RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 RNF17Q9BXT8 1623 aaKnown RBP24.82■■□□□ 1.56
HMGCL-209ENST00000513148 GCC2Q8IWJ2 1684 aa24.8■■□□□ 1.56
HMGCL-209ENST00000513148 ESF1Q9H501 851 aaKnown RBP24.79■■□□□ 1.56
HMGCL-209ENST00000513148 CLTCQ00610 1675 aaKnown RBP24.79■■□□□ 1.56
HMGCL-209ENST00000513148 PLPPR3Q6T4P5 718 aa24.78■■□□□ 1.56
HMGCL-209ENST00000513148 MROH1Q8NDA8 1641 aa24.78■■□□□ 1.56
HMGCL-209ENST00000513148 NAIPQ13075 1403 aa24.77■■□□□ 1.56
HMGCL-209ENST00000513148 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.76■■□□□ 1.55
HMGCL-209ENST00000513148 DEPDC5O75140 1603 aa24.76■■□□□ 1.55
HMGCL-209ENST00000513148 HFM1A2PYH4 1435 aa24.75■■□□□ 1.55
HMGCL-209ENST00000513148 PTPRMP28827 1452 aa24.75■■□□□ 1.55
HMGCL-209ENST00000513148 PRDM15P57071 1507 aaPredicted RBP24.74■■□□□ 1.55
HMGCL-209ENST00000513148 KDM5DQ9BY66 1539 aa24.73■■□□□ 1.55
HMGCL-209ENST00000513148 CEP152O94986 1710 aa24.73■■□□□ 1.55
HMGCL-209ENST00000513148 WASHC2CQ9Y4E1 1318 aa24.71■■□□□ 1.55
HMGCL-209ENST00000513148 CNTLNQ9NXG0 1405 aa24.7■■□□□ 1.55
HMGCL-209ENST00000513148 C3P01024 1663 aa24.7■■□□□ 1.54
HMGCL-209ENST00000513148 MROH2AA6NES4 1674 aa24.69■■□□□ 1.54
HMGCL-209ENST00000513148 PPP6R1Q9UPN7 881 aa24.69■■□□□ 1.54
HMGCL-209ENST00000513148 ZC3H13Q5T200 1668 aaKnown RBP24.69■■□□□ 1.54
HMGCL-209ENST00000513148 UNC13BO14795 1591 aa24.68■■□□□ 1.54
HMGCL-209ENST00000513148 ABCC3O15438 1527 aa24.68■■□□□ 1.54
HMGCL-209ENST00000513148 CEBPAP49715 358 aaPredicted RBP24.68■■□□□ 1.54
HMGCL-209ENST00000513148 AEBP2Q6ZN18 517 aaPredicted RBP24.68■■□□□ 1.54
HMGCL-209ENST00000513148 FAM135AQ9P2D6 1515 aa24.67■■□□□ 1.54
HMGCL-209ENST00000513148 KANK1Q14678 1352 aa24.67■■□□□ 1.54
HMGCL-209ENST00000513148 ZMYM3Q14202 1370 aa24.65■■□□□ 1.54
HMGCL-209ENST00000513148 CAMSAP1Q5T5Y3 1602 aa24.64■■□□□ 1.53
HMGCL-209ENST00000513148 VWDEQ8N2E2 1590 aa24.63■■□□□ 1.53
HMGCL-209ENST00000513148 TRIM26Q12899 539 aaPredicted RBP24.61■■□□□ 1.53
HMGCL-209ENST00000513148 SETD5Q9C0A6 1442 aa24.6■■□□□ 1.53
HMGCL-209ENST00000513148 NUP155O75694 1391 aa24.6■■□□□ 1.53
HMGCL-209ENST00000513148 IQGAP3Q86VI3 1631 aa24.59■■□□□ 1.53
HMGCL-209ENST00000513148 TRIM52Q96A61 297 aa24.57■■□□□ 1.52
HMGCL-209ENST00000513148 LMTK2Q8IWU2 1503 aa24.56■■□□□ 1.52
HMGCL-209ENST00000513148 CFAP65Q6ZU64 1925 aaKnown RBP24.56■■□□□ 1.52
HMGCL-209ENST00000513148 PZPP20742 1482 aa24.55■■□□□ 1.52
HMGCL-209ENST00000513148 RAB3GAP2Q9H2M9 1393 aa24.55■■□□□ 1.52
HMGCL-209ENST00000513148 TET3O43151 1660 aa24.54■■□□□ 1.52
HMGCL-209ENST00000513148 EFCAB6Q5THR3 1501 aa24.54■■□□□ 1.52
HMGCL-209ENST00000513148 FBXO31Q5XUX0 539 aaPredicted RBP24.53■■□□□ 1.52
HMGCL-209ENST00000513148 NPATQ14207 1427 aa24.51■■□□□ 1.51
HMGCL-209ENST00000513148 PCGF6Q9BYE7 350 aa24.5■■□□□ 1.51
HMGCL-209ENST00000513148 PREX1Q8TCU6 1659 aa24.49■■□□□ 1.51
HMGCL-209ENST00000513148 E9PCH4 1651 aa24.49■■□□□ 1.51
HMGCL-209ENST00000513148 ARHGAP31Q2M1Z3 1444 aa24.48■■□□□ 1.51
HMGCL-209ENST00000513148 ERVK-7P63135 1459 aa24.47■■□□□ 1.51
HMGCL-209ENST00000513148 SPATA31D1Q6ZQQ2 1576 aa24.45■■□□□ 1.5
HMGCL-209ENST00000513148 MYO3AQ8NEV4 1616 aa24.45■■□□□ 1.5
HMGCL-209ENST00000513148 SETD1BQ9UPS6 1966 aaKnown RBP24.44■■□□□ 1.5
HMGCL-209ENST00000513148 TNRQ92752 1358 aa24.44■■□□□ 1.5
HMGCL-209ENST00000513148 SLC4A1APQ9BWU0 796 aaKnown RBP24.42■■□□□ 1.5
HMGCL-209ENST00000513148 UHRF1BP1Q6BDS2 1440 aa24.42■■□□□ 1.5
HMGCL-209ENST00000513148 RPRD2Q5VT52 1461 aaKnown RBP24.42■■□□□ 1.5
HMGCL-209ENST00000513148 MYT1Q01538 1121 aa24.42■■□□□ 1.5
HMGCL-209ENST00000513148 LMTK3Q96Q04 1460 aa24.39■■□□□ 1.5
HMGCL-209ENST00000513148 SYNMO15061 1565 aa24.38■■□□□ 1.49
HMGCL-209ENST00000513148 PKD2Q13563 968 aa24.38■■□□□ 1.49
HMGCL-209ENST00000513148 MPHOSPH9Q99550 1183 aa24.36■■□□□ 1.49
HMGCL-209ENST00000513148 NOS1P29475 1434 aa24.36■■□□□ 1.49
HMGCL-209ENST00000513148 CEP170BQ9Y4F5 1589 aaPredicted RBP24.36■■□□□ 1.49
HMGCL-209ENST00000513148 ZNF142P52746 1687 aaPredicted RBP24.36■■□□□ 1.49
HMGCL-209ENST00000513148 SPHKAPQ2M3C7 1700 aa24.35■■□□□ 1.49
HMGCL-209ENST00000513148 ACIN1Q9UKV3 1341 aaKnown RBP24.35■■□□□ 1.49
HMGCL-209ENST00000513148 FOXD1Q16676 465 aa24.35■■□□□ 1.49
HMGCL-209ENST00000513148 HSPA2P54652 639 aa24.33■■□□□ 1.49
HMGCL-209ENST00000513148 UGGT1Q9NYU2 1555 aa24.32■■□□□ 1.48
HMGCL-209ENST00000513148 NLRP1Q9C000 1473 aa24.32■■□□□ 1.48
HMGCL-209ENST00000513148 A2ML1A8K2U0 1454 aa24.31■■□□□ 1.48
HMGCL-209ENST00000513148 PIK3C2BO00750 1634 aa24.3■■□□□ 1.48
HMGCL-209ENST00000513148 IDI1Q13907 227 aa24.27■■□□□ 1.48
HMGCL-209ENST00000513148 PTPRTO14522 1441 aa24.26■■□□□ 1.47
HMGCL-209ENST00000513148 TRPM2O94759 1503 aa24.26■■□□□ 1.47
HMGCL-209ENST00000513148 UBR1Q8IWV7 1749 aa24.26■■□□□ 1.47
HMGCL-209ENST00000513148 PLA2R1Q13018 1463 aa24.24■■□□□ 1.47
HMGCL-209ENST00000513148 SLC52A1Q9NWF4 448 aa24.24■■□□□ 1.47
HMGCL-209ENST00000513148 STAG3Q9UJ98 1225 aa24.23■■□□□ 1.47
HMGCL-209ENST00000513148 CLTCL1P53675 1640 aa24.23■■□□□ 1.47
HMGCL-209ENST00000513148 MYO5BQ9ULV0 1848 aa24.22■■□□□ 1.47
HMGCL-209ENST00000513148 ADGRB3O60242 1522 aa24.21■■□□□ 1.47
HMGCL-209ENST00000513148 CHGAP10645 457 aaKnown RBP24.21■■□□□ 1.47
HMGCL-209ENST00000513148 THEMISQ8N1K5 641 aaPredicted RBP24.18■■□□□ 1.46
HMGCL-209ENST00000513148 TMEM131LA2VDJ0 1609 aa24.18■■□□□ 1.46
HMGCL-209ENST00000513148 KDM5AP29375 1690 aaKnown RBP24.17■■□□□ 1.46
HMGCL-209ENST00000513148 ZEB1P37275 1124 aaPredicted RBP24.16■■□□□ 1.46
HMGCL-209ENST00000513148 KIF1BO60333 1816 aa24.15■■□□□ 1.46
HMGCL-209ENST00000513148 CCDC144AA2RUR9 1427 aa24.15■■□□□ 1.46
HMGCL-209ENST00000513148 STRCQ7RTU9 1775 aa24.15■■□□□ 1.46
HMGCL-209ENST00000513148 POLR1AO95602 1720 aaPredicted RBP24.12■■□□□ 1.45
HMGCL-209ENST00000513148 NCKAP5LQ9HCH0 1330 aa24.11■■□□□ 1.45
HMGCL-209ENST00000513148 DHX57Q6P158 1386 aaKnown RBP24.11■■□□□ 1.45
HMGCL-209ENST00000513148 ANKRD30BQ9BXX2 1392 aa24.11■■□□□ 1.45
HMGCL-209ENST00000513148 TMEM2Q9UHN6 1383 aa24.09■■□□□ 1.45
HMGCL-209ENST00000513148 SLIT1O75093 1534 aa24.09■■□□□ 1.45
HMGCL-209ENST00000513148 ARHGAP23Q9P227 1491 aa24.07■■□□□ 1.44
HMGCL-209ENST00000513148 ZNF326Q5BKZ1 582 aaKnown RBP24.07■■□□□ 1.44
HMGCL-209ENST00000513148 ANKLE2Q86XL3 938 aa24.06■■□□□ 1.44
HMGCL-209ENST00000513148 NEURL4Q96JN8 1562 aa24.05■■□□□ 1.44
HMGCL-209ENST00000513148 SCAF11Q99590 1463 aaKnown RBP24.04■■□□□ 1.44
HMGCL-209ENST00000513148 NUTM2DQ5VT03 806 aaPredicted RBP24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms