RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 HFM1A2PYH4 1435 aa31.61■■■□□ 2.65
NEIL3-202ENST00000513321 RNF17Q9BXT8 1623 aaKnown RBP31.59■■■□□ 2.65
NEIL3-202ENST00000513321 WASHC2CQ9Y4E1 1318 aa31.59■■■□□ 2.65
NEIL3-202ENST00000513321 FER1L4A9Z1Z3 1794 aa31.58■■■□□ 2.65
NEIL3-202ENST00000513321 RIMS1Q86UR5 1692 aaKnown RBP31.55■■■□□ 2.64
NEIL3-202ENST00000513321 CNTLNQ9NXG0 1405 aa31.55■■■□□ 2.64
NEIL3-202ENST00000513321 PTPRMP28827 1452 aa31.55■■■□□ 2.64
NEIL3-202ENST00000513321 MROH1Q8NDA8 1641 aa31.53■■■□□ 2.64
NEIL3-202ENST00000513321 TRIM26Q12899 539 aaPredicted RBP31.53■■■□□ 2.64
NEIL3-202ENST00000513321 PLPPR3Q6T4P5 718 aa31.53■■■□□ 2.64
NEIL3-202ENST00000513321 KANK1Q14678 1352 aa31.51■■■□□ 2.64
NEIL3-202ENST00000513321 CEBPAP49715 358 aaPredicted RBP31.51■■■□□ 2.63
NEIL3-202ENST00000513321 GCC2Q8IWJ2 1684 aa31.51■■■□□ 2.63
NEIL3-202ENST00000513321 DEPDC5O75140 1603 aa31.5■■■□□ 2.63
NEIL3-202ENST00000513321 ZMYM3Q14202 1370 aa31.5■■■□□ 2.63
NEIL3-202ENST00000513321 PRDM15P57071 1507 aaPredicted RBP31.49■■■□□ 2.63
NEIL3-202ENST00000513321 KDM5DQ9BY66 1539 aa31.48■■■□□ 2.63
NEIL3-202ENST00000513321 CLTCQ00610 1675 aaKnown RBP31.48■■■□□ 2.63
NEIL3-202ENST00000513321 AEBP2Q6ZN18 517 aaPredicted RBP31.47■■■□□ 2.63
NEIL3-202ENST00000513321 FAM135AQ9P2D6 1515 aa31.47■■■□□ 2.63
NEIL3-202ENST00000513321 SETD5Q9C0A6 1442 aa31.46■■■□□ 2.63
NEIL3-202ENST00000513321 ABCC3O15438 1527 aa31.46■■■□□ 2.63
NEIL3-202ENST00000513321 NUP155O75694 1391 aa31.44■■■□□ 2.62
NEIL3-202ENST00000513321 UNC13BO14795 1591 aa31.42■■■□□ 2.62
NEIL3-202ENST00000513321 VWDEQ8N2E2 1590 aa31.41■■■□□ 2.62
NEIL3-202ENST00000513321 MROH2AA6NES4 1674 aa31.41■■■□□ 2.62
NEIL3-202ENST00000513321 TRIM52Q96A61 297 aa31.39■■■□□ 2.62
NEIL3-202ENST00000513321 ZC3H13Q5T200 1668 aaKnown RBP31.38■■■□□ 2.61
NEIL3-202ENST00000513321 C3P01024 1663 aa31.37■■■□□ 2.61
NEIL3-202ENST00000513321 CEP152O94986 1710 aa31.37■■■□□ 2.61
NEIL3-202ENST00000513321 RAB3GAP2Q9H2M9 1393 aa31.35■■■□□ 2.61
NEIL3-202ENST00000513321 LMTK2Q8IWU2 1503 aa31.35■■■□□ 2.61
NEIL3-202ENST00000513321 FBXO31Q5XUX0 539 aaPredicted RBP31.34■■■□□ 2.61
NEIL3-202ENST00000513321 PZPP20742 1482 aa31.31■■■□□ 2.6
NEIL3-202ENST00000513321 CAMSAP1Q5T5Y3 1602 aa31.31■■■□□ 2.6
NEIL3-202ENST00000513321 ARHGAP31Q2M1Z3 1444 aa31.3■■■□□ 2.6
NEIL3-202ENST00000513321 IQGAP3Q86VI3 1631 aa31.3■■■□□ 2.6
NEIL3-202ENST00000513321 ACIN1Q9UKV3 1341 aaKnown RBP31.29■■■□□ 2.6
NEIL3-202ENST00000513321 NPATQ14207 1427 aa31.28■■■□□ 2.6
NEIL3-202ENST00000513321 HRCP23327 699 aa31.27■■■□□ 2.6
NEIL3-202ENST00000513321 EFCAB6Q5THR3 1501 aa31.25■■■□□ 2.59
NEIL3-202ENST00000513321 SLC4A1APQ9BWU0 796 aaKnown RBP31.24■■■□□ 2.59
NEIL3-202ENST00000513321 TET3O43151 1660 aa31.23■■■□□ 2.59
NEIL3-202ENST00000513321 TNRQ92752 1358 aa31.2■■■□□ 2.59
NEIL3-202ENST00000513321 ERVK-7P63135 1459 aa31.19■■■□□ 2.58
NEIL3-202ENST00000513321 MPHOSPH9Q99550 1183 aa31.19■■■□□ 2.58
NEIL3-202ENST00000513321 SETD1BQ9UPS6 1966 aaKnown RBP31.18■■■□□ 2.58
NEIL3-202ENST00000513321 RPRD2Q5VT52 1461 aaKnown RBP31.18■■■□□ 2.58
NEIL3-202ENST00000513321 PKD2Q13563 968 aa31.18■■■□□ 2.58
NEIL3-202ENST00000513321 CFAP65Q6ZU64 1925 aaKnown RBP31.17■■■□□ 2.58
NEIL3-202ENST00000513321 PCGF6Q9BYE7 350 aa31.16■■■□□ 2.58
NEIL3-202ENST00000513321 SPATA31D1Q6ZQQ2 1576 aa31.15■■■□□ 2.58
NEIL3-202ENST00000513321 E9PCH4 1651 aa31.14■■■□□ 2.58
NEIL3-202ENST00000513321 UHRF1BP1Q6BDS2 1440 aa31.13■■■□□ 2.57
NEIL3-202ENST00000513321 PREX1Q8TCU6 1659 aa31.13■■■□□ 2.57
NEIL3-202ENST00000513321 NOS1P29475 1434 aa31.12■■■□□ 2.57
NEIL3-202ENST00000513321 FOXD1Q16676 465 aa31.08■■■□□ 2.57
NEIL3-202ENST00000513321 LMTK3Q96Q04 1460 aa31.07■■■□□ 2.56
NEIL3-202ENST00000513321 NLRP1Q9C000 1473 aa31.05■■■□□ 2.56
NEIL3-202ENST00000513321 IDI1Q13907 227 aa31.04■■■□□ 2.56
NEIL3-202ENST00000513321 SLC52A1Q9NWF4 448 aa31.04■■■□□ 2.56
NEIL3-202ENST00000513321 MYO3AQ8NEV4 1616 aa31.04■■■□□ 2.56
NEIL3-202ENST00000513321 SYNMO15061 1565 aa31.03■■■□□ 2.56
NEIL3-202ENST00000513321 PTPRTO14522 1441 aa31.02■■■□□ 2.56
NEIL3-202ENST00000513321 A2ML1A8K2U0 1454 aa31.02■■■□□ 2.56
NEIL3-202ENST00000513321 HSPA2P54652 639 aa31.02■■■□□ 2.56
NEIL3-202ENST00000513321 CEP170BQ9Y4F5 1589 aaPredicted RBP30.99■■■□□ 2.55
NEIL3-202ENST00000513321 PLA2R1Q13018 1463 aa30.97■■■□□ 2.55
NEIL3-202ENST00000513321 THEMISQ8N1K5 641 aaPredicted RBP30.94■■■□□ 2.54
NEIL3-202ENST00000513321 STAG3Q9UJ98 1225 aa30.94■■■□□ 2.54
NEIL3-202ENST00000513321 SPHKAPQ2M3C7 1700 aa30.94■■■□□ 2.54
NEIL3-202ENST00000513321 UGGT1Q9NYU2 1555 aa30.94■■■□□ 2.54
NEIL3-202ENST00000513321 ZNF142P52746 1687 aaPredicted RBP30.94■■■□□ 2.54
NEIL3-202ENST00000513321 TRPM2O94759 1503 aa30.9■■■□□ 2.54
NEIL3-202ENST00000513321 PIK3C2BO00750 1634 aa30.9■■■□□ 2.54
NEIL3-202ENST00000513321 CHGAP10645 457 aaKnown RBP30.89■■■□□ 2.54
NEIL3-202ENST00000513321 ANKRD30BQ9BXX2 1392 aa30.84■■■□□ 2.53
NEIL3-202ENST00000513321 UBR1Q8IWV7 1749 aa30.84■■■□□ 2.53
NEIL3-202ENST00000513321 CLTCL1P53675 1640 aa30.83■■■□□ 2.53
NEIL3-202ENST00000513321 CCDC144AA2RUR9 1427 aa30.82■■■□□ 2.52
NEIL3-202ENST00000513321 ADGRB3O60242 1522 aa30.82■■■□□ 2.52
NEIL3-202ENST00000513321 DHX57Q6P158 1386 aaKnown RBP30.81■■■□□ 2.52
NEIL3-202ENST00000513321 TMEM131LA2VDJ0 1609 aa30.79■■■□□ 2.52
NEIL3-202ENST00000513321 ANKLE2Q86XL3 938 aa30.78■■■□□ 2.52
NEIL3-202ENST00000513321 KDM5AP29375 1690 aaKnown RBP30.78■■■□□ 2.52
NEIL3-202ENST00000513321 NCKAP5LQ9HCH0 1330 aa30.78■■■□□ 2.52
NEIL3-202ENST00000513321 TMEM2Q9UHN6 1383 aa30.77■■■□□ 2.52
NEIL3-202ENST00000513321 TXNDC2Q86VQ3 553 aa30.74■■■□□ 2.51
NEIL3-202ENST00000513321 ZNF326Q5BKZ1 582 aaKnown RBP30.73■■■□□ 2.51
NEIL3-202ENST00000513321 ARHGAP23Q9P227 1491 aa30.73■■■□□ 2.51
NEIL3-202ENST00000513321 SLIT1O75093 1534 aa30.73■■■□□ 2.51
NEIL3-202ENST00000513321 LTKP29376 864 aa30.73■■■□□ 2.51
NEIL3-202ENST00000513321 EID1Q9Y6B2 187 aa30.73■■■□□ 2.51
NEIL3-202ENST00000513321 MYO5BQ9ULV0 1848 aa30.7■■■□□ 2.51
NEIL3-202ENST00000513321 STRCQ7RTU9 1775 aa30.69■■■□□ 2.5
NEIL3-202ENST00000513321 HDGFP51858 240 aaKnown RBP30.69■■■□□ 2.5
NEIL3-202ENST00000513321 KIF1BO60333 1816 aa30.69■■■□□ 2.5
NEIL3-202ENST00000513321 RGL3Q3MIN7 710 aa30.68■■■□□ 2.5
NEIL3-202ENST00000513321 RIMS2Q9UQ26 1411 aa30.68■■■□□ 2.5
NEIL3-202ENST00000513321 DMRT2Q9Y5R5 561 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms