RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 EIF2AK4Q9P2K8 1649 aaKnown RBP26.38■■□□□ 1.81
DDR1-270ENST00000513043 CEBPAP49715 358 aaPredicted RBP26.35■■□□□ 1.81
DDR1-270ENST00000513043 ANKRD50Q9ULJ7 1429 aa26.34■■□□□ 1.81
DDR1-270ENST00000513043 RNF17Q9BXT8 1623 aaKnown RBP26.33■■□□□ 1.81
DDR1-270ENST00000513043 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.33■■□□□ 1.81
DDR1-270ENST00000513043 CLTCQ00610 1675 aaKnown RBP26.32■■□□□ 1.8
DDR1-270ENST00000513043 CNTLNQ9NXG0 1405 aa26.31■■□□□ 1.8
DDR1-270ENST00000513043 PPP6R1Q9UPN7 881 aa26.3■■□□□ 1.8
DDR1-270ENST00000513043 WASHC2CQ9Y4E1 1318 aa26.3■■□□□ 1.8
DDR1-270ENST00000513043 MROH1Q8NDA8 1641 aa26.29■■□□□ 1.8
DDR1-270ENST00000513043 KDM5DQ9BY66 1539 aa26.27■■□□□ 1.8
DDR1-270ENST00000513043 ZMYM3Q14202 1370 aa26.26■■□□□ 1.79
DDR1-270ENST00000513043 C3P01024 1663 aa26.25■■□□□ 1.79
DDR1-270ENST00000513043 PRDM15P57071 1507 aaPredicted RBP26.24■■□□□ 1.79
DDR1-270ENST00000513043 NAIPQ13075 1403 aa26.23■■□□□ 1.79
DDR1-270ENST00000513043 MROH2AA6NES4 1674 aa26.23■■□□□ 1.79
DDR1-270ENST00000513043 DEPDC5O75140 1603 aa26.23■■□□□ 1.79
DDR1-270ENST00000513043 ABCC3O15438 1527 aa26.23■■□□□ 1.79
DDR1-270ENST00000513043 KANK1Q14678 1352 aa26.21■■□□□ 1.79
DDR1-270ENST00000513043 FAM135AQ9P2D6 1515 aa26.21■■□□□ 1.79
DDR1-270ENST00000513043 CEP152O94986 1710 aa26.2■■□□□ 1.79
DDR1-270ENST00000513043 HFM1A2PYH4 1435 aa26.2■■□□□ 1.78
DDR1-270ENST00000513043 GCC2Q8IWJ2 1684 aa26.19■■□□□ 1.78
DDR1-270ENST00000513043 ZC3H13Q5T200 1668 aaKnown RBP26.18■■□□□ 1.78
DDR1-270ENST00000513043 UNC13BO14795 1591 aa26.15■■□□□ 1.78
DDR1-270ENST00000513043 FBXO31Q5XUX0 539 aaPredicted RBP26.14■■□□□ 1.78
DDR1-270ENST00000513043 CAMSAP1Q5T5Y3 1602 aa26.14■■□□□ 1.77
DDR1-270ENST00000513043 VWDEQ8N2E2 1590 aa26.13■■□□□ 1.77
DDR1-270ENST00000513043 PZPP20742 1482 aa26.12■■□□□ 1.77
DDR1-270ENST00000513043 NUP155O75694 1391 aa26.11■■□□□ 1.77
DDR1-270ENST00000513043 NPATQ14207 1427 aa26.09■■□□□ 1.77
DDR1-270ENST00000513043 LMTK3Q96Q04 1460 aa26.08■■□□□ 1.77
DDR1-270ENST00000513043 LMTK2Q8IWU2 1503 aa26.08■■□□□ 1.77
DDR1-270ENST00000513043 TRIM52Q96A61 297 aa26.06■■□□□ 1.76
DDR1-270ENST00000513043 SETD5Q9C0A6 1442 aa26.05■■□□□ 1.76
DDR1-270ENST00000513043 IQGAP3Q86VI3 1631 aa26.04■■□□□ 1.76
DDR1-270ENST00000513043 PREX1Q8TCU6 1659 aa26.04■■□□□ 1.76
DDR1-270ENST00000513043 TNRQ92752 1358 aa26.04■■□□□ 1.76
DDR1-270ENST00000513043 UHRF1BP1Q6BDS2 1440 aa26.04■■□□□ 1.76
DDR1-270ENST00000513043 EFCAB6Q5THR3 1501 aa26.04■■□□□ 1.76
DDR1-270ENST00000513043 CFAP65Q6ZU64 1925 aaKnown RBP26.03■■□□□ 1.76
DDR1-270ENST00000513043 ARHGAP31Q2M1Z3 1444 aa26.03■■□□□ 1.76
DDR1-270ENST00000513043 ERVK-7P63135 1459 aa26.02■■□□□ 1.76
DDR1-270ENST00000513043 TET3O43151 1660 aa26.01■■□□□ 1.75
DDR1-270ENST00000513043 HSPA2P54652 639 aa26.01■■□□□ 1.75
DDR1-270ENST00000513043 SETD1BQ9UPS6 1966 aaKnown RBP26.01■■□□□ 1.75
DDR1-270ENST00000513043 MYO3AQ8NEV4 1616 aa25.99■■□□□ 1.75
DDR1-270ENST00000513043 RAB3GAP2Q9H2M9 1393 aa25.98■■□□□ 1.75
DDR1-270ENST00000513043 SPATA31D1Q6ZQQ2 1576 aa25.98■■□□□ 1.75
DDR1-270ENST00000513043 E9PCH4 1651 aa25.94■■□□□ 1.74
DDR1-270ENST00000513043 TRIM26Q12899 539 aaPredicted RBP25.93■■□□□ 1.74
DDR1-270ENST00000513043 RPRD2Q5VT52 1461 aaKnown RBP25.92■■□□□ 1.74
DDR1-270ENST00000513043 CEP170BQ9Y4F5 1589 aaPredicted RBP25.92■■□□□ 1.74
DDR1-270ENST00000513043 SLC4A1APQ9BWU0 796 aaKnown RBP25.91■■□□□ 1.74
DDR1-270ENST00000513043 ILDR1Q86SU0 546 aaPredicted RBP25.9■■□□□ 1.74
DDR1-270ENST00000513043 A2ML1A8K2U0 1454 aa25.9■■□□□ 1.74
DDR1-270ENST00000513043 NOS1P29475 1434 aa25.89■■□□□ 1.74
DDR1-270ENST00000513043 NLRP1Q9C000 1473 aa25.89■■□□□ 1.73
DDR1-270ENST00000513043 ZNF142P52746 1687 aaPredicted RBP25.88■■□□□ 1.73
DDR1-270ENST00000513043 SYNMO15061 1565 aa25.88■■□□□ 1.73
DDR1-270ENST00000513043 PKD2Q13563 968 aa25.88■■□□□ 1.73
DDR1-270ENST00000513043 IDI1Q13907 227 aa25.83■■□□□ 1.73
DDR1-270ENST00000513043 FOXD1Q16676 465 aa25.83■■□□□ 1.73
DDR1-270ENST00000513043 MPHOSPH9Q99550 1183 aa25.83■■□□□ 1.73
DDR1-270ENST00000513043 UGGT1Q9NYU2 1555 aa25.82■■□□□ 1.72
DDR1-270ENST00000513043 ACIN1Q9UKV3 1341 aaKnown RBP25.8■■□□□ 1.72
DDR1-270ENST00000513043 PIK3C2BO00750 1634 aa25.8■■□□□ 1.72
DDR1-270ENST00000513043 SLC52A1Q9NWF4 448 aa25.79■■□□□ 1.72
DDR1-270ENST00000513043 STAG3Q9UJ98 1225 aa25.79■■□□□ 1.72
DDR1-270ENST00000513043 SPHKAPQ2M3C7 1700 aa25.77■■□□□ 1.72
DDR1-270ENST00000513043 HRCP23327 699 aa25.77■■□□□ 1.72
DDR1-270ENST00000513043 THEMISQ8N1K5 641 aaPredicted RBP25.77■■□□□ 1.72
DDR1-270ENST00000513043 PTPRTO14522 1441 aa25.76■■□□□ 1.71
DDR1-270ENST00000513043 UBR1Q8IWV7 1749 aa25.75■■□□□ 1.71
DDR1-270ENST00000513043 CHGAP10645 457 aaKnown RBP25.75■■□□□ 1.71
DDR1-270ENST00000513043 NCKAP5LQ9HCH0 1330 aa25.74■■□□□ 1.71
DDR1-270ENST00000513043 PLA2R1Q13018 1463 aa25.72■■□□□ 1.71
DDR1-270ENST00000513043 STRCQ7RTU9 1775 aa25.72■■□□□ 1.71
DDR1-270ENST00000513043 ADGRB3O60242 1522 aa25.72■■□□□ 1.71
DDR1-270ENST00000513043 TRPM2O94759 1503 aa25.71■■□□□ 1.71
DDR1-270ENST00000513043 CLTCL1P53675 1640 aa25.68■■□□□ 1.7
DDR1-270ENST00000513043 ANKLE2Q86XL3 938 aa25.67■■□□□ 1.7
DDR1-270ENST00000513043 PCGF6Q9BYE7 350 aa25.66■■□□□ 1.7
DDR1-270ENST00000513043 TMEM131LA2VDJ0 1609 aa25.65■■□□□ 1.7
DDR1-270ENST00000513043 MYO5BQ9ULV0 1848 aa25.65■■□□□ 1.7
DDR1-270ENST00000513043 KDM5AP29375 1690 aaKnown RBP25.64■■□□□ 1.7
DDR1-270ENST00000513043 TMEM2Q9UHN6 1383 aa25.64■■□□□ 1.69
DDR1-270ENST00000513043 ARHGAP23Q9P227 1491 aa25.62■■□□□ 1.69
DDR1-270ENST00000513043 LTKP29376 864 aa25.62■■□□□ 1.69
DDR1-270ENST00000513043 TXNDC2Q86VQ3 553 aa25.62■■□□□ 1.69
DDR1-270ENST00000513043 SLIT1O75093 1534 aa25.62■■□□□ 1.69
DDR1-270ENST00000513043 POLR1AO95602 1720 aaPredicted RBP25.61■■□□□ 1.69
DDR1-270ENST00000513043 FBXO41Q8TF61 875 aa25.61■■□□□ 1.69
DDR1-270ENST00000513043 DMRT2Q9Y5R5 561 aa25.61■■□□□ 1.69
DDR1-270ENST00000513043 EID1Q9Y6B2 187 aa25.6■■□□□ 1.69
DDR1-270ENST00000513043 CCDC144AA2RUR9 1427 aa25.6■■□□□ 1.69
DDR1-270ENST00000513043 NEURL4Q96JN8 1562 aa25.6■■□□□ 1.69
DDR1-270ENST00000513043 SCAF11Q99590 1463 aaKnown RBP25.6■■□□□ 1.69
DDR1-270ENST00000513043 ZNF326Q5BKZ1 582 aaKnown RBP25.59■■□□□ 1.69
DDR1-270ENST00000513043 SENP3Q9H4L4 574 aaPredicted RBP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms