RNA–Protein interactions for RNA: ENST00000513464.5

SLC41A3-217, Transcript of solute carrier family 41 member 3, humanhuman

TSL 2

Gene SLC41A3, Length 591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC41A3-217ENST00000513464 SHANK2Q9UPX8 1470 aa27.25■■□□□ 1.95
SLC41A3-217ENST00000513464 EIF2AK4Q9P2K8 1649 aaKnown RBP27.25■■□□□ 1.95
SLC41A3-217ENST00000513464 ABCC5O15440 1437 aa27.24■■□□□ 1.95
SLC41A3-217ENST00000513464 MYO3AQ8NEV4 1616 aa27.24■■□□□ 1.95
SLC41A3-217ENST00000513464 RNF17Q9BXT8 1623 aaKnown RBP27.24■■□□□ 1.95
SLC41A3-217ENST00000513464 ZNF142P52746 1687 aaPredicted RBP27.23■■□□□ 1.95
SLC41A3-217ENST00000513464 DNMT1P26358 1616 aaKnown RBP27.23■■□□□ 1.95
SLC41A3-217ENST00000513464 WASHC2CQ9Y4E1 1318 aa27.22■■□□□ 1.95
SLC41A3-217ENST00000513464 DUOX2Q9NRD8 1548 aa27.21■■□□□ 1.95
SLC41A3-217ENST00000513464 DAPK1P53355 1430 aa27.21■■□□□ 1.95
SLC41A3-217ENST00000513464 NCOA1Q15788 1441 aa27.19■■□□□ 1.94
SLC41A3-217ENST00000513464 PZPP20742 1482 aa27.19■■□□□ 1.94
SLC41A3-217ENST00000513464 CEP170BQ9Y4F5 1589 aaPredicted RBP27.18■■□□□ 1.94
SLC41A3-217ENST00000513464 CAMSAP1Q5T5Y3 1602 aa27.18■■□□□ 1.94
SLC41A3-217ENST00000513464 PTPRTO14522 1441 aa27.17■■□□□ 1.94
SLC41A3-217ENST00000513464 FBXO41Q8TF61 875 aa27.17■■□□□ 1.94
SLC41A3-217ENST00000513464 ZC3H13Q5T200 1668 aaKnown RBP27.17■■□□□ 1.94
SLC41A3-217ENST00000513464 KIF15Q9NS87 1388 aa27.14■■□□□ 1.94
SLC41A3-217ENST00000513464 MROH1Q8NDA8 1641 aa27.14■■□□□ 1.94
SLC41A3-217ENST00000513464 ABCC3O15438 1527 aa27.13■■□□□ 1.93
SLC41A3-217ENST00000513464 FBXO31Q5XUX0 539 aaPredicted RBP27.13■■□□□ 1.93
SLC41A3-217ENST00000513464 ERBINQ96RT1 1412 aa27.12■■□□□ 1.93
SLC41A3-217ENST00000513464 A2ML1A8K2U0 1454 aa27.12■■□□□ 1.93
SLC41A3-217ENST00000513464 PLA2R1Q13018 1463 aa27.12■■□□□ 1.93
SLC41A3-217ENST00000513464 TNRQ92752 1358 aa27.11■■□□□ 1.93
SLC41A3-217ENST00000513464 RRP7BPQ9NSQ0 103 aa27.11■■□□□ 1.93
SLC41A3-217ENST00000513464 CERKQ8TCT0 537 aa27.08■■□□□ 1.93
SLC41A3-217ENST00000513464 ANKRD30AQ9BXX3 1397 aa27.07■■□□□ 1.92
SLC41A3-217ENST00000513464 CEP152O94986 1710 aa27.06■■□□□ 1.92
SLC41A3-217ENST00000513464 PRDM15P57071 1507 aaPredicted RBP27.06■■□□□ 1.92
SLC41A3-217ENST00000513464 PKD2Q13563 968 aa27.05■■□□□ 1.92
SLC41A3-217ENST00000513464 CHIC2Q9UKJ5 165 aa27.04■■□□□ 1.92
SLC41A3-217ENST00000513464 DEPDC5O75140 1603 aa27.04■■□□□ 1.92
SLC41A3-217ENST00000513464 ADGRL2O95490 1459 aa27.03■■□□□ 1.92
SLC41A3-217ENST00000513464 FAM50AQ14320 339 aaKnown RBP27.03■■□□□ 1.92
SLC41A3-217ENST00000513464 SPATA31D1Q6ZQQ2 1576 aa27.03■■□□□ 1.92
SLC41A3-217ENST00000513464 NLRP1Q9C000 1473 aa27.03■■□□□ 1.92
SLC41A3-217ENST00000513464 NCKAP5LQ9HCH0 1330 aa27.03■■□□□ 1.92
SLC41A3-217ENST00000513464 ERVK-7P63135 1459 aa26.98■■□□□ 1.91
SLC41A3-217ENST00000513464 CFAP65Q6ZU64 1925 aaKnown RBP26.97■■□□□ 1.91
SLC41A3-217ENST00000513464 ARHGAP31Q2M1Z3 1444 aa26.97■■□□□ 1.91
SLC41A3-217ENST00000513464 LTBP4Q8N2S1 1624 aa26.97■■□□□ 1.91
SLC41A3-217ENST00000513464 UGGT1Q9NYU2 1555 aa26.96■■□□□ 1.91
SLC41A3-217ENST00000513464 POLR1AO95602 1720 aaPredicted RBP26.95■■□□□ 1.9
SLC41A3-217ENST00000513464 THEMISQ8N1K5 641 aaPredicted RBP26.94■■□□□ 1.9
SLC41A3-217ENST00000513464 KANK1Q14678 1352 aa26.94■■□□□ 1.9
SLC41A3-217ENST00000513464 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.93■■□□□ 1.9
SLC41A3-217ENST00000513464 VWDEQ8N2E2 1590 aa26.92■■□□□ 1.9
SLC41A3-217ENST00000513464 LMTK2Q8IWU2 1503 aa26.91■■□□□ 1.9
SLC41A3-217ENST00000513464 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.89■■□□□ 1.9
SLC41A3-217ENST00000513464 NEURL4Q96JN8 1562 aa26.88■■□□□ 1.89
SLC41A3-217ENST00000513464 ANKRD50Q9ULJ7 1429 aa26.88■■□□□ 1.89
SLC41A3-217ENST00000513464 ANKLE2Q86XL3 938 aa26.87■■□□□ 1.89
SLC41A3-217ENST00000513464 IQSEC2Q5JU85 1478 aa26.86■■□□□ 1.89
SLC41A3-217ENST00000513464 PPARGC1BQ86YN6 1023 aaKnown RBP26.85■■□□□ 1.89
SLC41A3-217ENST00000513464 UBR1Q8IWV7 1749 aa26.85■■□□□ 1.89
SLC41A3-217ENST00000513464 ZNF335Q9H4Z2 1342 aaPredicted RBP26.84■■□□□ 1.89
SLC41A3-217ENST00000513464 ROCK1Q13464 1354 aa26.84■■□□□ 1.89
SLC41A3-217ENST00000513464 MED14O60244 1454 aa26.82■■□□□ 1.88
SLC41A3-217ENST00000513464 EFCAB6Q5THR3 1501 aa26.8■■□□□ 1.88
SLC41A3-217ENST00000513464 NPHP4O75161 1426 aaPredicted RBP26.77■■□□□ 1.88
SLC41A3-217ENST00000513464 UNC13BO14795 1591 aa26.76■■□□□ 1.87
SLC41A3-217ENST00000513464 PIK3C2BO00750 1634 aa26.76■■□□□ 1.87
SLC41A3-217ENST00000513464 IQGAP1P46940 1657 aa26.75■■□□□ 1.87
SLC41A3-217ENST00000513464 NOS1P29475 1434 aa26.74■■□□□ 1.87
SLC41A3-217ENST00000513464 KDM5AP29375 1690 aaKnown RBP26.74■■□□□ 1.87
SLC41A3-217ENST00000513464 SLIT1O75093 1534 aa26.74■■□□□ 1.87
SLC41A3-217ENST00000513464 RPRD2Q5VT52 1461 aaKnown RBP26.74■■□□□ 1.87
SLC41A3-217ENST00000513464 ARHGAP23Q9P227 1491 aa26.74■■□□□ 1.87
SLC41A3-217ENST00000513464 SYNMO15061 1565 aa26.73■■□□□ 1.87
SLC41A3-217ENST00000513464 TET3O43151 1660 aa26.73■■□□□ 1.87
SLC41A3-217ENST00000513464 RRBP1Q9P2E9 1410 aaKnown RBP26.72■■□□□ 1.87
SLC41A3-217ENST00000513464 ITGAEP38570 1179 aa26.71■■□□□ 1.87
SLC41A3-217ENST00000513464 GCC2Q8IWJ2 1684 aa26.7■■□□□ 1.87
SLC41A3-217ENST00000513464 IDI1Q13907 227 aa26.7■■□□□ 1.86
SLC41A3-217ENST00000513464 CPS1P31327 1500 aa26.7■■□□□ 1.86
SLC41A3-217ENST00000513464 SCAF11Q99590 1463 aaKnown RBP26.68■■□□□ 1.86
SLC41A3-217ENST00000513464 SLC52A1Q9NWF4 448 aa26.67■■□□□ 1.86
SLC41A3-217ENST00000513464 IQGAP3Q86VI3 1631 aa26.65■■□□□ 1.86
SLC41A3-217ENST00000513464 LTKP29376 864 aa26.65■■□□□ 1.86
SLC41A3-217ENST00000513464 TXNDC2Q86VQ3 553 aa26.65■■□□□ 1.86
SLC41A3-217ENST00000513464 STAG3Q9UJ98 1225 aa26.65■■□□□ 1.86
SLC41A3-217ENST00000513464 TMEM2Q9UHN6 1383 aa26.65■■□□□ 1.86
SLC41A3-217ENST00000513464 EID1Q9Y6B2 187 aa26.63■■□□□ 1.85
SLC41A3-217ENST00000513464 ADGRB3O60242 1522 aa26.62■■□□□ 1.85
SLC41A3-217ENST00000513464 E9PCH4 1651 aa26.61■■□□□ 1.85
SLC41A3-217ENST00000513464 NUP155O75694 1391 aa26.58■■□□□ 1.85
SLC41A3-217ENST00000513464 STRCP1A6NGW2 1772 aa26.58■■□□□ 1.85
SLC41A3-217ENST00000513464 UBAP1LF5GYI3 381 aa26.57■■□□□ 1.84
SLC41A3-217ENST00000513464 MYO5BQ9ULV0 1848 aa26.53■■□□□ 1.84
SLC41A3-217ENST00000513464 TMEM131LA2VDJ0 1609 aa26.52■■□□□ 1.84
SLC41A3-217ENST00000513464 NAIPQ13075 1403 aa26.5■■□□□ 1.83
SLC41A3-217ENST00000513464 LRRC7Q96NW7 1537 aa26.49■■□□□ 1.83
SLC41A3-217ENST00000513464 TOM1O60784 492 aa26.47■■□□□ 1.83
SLC41A3-217ENST00000513464 ZFYVE9O95405 1425 aa26.47■■□□□ 1.83
SLC41A3-217ENST00000513464 HDGFP51858 240 aaKnown RBP26.44■■□□□ 1.82
SLC41A3-217ENST00000513464 HFM1A2PYH4 1435 aa26.43■■□□□ 1.82
SLC41A3-217ENST00000513464 RIMS2Q9UQ26 1411 aa26.43■■□□□ 1.82
SLC41A3-217ENST00000513464 SPHKAPQ2M3C7 1700 aa26.42■■□□□ 1.82
SLC41A3-217ENST00000513464 SLC26A8Q96RN1 970 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms