RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 ITSN2Q9NZM3 1697 aa14.2□□□□□ -0.14
MSH3-203ENST00000512531 CCER1Q8TC90 406 aaPredicted RBP14.19□□□□□ -0.14
MSH3-203ENST00000512531 FYCO1Q9BQS8 1478 aa14.18□□□□□ -0.14
MSH3-203ENST00000512531 NPATQ14207 1427 aa14.18□□□□□ -0.14
MSH3-203ENST00000512531 C3P01024 1663 aa14.18□□□□□ -0.14
MSH3-203ENST00000512531 KIDINS220Q9ULH0 1771 aa14.18□□□□□ -0.14
MSH3-203ENST00000512531 IQSEC2Q5JU85 1478 aa14.18□□□□□ -0.14
MSH3-203ENST00000512531 KIAA1107Q9UPP5 1409 aa14.16□□□□□ -0.14
MSH3-203ENST00000512531 CDC42BPAQ5VT25 1732 aa14.15□□□□□ -0.14
MSH3-203ENST00000512531 MROH2AA6NES4 1674 aa14.15□□□□□ -0.14
MSH3-203ENST00000512531 PLEKHH2Q8IVE3 1493 aa14.15□□□□□ -0.14
MSH3-203ENST00000512531 PRKCSHP14314 528 aaPredicted RBP14.15□□□□□ -0.14
MSH3-203ENST00000512531 NCOA1Q15788 1441 aa14.15□□□□□ -0.14
MSH3-203ENST00000512531 SAMD9LQ8IVG5 1584 aa14.14□□□□□ -0.15
MSH3-203ENST00000512531 GPATCH8Q9UKJ3 1502 aaKnown RBP14.14□□□□□ -0.15
MSH3-203ENST00000512531 SPAG9O60271 1321 aaKnown RBP14.13□□□□□ -0.15
MSH3-203ENST00000512531 LTBP4Q8N2S1 1624 aa14.12□□□□□ -0.15
MSH3-203ENST00000512531 ZMYM3Q14202 1370 aa14.11□□□□□ -0.15
MSH3-203ENST00000512531 MAP3K1Q13233 1512 aa14.11□□□□□ -0.15
MSH3-203ENST00000512531 KDM2AQ9Y2K7 1162 aa14.11□□□□□ -0.15
MSH3-203ENST00000512531 SYCP2Q9BX26 1530 aa14.1□□□□□ -0.15
MSH3-203ENST00000512531 ATP7AQ04656 1500 aa14.09□□□□□ -0.15
MSH3-203ENST00000512531 PLXNC1O60486 1568 aa14.09□□□□□ -0.15
MSH3-203ENST00000512531 PLA2R1Q13018 1463 aa14.08□□□□□ -0.16
MSH3-203ENST00000512531 VSIG10Q8N0Z9 540 aa14.08□□□□□ -0.16
MSH3-203ENST00000512531 SPOCK2Q92563 424 aa14.08□□□□□ -0.16
MSH3-203ENST00000512531 CFDP1Q9UEE9 299 aaPredicted RBP14.08□□□□□ -0.16
MSH3-203ENST00000512531 ZNF777Q9ULD5 760 aaPredicted RBP14.08□□□□□ -0.16
MSH3-203ENST00000512531 A2MP01023 1474 aa14.07□□□□□ -0.16
MSH3-203ENST00000512531 HNRNPMP52272 730 aaKnown RBP eCLIP14.07□□□□□ -0.16
MSH3-203ENST00000512531 INO80Q9ULG1 1556 aaPredicted RBP14.07□□□□□ -0.16
MSH3-203ENST00000512531 CCNB3Q8WWL7 1395 aa14.07□□□□□ -0.16
MSH3-203ENST00000512531 CAMSAP1Q5T5Y3 1602 aa14.06□□□□□ -0.16
MSH3-203ENST00000512531 DISP3Q9P2K9 1392 aa14.06□□□□□ -0.16
MSH3-203ENST00000512531 C1QBPQ07021 282 aaKnown RBP14.05□□□□□ -0.16
MSH3-203ENST00000512531 ZBTB12Q9Y330 459 aaPredicted RBP14.05□□□□□ -0.16
MSH3-203ENST00000512531 RTEL1-TNFRSF6BF6WH68 1400 aa14.05□□□□□ -0.16
MSH3-203ENST00000512531 PTPRKQ15262 1439 aa14.05□□□□□ -0.16
MSH3-203ENST00000512531 ZNF142P52746 1687 aaPredicted RBP14.04□□□□□ -0.16
MSH3-203ENST00000512531 ECM2O94769 699 aaPredicted RBP14.04□□□□□ -0.16
MSH3-203ENST00000512531 MTUS2Q5JR59 1369 aa14.04□□□□□ -0.16
MSH3-203ENST00000512531 SOCS7O14512 581 aa14.03□□□□□ -0.16
MSH3-203ENST00000512531 BCANQ96GW7 911 aa14.03□□□□□ -0.16
MSH3-203ENST00000512531 TCOF1Q13428 1488 aaKnown RBP14.03□□□□□ -0.16
MSH3-203ENST00000512531 SUPT6HQ7KZ85 1726 aaKnown RBP14.03□□□□□ -0.16
MSH3-203ENST00000512531 ADGBQ8N7X0 1667 aa14.02□□□□□ -0.16
MSH3-203ENST00000512531 KLHL34Q8N239 644 aa14.02□□□□□ -0.17
MSH3-203ENST00000512531 FAM135AQ9P2D6 1515 aa14.01□□□□□ -0.17
MSH3-203ENST00000512531 MBD5Q9P267 1494 aa14.01□□□□□ -0.17
MSH3-203ENST00000512531 RGL2O15211 777 aa14.01□□□□□ -0.17
MSH3-203ENST00000512531 BBXQ8WY36 941 aaPredicted RBP14.01□□□□□ -0.17
MSH3-203ENST00000512531 CLTCQ00610 1675 aaKnown RBP14.01□□□□□ -0.17
MSH3-203ENST00000512531 MYO3AQ8NEV4 1616 aa14.01□□□□□ -0.17
MSH3-203ENST00000512531 CEP170BQ9Y4F5 1589 aaPredicted RBP14□□□□□ -0.17
MSH3-203ENST00000512531 RSPH4AQ5TD94 716 aa14□□□□□ -0.17
MSH3-203ENST00000512531 DHX29Q7Z478 1369 aaKnown RBP13.99□□□□□ -0.17
MSH3-203ENST00000512531 NCKAP5LQ9HCH0 1330 aa13.99□□□□□ -0.17
MSH3-203ENST00000512531 GGT6Q6P531 493 aa13.99□□□□□ -0.17
MSH3-203ENST00000512531 ILDR2Q71H61 639 aa13.99□□□□□ -0.17
MSH3-203ENST00000512531 SSUH2Q9Y2M2 353 aa13.99□□□□□ -0.17
MSH3-203ENST00000512531 EHBP1L1Q8N3D4 1523 aa13.99□□□□□ -0.17
MSH3-203ENST00000512531 TIAM1Q13009 1591 aa13.98□□□□□ -0.17
MSH3-203ENST00000512531 SPATA31D1Q6ZQQ2 1576 aa13.98□□□□□ -0.17
MSH3-203ENST00000512531 TAOK2Q9UL54 1235 aa13.98□□□□□ -0.17
MSH3-203ENST00000512531 A2ML1A8K2U0 1454 aa13.98□□□□□ -0.17
MSH3-203ENST00000512531 CLSPNQ9HAW4 1339 aa13.97□□□□□ -0.17
MSH3-203ENST00000512531 ZNF692Q9BU19 519 aaPredicted RBP13.97□□□□□ -0.17
MSH3-203ENST00000512531 RRBP1Q9P2E9 1410 aaKnown RBP13.97□□□□□ -0.17
MSH3-203ENST00000512531 ZNF335Q9H4Z2 1342 aaPredicted RBP13.96□□□□□ -0.17
MSH3-203ENST00000512531 PAXIP1Q6ZW49 1069 aaPredicted RBP13.96□□□□□ -0.17
MSH3-203ENST00000512531 ZNF644Q9H582 1327 aaPredicted RBP13.94□□□□□ -0.18
MSH3-203ENST00000512531 DSG3P32926 999 aa13.94□□□□□ -0.18
MSH3-203ENST00000512531 DNMT1P26358 1616 aaKnown RBP13.93□□□□□ -0.18
MSH3-203ENST00000512531 UBAP1LF5GYI3 381 aa13.93□□□□□ -0.18
MSH3-203ENST00000512531 PZPP20742 1482 aa13.93□□□□□ -0.18
MSH3-203ENST00000512531 CCDC141Q6ZP82 1450 aa13.93□□□□□ -0.18
MSH3-203ENST00000512531 TNRQ92752 1358 aa13.92□□□□□ -0.18
MSH3-203ENST00000512531 LRRC9Q6ZRR7 1453 aa13.92□□□□□ -0.18
MSH3-203ENST00000512531 CPS1P31327 1500 aa13.91□□□□□ -0.18
MSH3-203ENST00000512531 KDM5DQ9BY66 1539 aa13.91□□□□□ -0.18
MSH3-203ENST00000512531 STAG3Q9UJ98 1225 aa13.91□□□□□ -0.18
MSH3-203ENST00000512531 KIF3BO15066 747 aa13.9□□□□□ -0.18
MSH3-203ENST00000512531 CFAP44Q96MT7 982 aa13.9□□□□□ -0.18
MSH3-203ENST00000512531 NLRP1Q9C000 1473 aa13.89□□□□□ -0.19
MSH3-203ENST00000512531 KANK4Q5T7N3 995 aaPredicted RBP13.89□□□□□ -0.19
MSH3-203ENST00000512531 THEMISQ8N1K5 641 aaPredicted RBP13.89□□□□□ -0.19
MSH3-203ENST00000512531 MIA2Q96PC5 1412 aa13.89□□□□□ -0.19
MSH3-203ENST00000512531 ARHGEF5Q12774 1597 aa13.88□□□□□ -0.19
MSH3-203ENST00000512531 NCOA2Q15596 1464 aa13.88□□□□□ -0.19
MSH3-203ENST00000512531 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.88□□□□□ -0.19
MSH3-203ENST00000512531 WASHC2CQ9Y4E1 1318 aa13.88□□□□□ -0.19
MSH3-203ENST00000512531 CAMSAP2Q08AD1 1489 aa13.87□□□□□ -0.19
MSH3-203ENST00000512531 SPDYE2BA6NHP3 402 aa13.87□□□□□ -0.19
MSH3-203ENST00000512531 TOM1O60784 492 aa13.87□□□□□ -0.19
MSH3-203ENST00000512531 SPDYE6P0CI01 402 aa13.87□□□□□ -0.19
MSH3-203ENST00000512531 TSPY4P0CV99 314 aa13.87□□□□□ -0.19
MSH3-203ENST00000512531 TSPY10P0CW01 314 aa13.87□□□□□ -0.19
MSH3-203ENST00000512531 SPDYE2Q495Y8 402 aa13.87□□□□□ -0.19
MSH3-203ENST00000512531 ANKLE2Q86XL3 938 aa13.87□□□□□ -0.19
MSH3-203ENST00000512531 NEURL4Q96JN8 1562 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms