RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 DUOX2Q9NRD8 1548 aa25.58■■□□□ 1.68
DDX41-213ENST00000512027 MROH1Q8NDA8 1641 aa25.56■■□□□ 1.68
DDX41-213ENST00000512027 PTPRKQ15262 1439 aa25.56■■□□□ 1.68
DDX41-213ENST00000512027 FAM50AQ14320 339 aaKnown RBP25.56■■□□□ 1.68
DDX41-213ENST00000512027 CHIC2Q9UKJ5 165 aa25.56■■□□□ 1.68
DDX41-213ENST00000512027 KIF15Q9NS87 1388 aa25.56■■□□□ 1.68
DDX41-213ENST00000512027 MYO3AQ8NEV4 1616 aa25.55■■□□□ 1.68
DDX41-213ENST00000512027 NPATQ14207 1427 aa25.55■■□□□ 1.68
DDX41-213ENST00000512027 RRP7BPQ9NSQ0 103 aa25.54■■□□□ 1.68
DDX41-213ENST00000512027 PPP6R1Q9UPN7 881 aa25.54■■□□□ 1.68
DDX41-213ENST00000512027 CEP152O94986 1710 aa25.53■■□□□ 1.68
DDX41-213ENST00000512027 STRCQ7RTU9 1775 aa25.53■■□□□ 1.68
DDX41-213ENST00000512027 FAM135AQ9P2D6 1515 aa25.52■■□□□ 1.68
DDX41-213ENST00000512027 WASHC2CQ9Y4E1 1318 aa25.51■■□□□ 1.67
DDX41-213ENST00000512027 ZNF142P52746 1687 aaPredicted RBP25.49■■□□□ 1.67
DDX41-213ENST00000512027 ZC3H13Q5T200 1668 aaKnown RBP25.49■■□□□ 1.67
DDX41-213ENST00000512027 ABCC3O15438 1527 aa25.49■■□□□ 1.67
DDX41-213ENST00000512027 ERBINQ96RT1 1412 aa25.47■■□□□ 1.67
DDX41-213ENST00000512027 FBXO31Q5XUX0 539 aaPredicted RBP25.47■■□□□ 1.67
DDX41-213ENST00000512027 PZPP20742 1482 aa25.47■■□□□ 1.67
DDX41-213ENST00000512027 ANKRD30AQ9BXX3 1397 aa25.46■■□□□ 1.67
DDX41-213ENST00000512027 CEP170BQ9Y4F5 1589 aaPredicted RBP25.45■■□□□ 1.66
DDX41-213ENST00000512027 ADGRL2O95490 1459 aa25.45■■□□□ 1.66
DDX41-213ENST00000512027 NCOA1Q15788 1441 aa25.45■■□□□ 1.66
DDX41-213ENST00000512027 PRDM15P57071 1507 aaPredicted RBP25.44■■□□□ 1.66
DDX41-213ENST00000512027 DEPDC5O75140 1603 aa25.44■■□□□ 1.66
DDX41-213ENST00000512027 CAMSAP1Q5T5Y3 1602 aa25.44■■□□□ 1.66
DDX41-213ENST00000512027 CFAP65Q6ZU64 1925 aaKnown RBP25.41■■□□□ 1.66
DDX41-213ENST00000512027 TNRQ92752 1358 aa25.39■■□□□ 1.65
DDX41-213ENST00000512027 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.38■■□□□ 1.651e-6■■■■□ 26.5
DDX41-213ENST00000512027 A2ML1A8K2U0 1454 aa25.36■■□□□ 1.65
DDX41-213ENST00000512027 ITGAEP38570 1179 aa25.34■■□□□ 1.65
DDX41-213ENST00000512027 SPATA31D1Q6ZQQ2 1576 aa25.34■■□□□ 1.65
DDX41-213ENST00000512027 ERVK-7P63135 1459 aa25.33■■□□□ 1.65
DDX41-213ENST00000512027 VWDEQ8N2E2 1590 aa25.31■■□□□ 1.64
DDX41-213ENST00000512027 ANKRD50Q9ULJ7 1429 aa25.3■■□□□ 1.64
DDX41-213ENST00000512027 NCKAP5LQ9HCH0 1330 aa25.3■■□□□ 1.64
DDX41-213ENST00000512027 ILDR1Q86SU0 546 aaPredicted RBP25.29■■□□□ 1.64
DDX41-213ENST00000512027 KANK1Q14678 1352 aa25.28■■□□□ 1.64
DDX41-213ENST00000512027 PLA2R1Q13018 1463 aa25.28■■□□□ 1.64
DDX41-213ENST00000512027 PTPRTO14522 1441 aa25.27■■□□□ 1.64
DDX41-213ENST00000512027 DMRT2Q9Y5R5 561 aa25.26■■□□□ 1.63
DDX41-213ENST00000512027 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.26■■□□□ 1.63
DDX41-213ENST00000512027 RRBP1Q9P2E9 1410 aaKnown RBP25.26■■□□□ 1.63
DDX41-213ENST00000512027 NLRP1Q9C000 1473 aa25.26■■□□□ 1.63
DDX41-213ENST00000512027 LMTK2Q8IWU2 1503 aa25.25■■□□□ 1.63
DDX41-213ENST00000512027 POLR1AO95602 1720 aaPredicted RBP25.25■■□□□ 1.63
DDX41-213ENST00000512027 UGGT1Q9NYU2 1555 aa25.24■■□□□ 1.63
DDX41-213ENST00000512027 ARHGAP31Q2M1Z3 1444 aa25.24■■□□□ 1.63
DDX41-213ENST00000512027 ROCK1Q13464 1354 aa25.24■■□□□ 1.63
DDX41-213ENST00000512027 UNC13BO14795 1591 aa25.23■■□□□ 1.63
DDX41-213ENST00000512027 EFCAB6Q5THR3 1501 aa25.22■■□□□ 1.63
DDX41-213ENST00000512027 NEURL4Q96JN8 1562 aa25.2■■□□□ 1.62
DDX41-213ENST00000512027 UBR1Q8IWV7 1749 aa25.2■■□□□ 1.62
DDX41-213ENST00000512027 SYNMO15061 1565 aa25.17■■□□□ 1.62
DDX41-213ENST00000512027 TET3O43151 1660 aa25.17■■□□□ 1.62
DDX41-213ENST00000512027 PIK3C2BO00750 1634 aa25.16■■□□□ 1.62
DDX41-213ENST00000512027 PKD2Q13563 968 aa25.16■■□□□ 1.62
DDX41-213ENST00000512027 CERKQ8TCT0 537 aa25.15■■□□□ 1.62
DDX41-213ENST00000512027 GCC2Q8IWJ2 1684 aa25.15■■□□□ 1.62
DDX41-213ENST00000512027 LTBP4Q8N2S1 1624 aa25.14■■□□□ 1.61
DDX41-213ENST00000512027 IQGAP3Q86VI3 1631 aa25.12■■□□□ 1.61
DDX41-213ENST00000512027 THEMISQ8N1K5 641 aaPredicted RBP25.12■■□□□ 1.61
DDX41-213ENST00000512027 FBXO41Q8TF61 875 aa25.11■■□□□ 1.61
DDX41-213ENST00000512027 E9PCH4 1651 aa25.1■■□□□ 1.61
DDX41-213ENST00000512027 ZNF335Q9H4Z2 1342 aaPredicted RBP25.1■■□□□ 1.61
DDX41-213ENST00000512027 NOS1P29475 1434 aa25.09■■□□□ 1.61
DDX41-213ENST00000512027 ANKLE2Q86XL3 938 aa25.07■■□□□ 1.6
DDX41-213ENST00000512027 IQGAP1P46940 1657 aa25.06■■□□□ 1.6
DDX41-213ENST00000512027 RPRD2Q5VT52 1461 aaKnown RBP25.05■■□□□ 1.6
DDX41-213ENST00000512027 NAIPQ13075 1403 aa25.04■■□□□ 1.6
DDX41-213ENST00000512027 NUP155O75694 1391 aa25.04■■□□□ 1.6
DDX41-213ENST00000512027 NPHP4O75161 1426 aaPredicted RBP25.03■■□□□ 1.6
DDX41-213ENST00000512027 MYO5BQ9ULV0 1848 aa25.03■■□□□ 1.6
DDX41-213ENST00000512027 IDI1Q13907 227 aa25.03■■□□□ 1.6
DDX41-213ENST00000512027 MED14O60244 1454 aa25.02■■□□□ 1.6
DDX41-213ENST00000512027 ARHGAP23Q9P227 1491 aa25.02■■□□□ 1.6
DDX41-213ENST00000512027 SLIT1O75093 1534 aa25.02■■□□□ 1.6
DDX41-213ENST00000512027 KDM5AP29375 1690 aaKnown RBP25.01■■□□□ 1.59
DDX41-213ENST00000512027 ADGRB3O60242 1522 aa25.01■■□□□ 1.59
DDX41-213ENST00000512027 SCAF11Q99590 1463 aaKnown RBP24.99■■□□□ 1.59
DDX41-213ENST00000512027 STAG3Q9UJ98 1225 aa24.99■■□□□ 1.59
DDX41-213ENST00000512027 LTKP29376 864 aa24.98■■□□□ 1.59
DDX41-213ENST00000512027 HFM1A2PYH4 1435 aa24.95■■□□□ 1.59
DDX41-213ENST00000512027 TMEM2Q9UHN6 1383 aa24.95■■□□□ 1.59
DDX41-213ENST00000512027 TXNDC2Q86VQ3 553 aa24.94■■□□□ 1.58
DDX41-213ENST00000512027 STRCP1A6NGW2 1772 aa24.94■■□□□ 1.58
DDX41-213ENST00000512027 SPHKAPQ2M3C7 1700 aa24.93■■□□□ 1.58
DDX41-213ENST00000512027 TMEM131LA2VDJ0 1609 aa24.93■■□□□ 1.58
DDX41-213ENST00000512027 SLC52A1Q9NWF4 448 aa24.92■■□□□ 1.58
DDX41-213ENST00000512027 IQSEC2Q5JU85 1478 aa24.89■■□□□ 1.58
DDX41-213ENST00000512027 EID1Q9Y6B2 187 aa24.88■■□□□ 1.57
DDX41-213ENST00000512027 CPS1P31327 1500 aa24.86■■□□□ 1.57
DDX41-213ENST00000512027 CHGAP10645 457 aaKnown RBP24.86■■□□□ 1.57
DDX41-213ENST00000512027 SENP3Q9H4L4 574 aaPredicted RBP24.86■■□□□ 1.57
DDX41-213ENST00000512027 TRIM52Q96A61 297 aa24.84■■□□□ 1.57
DDX41-213ENST00000512027 ZFYVE9O95405 1425 aa24.83■■□□□ 1.57
DDX41-213ENST00000512027 RIMS2Q9UQ26 1411 aa24.82■■□□□ 1.56
DDX41-213ENST00000512027 CLTCL1P53675 1640 aa24.81■■□□□ 1.56
DDX41-213ENST00000512027 TRPM2O94759 1503 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms