000513495 MYO5BQ9ULV0 1848 aa22.8■■□□□ 1.24
SH3TC1-223ENST00000513495 EID1Q9Y6B2 187 aa22.79■■□□□ 1.24
SH3TC1-223ENST00000513495 RPGRIP1LQ68CZ1 1315 aa22.78■■□□□ 1.24
SH3TC1-223ENST00000513495 SPATA31E1Q6ZUB1 1445 aa22.77■■□□□ 1.24
SH3TC1-223ENST00000513495 RGL3Q3MIN7 710 aa22.77■■□□□ 1.24
SH3TC1-223ENST00000513495 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.77■■□□□ 1.24
SH3TC1-223ENST00000513495 SIN3AQ96ST3 1273 aa22.77■■□□□ 1.24
SH3TC1-223ENST00000513495 TMEM2Q9UHN6 1383 aa22.76■■□□□ 1.23
SH3TC1-223ENST00000513495 PPP1R15AO75807 674 aaPredicted RBP22.75■■□□□ 1.23
SH3TC1-223ENST00000513495 HSPA2P54652 639 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms