RNA–Protein interactions for RNA: ENST00000511752.5

PTCD2-209, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 3

Gene PTCD2, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-209ENST00000511752 CHIC2Q9UKJ5 165 aa19.14■□□□□ 0.65
PTCD2-209ENST00000511752 RRP7BPQ9NSQ0 103 aa19.13■□□□□ 0.65
PTCD2-209ENST00000511752 FAM135AQ9P2D6 1515 aa19.13■□□□□ 0.65
PTCD2-209ENST00000511752 RNF17Q9BXT8 1623 aaKnown RBP19.11■□□□□ 0.65
PTCD2-209ENST00000511752 ADGRL2O95490 1459 aa19.11■□□□□ 0.65
PTCD2-209ENST00000511752 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.11■□□□□ 0.65
PTCD2-209ENST00000511752 ERBINQ96RT1 1412 aa19.1■□□□□ 0.65
PTCD2-209ENST00000511752 ZMYM3Q14202 1370 aa19.1■□□□□ 0.65
PTCD2-209ENST00000511752 PREX1Q8TCU6 1659 aa19.1■□□□□ 0.65
PTCD2-209ENST00000511752 KDM5DQ9BY66 1539 aa19.1■□□□□ 0.65
PTCD2-209ENST00000511752 NCOA1Q15788 1441 aa19.09■□□□□ 0.65
PTCD2-209ENST00000511752 SETD1BQ9UPS6 1966 aaKnown RBP19.09■□□□□ 0.65
PTCD2-209ENST00000511752 WASHC2CQ9Y4E1 1318 aa19.07■□□□□ 0.64
PTCD2-209ENST00000511752 LMTK3Q96Q04 1460 aa19.07■□□□□ 0.64
PTCD2-209ENST00000511752 ZC3H13Q5T200 1668 aaKnown RBP19.06■□□□□ 0.64
PTCD2-209ENST00000511752 RRBP1Q9P2E9 1410 aaKnown RBP19.06■□□□□ 0.64
PTCD2-209ENST00000511752 NPATQ14207 1427 aa19.05■□□□□ 0.64
PTCD2-209ENST00000511752 MROH1Q8NDA8 1641 aa19.04■□□□□ 0.64
PTCD2-209ENST00000511752 UHRF1BP1Q6BDS2 1440 aa19.04■□□□□ 0.64
PTCD2-209ENST00000511752 PTPRKQ15262 1439 aa19.03■□□□□ 0.64
PTCD2-209ENST00000511752 ITGAEP38570 1179 aa19.03■□□□□ 0.64
PTCD2-209ENST00000511752 DEPDC5O75140 1603 aa19.02■□□□□ 0.64
PTCD2-209ENST00000511752 ROCK1Q13464 1354 aa19.02■□□□□ 0.64
PTCD2-209ENST00000511752 PRDM15P57071 1507 aaPredicted RBP19.01■□□□□ 0.63
PTCD2-209ENST00000511752 ABCC3O15438 1527 aa19■□□□□ 0.63
PTCD2-209ENST00000511752 CEP152O94986 1710 aa19■□□□□ 0.63
PTCD2-209ENST00000511752 KANK1Q14678 1352 aa19■□□□□ 0.63
PTCD2-209ENST00000511752 ANKRD50Q9ULJ7 1429 aa19■□□□□ 0.63
PTCD2-209ENST00000511752 PZPP20742 1482 aa18.99■□□□□ 0.63
PTCD2-209ENST00000511752 CAMSAP1Q5T5Y3 1602 aa18.97■□□□□ 0.63
PTCD2-209ENST00000511752 HSPA2P54652 639 aa18.97■□□□□ 0.63
PTCD2-209ENST00000511752 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.97■□□□□ 0.63
PTCD2-209ENST00000511752 MYO3AQ8NEV4 1616 aa18.96■□□□□ 0.63
PTCD2-209ENST00000511752 ZNF142P52746 1687 aaPredicted RBP18.93■□□□□ 0.62
PTCD2-209ENST00000511752 FBXO31Q5XUX0 539 aaPredicted RBP18.93■□□□□ 0.62
PTCD2-209ENST00000511752 TNRQ92752 1358 aa18.93■□□□□ 0.62
PTCD2-209ENST00000511752 VWDEQ8N2E2 1590 aa18.92■□□□□ 0.62
PTCD2-209ENST00000511752 CEP170BQ9Y4F5 1589 aaPredicted RBP18.91■□□□□ 0.62
PTCD2-209ENST00000511752 LMTK2Q8IWU2 1503 aa18.9■□□□□ 0.62
PTCD2-209ENST00000511752 UNC13BO14795 1591 aa18.9■□□□□ 0.62
PTCD2-209ENST00000511752 ARHGAP31Q2M1Z3 1444 aa18.9■□□□□ 0.62
PTCD2-209ENST00000511752 SPATA31D1Q6ZQQ2 1576 aa18.89■□□□□ 0.62
PTCD2-209ENST00000511752 CFAP65Q6ZU64 1925 aaKnown RBP18.89■□□□□ 0.61
PTCD2-209ENST00000511752 A2ML1A8K2U0 1454 aa18.88■□□□□ 0.61
PTCD2-209ENST00000511752 ERVK-7P63135 1459 aa18.88■□□□□ 0.61
PTCD2-209ENST00000511752 GCC2Q8IWJ2 1684 aa18.86■□□□□ 0.61
PTCD2-209ENST00000511752 NLRP1Q9C000 1473 aa18.86■□□□□ 0.61
PTCD2-209ENST00000511752 EFCAB6Q5THR3 1501 aa18.85■□□□□ 0.61
PTCD2-209ENST00000511752 TET3O43151 1660 aa18.85■□□□□ 0.61
PTCD2-209ENST00000511752 STRCQ7RTU9 1775 aa18.84■□□□□ 0.61
PTCD2-209ENST00000511752 NAIPQ13075 1403 aa18.83■□□□□ 0.6
PTCD2-209ENST00000511752 IQGAP3Q86VI3 1631 aa18.82■□□□□ 0.6
PTCD2-209ENST00000511752 DMRT2Q9Y5R5 561 aa18.82■□□□□ 0.6
PTCD2-209ENST00000511752 HFM1A2PYH4 1435 aa18.82■□□□□ 0.6
PTCD2-209ENST00000511752 PLA2R1Q13018 1463 aa18.81■□□□□ 0.6
PTCD2-209ENST00000511752 NUP155O75694 1391 aa18.81■□□□□ 0.6
PTCD2-209ENST00000511752 RPRD2Q5VT52 1461 aaKnown RBP18.8■□□□□ 0.6
PTCD2-209ENST00000511752 UGGT1Q9NYU2 1555 aa18.8■□□□□ 0.6
PTCD2-209ENST00000511752 THEMISQ8N1K5 641 aaPredicted RBP18.78■□□□□ 0.6
PTCD2-209ENST00000511752 PKD2Q13563 968 aa18.76■□□□□ 0.59
PTCD2-209ENST00000511752 E9PCH4 1651 aa18.76■□□□□ 0.59
PTCD2-209ENST00000511752 PTPRTO14522 1441 aa18.75■□□□□ 0.59
PTCD2-209ENST00000511752 NOS1P29475 1434 aa18.75■□□□□ 0.59
PTCD2-209ENST00000511752 UBR1Q8IWV7 1749 aa18.74■□□□□ 0.59
PTCD2-209ENST00000511752 SYNMO15061 1565 aa18.74■□□□□ 0.59
PTCD2-209ENST00000511752 POLR1AO95602 1720 aaPredicted RBP18.74■□□□□ 0.59
PTCD2-209ENST00000511752 NCKAP5LQ9HCH0 1330 aa18.74■□□□□ 0.59
PTCD2-209ENST00000511752 PIK3C2BO00750 1634 aa18.73■□□□□ 0.59
PTCD2-209ENST00000511752 KDM5AP29375 1690 aaKnown RBP18.71■□□□□ 0.59
PTCD2-209ENST00000511752 TRIM52Q96A61 297 aa18.71■□□□□ 0.59
PTCD2-209ENST00000511752 SLC52A1Q9NWF4 448 aa18.71■□□□□ 0.59
PTCD2-209ENST00000511752 STAG3Q9UJ98 1225 aa18.71■□□□□ 0.59
PTCD2-209ENST00000511752 IDI1Q13907 227 aa18.7■□□□□ 0.58
PTCD2-209ENST00000511752 ANKLE2Q86XL3 938 aa18.7■□□□□ 0.58
PTCD2-209ENST00000511752 ADGRB3O60242 1522 aa18.66■□□□□ 0.58
PTCD2-209ENST00000511752 NEURL4Q96JN8 1562 aa18.66■□□□□ 0.58
PTCD2-209ENST00000511752 SPHKAPQ2M3C7 1700 aa18.66■□□□□ 0.58
PTCD2-209ENST00000511752 SLIT1O75093 1534 aa18.65■□□□□ 0.58
PTCD2-209ENST00000511752 ACIN1Q9UKV3 1341 aaKnown RBP18.65■□□□□ 0.58
PTCD2-209ENST00000511752 SETD5Q9C0A6 1442 aa18.65■□□□□ 0.58
PTCD2-209ENST00000511752 ARHGAP23Q9P227 1491 aa18.64■□□□□ 0.57
PTCD2-209ENST00000511752 MED14O60244 1454 aa18.63■□□□□ 0.57
PTCD2-209ENST00000511752 SLC4A1APQ9BWU0 796 aaKnown RBP18.62■□□□□ 0.57
PTCD2-209ENST00000511752 EID1Q9Y6B2 187 aa18.62■□□□□ 0.57
PTCD2-209ENST00000511752 TMEM2Q9UHN6 1383 aa18.62■□□□□ 0.57
PTCD2-209ENST00000511752 NPHP4O75161 1426 aaPredicted RBP18.62■□□□□ 0.57
PTCD2-209ENST00000511752 SCAF11Q99590 1463 aaKnown RBP18.62■□□□□ 0.57
PTCD2-209ENST00000511752 IQGAP1P46940 1657 aa18.62■□□□□ 0.57
PTCD2-209ENST00000511752 MYO5BQ9ULV0 1848 aa18.61■□□□□ 0.57
PTCD2-209ENST00000511752 TMEM131LA2VDJ0 1609 aa18.6■□□□□ 0.57
PTCD2-209ENST00000511752 TXNDC2Q86VQ3 553 aa18.6■□□□□ 0.57
PTCD2-209ENST00000511752 CHGAP10645 457 aaKnown RBP18.58■□□□□ 0.56
PTCD2-209ENST00000511752 LTKP29376 864 aa18.57■□□□□ 0.56
PTCD2-209ENST00000511752 TRPM2O94759 1503 aa18.57■□□□□ 0.56
PTCD2-209ENST00000511752 RAB3GAP2Q9H2M9 1393 aa18.56■□□□□ 0.56
PTCD2-209ENST00000511752 HDGFP51858 240 aaKnown RBP18.56■□□□□ 0.56
PTCD2-209ENST00000511752 CERKQ8TCT0 537 aa18.56■□□□□ 0.56
PTCD2-209ENST00000511752 LTBP4Q8N2S1 1624 aa18.56■□□□□ 0.56
PTCD2-209ENST00000511752 ZNF335Q9H4Z2 1342 aaPredicted RBP18.55■□□□□ 0.56
PTCD2-209ENST00000511752 MPHOSPH9Q99550 1183 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms