RNA–Protein interactions for RNA: ENST00000511898.1

BRD8-223, Transcript of bromodomain containing 8, human

TSL 5

Gene BRD8, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRD8-223	ENST00000511898	WASHC2C	Q9Y4E1	1318 aa		11.86	□□□□□ -0.51
BRD8-223	ENST00000511898	FAM50A	Q14320	339 aa	Known RBP	11.85	□□□□□ -0.51
BRD8-223	ENST00000511898	FBXO31	Q5XUX0	539 aa	Predicted RBP	11.85	□□□□□ -0.51
BRD8-223	ENST00000511898	NCOA1	Q15788	1441 aa		11.85	□□□□□ -0.51
BRD8-223	ENST00000511898	KIF15	Q9NS87	1388 aa		11.84	□□□□□ -0.51
BRD8-223	ENST00000511898	UHRF1BP1	Q6BDS2	1440 aa		11.84	□□□□□ -0.51
BRD8-223	ENST00000511898	MROH2A	A6NES4	1674 aa		11.84	□□□□□ -0.51
BRD8-223	ENST00000511898	DNMT1	P26358	1616 aa	Known RBP	11.83	□□□□□ -0.52
BRD8-223	ENST00000511898	ANKRD30A	Q9BXX3	1397 aa		11.82	□□□□□ -0.52
BRD8-223	ENST00000511898	DUOX2	Q9NRD8	1548 aa		11.82	□□□□□ -0.52
BRD8-223	ENST00000511898	CLTC	Q00610	1675 aa	Known RBP	11.82	□□□□□ -0.52
BRD8-223	ENST00000511898	PREX1	Q8TCU6	1659 aa		11.81	□□□□□ -0.52
BRD8-223	ENST00000511898	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.8	□□□□□ -0.52
BRD8-223	ENST00000511898	ERBIN	Q96RT1	1412 aa		11.8	□□□□□ -0.52
BRD8-223	ENST00000511898	ADGRL2	O95490	1459 aa		11.8	□□□□□ -0.52
BRD8-223	ENST00000511898	KDM5D	Q9BY66	1539 aa		11.8	□□□□□ -0.52
BRD8-223	ENST00000511898	FAM135A	Q9P2D6	1515 aa		11.8	□□□□□ -0.52
BRD8-223	ENST00000511898	MROH1	Q8NDA8	1641 aa		11.79	□□□□□ -0.52
BRD8-223	ENST00000511898	PZP	P20742	1482 aa		11.79	□□□□□ -0.52
BRD8-223	ENST00000511898	RNF17	Q9BXT8	1623 aa	Known RBP	11.78	□□□□□ -0.52
BRD8-223	ENST00000511898	CROCC2	H7BZ55	1655 aa		11.78	□□□□□ -0.52
BRD8-223	ENST00000511898	ABCC3	O15438	1527 aa		11.78	□□□□□ -0.52
BRD8-223	ENST00000511898	EIF2AK4	Q9P2K8	1649 aa	Known RBP	11.78	□□□□□ -0.52
BRD8-223	ENST00000511898	TNR	Q92752	1358 aa		11.77	□□□□□ -0.53
BRD8-223	ENST00000511898	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	11.76	□□□□□ -0.53	1e-9	■■■■□ 22.7
BRD8-223	ENST00000511898	DMRT2	Q9Y5R5	561 aa		11.76	□□□□□ -0.53
BRD8-223	ENST00000511898	ROCK1	Q13464	1354 aa		11.76	□□□□□ -0.53
BRD8-223	ENST00000511898	STRC	Q7RTU9	1775 aa		11.75	□□□□□ -0.53
BRD8-223	ENST00000511898	ARHGAP31	Q2M1Z3	1444 aa		11.75	□□□□□ -0.53
BRD8-223	ENST00000511898	RRBP1	Q9P2E9	1410 aa	Known RBP	11.75	□□□□□ -0.53
BRD8-223	ENST00000511898	ANKRD50	Q9ULJ7	1429 aa		11.75	□□□□□ -0.53
BRD8-223	ENST00000511898	NCKAP5L	Q9HCH0	1330 aa		11.74	□□□□□ -0.53
BRD8-223	ENST00000511898	A2ML1	A8K2U0	1454 aa		11.74	□□□□□ -0.53
BRD8-223	ENST00000511898	PTPRT	O14522	1441 aa		11.73	□□□□□ -0.53
BRD8-223	ENST00000511898	ITGAE	P38570	1179 aa		11.73	□□□□□ -0.53
BRD8-223	ENST00000511898	PRDM15	P57071	1507 aa	Predicted RBP	11.73	□□□□□ -0.53
BRD8-223	ENST00000511898	ILDR1	Q86SU0	546 aa	Predicted RBP	11.73	□□□□□ -0.53
BRD8-223	ENST00000511898	VWDE	Q8N2E2	1590 aa		11.72	□□□□□ -0.53
BRD8-223	ENST00000511898	DEPDC5	O75140	1603 aa		11.71	□□□□□ -0.53
BRD8-223	ENST00000511898	CAMSAP1	Q5T5Y3	1602 aa		11.71	□□□□□ -0.53
BRD8-223	ENST00000511898	MYO3A	Q8NEV4	1616 aa		11.71	□□□□□ -0.53
BRD8-223	ENST00000511898	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	11.71	□□□□□ -0.53
BRD8-223	ENST00000511898	LMTK2	Q8IWU2	1503 aa		11.71	□□□□□ -0.53
BRD8-223	ENST00000511898	ERVK-7	P63135	1459 aa		11.71	□□□□□ -0.53
BRD8-223	ENST00000511898	PLA2R1	Q13018	1463 aa		11.71	□□□□□ -0.53
BRD8-223	ENST00000511898	NLRP1	Q9C000	1473 aa		11.71	□□□□□ -0.53
BRD8-223	ENST00000511898	KANK1	Q14678	1352 aa		11.71	□□□□□ -0.53
BRD8-223	ENST00000511898	PKD2	Q13563	968 aa		11.71	□□□□□ -0.53
BRD8-223	ENST00000511898	THEMIS	Q8N1K5	641 aa	Predicted RBP	11.71	□□□□□ -0.53
BRD8-223	ENST00000511898	SPATA31D1	Q6ZQQ2	1576 aa		11.71	□□□□□ -0.54
BRD8-223	ENST00000511898	ZNF142	P52746	1687 aa	Predicted RBP	11.69	□□□□□ -0.54
BRD8-223	ENST00000511898	ZC3H13	Q5T200	1668 aa	Known RBP	11.69	□□□□□ -0.54
BRD8-223	ENST00000511898	CERK	Q8TCT0	537 aa		11.69	□□□□□ -0.54
BRD8-223	ENST00000511898	IDI1	Q13907	227 aa		11.68	□□□□□ -0.54
BRD8-223	ENST00000511898	CEP152	O94986	1710 aa		11.67	□□□□□ -0.54
BRD8-223	ENST00000511898	ANKLE2	Q86XL3	938 aa		11.67	□□□□□ -0.54
BRD8-223	ENST00000511898	NOS1	P29475	1434 aa		11.67	□□□□□ -0.54
BRD8-223	ENST00000511898	FBXO41	Q8TF61	875 aa		11.66	□□□□□ -0.54
BRD8-223	ENST00000511898	UGGT1	Q9NYU2	1555 aa		11.66	□□□□□ -0.54
BRD8-223	ENST00000511898	NAIP	Q13075	1403 aa		11.64	□□□□□ -0.55
BRD8-223	ENST00000511898	LTK	P29376	864 aa		11.64	□□□□□ -0.55
BRD8-223	ENST00000511898	NUP155	O75694	1391 aa		11.64	□□□□□ -0.55
BRD8-223	ENST00000511898	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	11.63	□□□□□ -0.55
BRD8-223	ENST00000511898	CFAP65	Q6ZU64	1925 aa	Known RBP	11.63	□□□□□ -0.55
BRD8-223	ENST00000511898	SLC52A1	Q9NWF4	448 aa		11.63	□□□□□ -0.55
BRD8-223	ENST00000511898	EFCAB6	Q5THR3	1501 aa		11.63	□□□□□ -0.55
BRD8-223	ENST00000511898	LTBP4	Q8N2S1	1624 aa		11.63	□□□□□ -0.55
BRD8-223	ENST00000511898	MED14	O60244	1454 aa		11.63	□□□□□ -0.55
BRD8-223	ENST00000511898	RPRD2	Q5VT52	1461 aa	Known RBP	11.62	□□□□□ -0.55
BRD8-223	ENST00000511898	UNC13B	O14795	1591 aa		11.62	□□□□□ -0.55
BRD8-223	ENST00000511898	ARHGAP23	Q9P227	1491 aa		11.61	□□□□□ -0.55
BRD8-223	ENST00000511898	NEURL4	Q96JN8	1562 aa		11.61	□□□□□ -0.55
BRD8-223	ENST00000511898	SYNM	O15061	1565 aa		11.6	□□□□□ -0.55
BRD8-223	ENST00000511898	TMEM2	Q9UHN6	1383 aa		11.6	□□□□□ -0.55
BRD8-223	ENST00000511898	TXNDC2	Q86VQ3	553 aa		11.6	□□□□□ -0.55
BRD8-223	ENST00000511898	HFM1	A2PYH4	1435 aa		11.6	□□□□□ -0.55
BRD8-223	ENST00000511898	NPHP4	O75161	1426 aa	Predicted RBP	11.6	□□□□□ -0.55
BRD8-223	ENST00000511898	SLIT1	O75093	1534 aa		11.59	□□□□□ -0.55
BRD8-223	ENST00000511898	UBR1	Q8IWV7	1749 aa		11.58	□□□□□ -0.56
BRD8-223	ENST00000511898	TET3	O43151	1660 aa		11.58	□□□□□ -0.56
BRD8-223	ENST00000511898	IQGAP3	Q86VI3	1631 aa		11.57	□□□□□ -0.56
BRD8-223	ENST00000511898	STAG3	Q9UJ98	1225 aa		11.57	□□□□□ -0.56
BRD8-223	ENST00000511898	PIK3C2B	O00750	1634 aa		11.57	□□□□□ -0.56
BRD8-223	ENST00000511898	EID1	Q9Y6B2	187 aa		11.56	□□□□□ -0.56
BRD8-223	ENST00000511898	SCAF11	Q99590	1463 aa	Known RBP	11.56	□□□□□ -0.56
BRD8-223	ENST00000511898		E9PCH4	1651 aa		11.55	□□□□□ -0.56
BRD8-223	ENST00000511898	KDM5A	P29375	1690 aa	Known RBP	11.53	□□□□□ -0.56
BRD8-223	ENST00000511898	GCC2	Q8IWJ2	1684 aa		11.53	□□□□□ -0.56
BRD8-223	ENST00000511898	IQSEC2	Q5JU85	1478 aa		11.53	□□□□□ -0.56
BRD8-223	ENST00000511898	POLR1A	O95602	1720 aa	Predicted RBP	11.53	□□□□□ -0.56
BRD8-223	ENST00000511898	TRIM52	Q96A61	297 aa		11.53	□□□□□ -0.56
BRD8-223	ENST00000511898	ZFYVE9	O95405	1425 aa		11.52	□□□□□ -0.56
BRD8-223	ENST00000511898	ADGRB3	O60242	1522 aa		11.51	□□□□□ -0.57
BRD8-223	ENST00000511898	SLC26A8	Q96RN1	970 aa		11.51	□□□□□ -0.57
BRD8-223	ENST00000511898	SLC4A1AP	Q9BWU0	796 aa	Known RBP	11.51	□□□□□ -0.57
BRD8-223	ENST00000511898	TMEM131L	A2VDJ0	1609 aa		11.5	□□□□□ -0.57
BRD8-223	ENST00000511898	IQGAP1	P46940	1657 aa		11.5	□□□□□ -0.57
BRD8-223	ENST00000511898	CHGA	P10645	457 aa	Known RBP	11.5	□□□□□ -0.57
BRD8-223	ENST00000511898	HDGF	P51858	240 aa	Known RBP	11.5	□□□□□ -0.57
BRD8-223	ENST00000511898	RIMS2	Q9UQ26	1411 aa		11.5	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms