RNA–Protein interactions for RNA: ENST00000511697.1

CALCOCO2-219, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-219ENST00000511697 LTBP4Q8N2S1 1624 aa15.79■□□□□ 0.12
CALCOCO2-219ENST00000511697 RTEL1-TNFRSF6BF6WH68 1400 aa15.78■□□□□ 0.12
CALCOCO2-219ENST00000511697 NCKAP5LQ9HCH0 1330 aa15.78■□□□□ 0.12
CALCOCO2-219ENST00000511697 DHX29Q7Z478 1369 aaKnown RBP15.76■□□□□ 0.11
CALCOCO2-219ENST00000511697 RNF216Q9NWF9 866 aaPredicted RBP15.76■□□□□ 0.11
CALCOCO2-219ENST00000511697 LOC105371045A0A1W2PR82 267 aa15.75■□□□□ 0.11
CALCOCO2-219ENST00000511697 KIF3BO15066 747 aa15.74■□□□□ 0.11
CALCOCO2-219ENST00000511697 VPS8Q8N3P4 1428 aa15.74■□□□□ 0.11
CALCOCO2-219ENST00000511697 PLA2R1Q13018 1463 aa15.73■□□□□ 0.11
CALCOCO2-219ENST00000511697 ARHGEF5Q12774 1597 aa15.73■□□□□ 0.11
CALCOCO2-219ENST00000511697 KDM5DQ9BY66 1539 aa15.73■□□□□ 0.11
CALCOCO2-219ENST00000511697 LRRC9Q6ZRR7 1453 aa15.72■□□□□ 0.11
CALCOCO2-219ENST00000511697 DNMT1P26358 1616 aaKnown RBP15.72■□□□□ 0.11
CALCOCO2-219ENST00000511697 TCOF1Q13428 1488 aaKnown RBP15.71■□□□□ 0.11
CALCOCO2-219ENST00000511697 ZNF335Q9H4Z2 1342 aaPredicted RBP15.71■□□□□ 0.11
CALCOCO2-219ENST00000511697 A2ML1A8K2U0 1454 aa15.71■□□□□ 0.1
CALCOCO2-219ENST00000511697 PKD2Q13563 968 aa15.7■□□□□ 0.1
CALCOCO2-219ENST00000511697 RSPH4AQ5TD94 716 aa15.7■□□□□ 0.1
CALCOCO2-219ENST00000511697 FBXO31Q5XUX0 539 aaPredicted RBP15.7■□□□□ 0.1
CALCOCO2-219ENST00000511697 IQSEC2Q5JU85 1478 aa15.7■□□□□ 0.1
CALCOCO2-219ENST00000511697 POLR1AO95602 1720 aaPredicted RBP15.69■□□□□ 0.1
CALCOCO2-219ENST00000511697 PZPP20742 1482 aa15.69■□□□□ 0.1
CALCOCO2-219ENST00000511697 WASHC2CQ9Y4E1 1318 aa15.68■□□□□ 0.1
CALCOCO2-219ENST00000511697 TNRQ92752 1358 aa15.68■□□□□ 0.1
CALCOCO2-219ENST00000511697 TSPY4P0CV99 314 aa15.68■□□□□ 0.1
CALCOCO2-219ENST00000511697 TSPY10P0CW01 314 aa15.68■□□□□ 0.1
CALCOCO2-219ENST00000511697 FAM135AQ9P2D6 1515 aa15.68■□□□□ 0.1
CALCOCO2-219ENST00000511697 KANK4Q5T7N3 995 aaPredicted RBP15.67■□□□□ 0.1
CALCOCO2-219ENST00000511697 DISP3Q9P2K9 1392 aa15.66■□□□□ 0.1
CALCOCO2-219ENST00000511697 MAST1Q9Y2H9 1570 aa15.65■□□□□ 0.1
CALCOCO2-219ENST00000511697 RNF17Q9BXT8 1623 aaKnown RBP15.65■□□□□ 0.1
CALCOCO2-219ENST00000511697 NEURL4Q96JN8 1562 aa15.64■□□□□ 0.09
CALCOCO2-219ENST00000511697 MAP3K1Q13233 1512 aa15.63■□□□□ 0.09
CALCOCO2-219ENST00000511697 SPATA31D1Q6ZQQ2 1576 aa15.63■□□□□ 0.09
CALCOCO2-219ENST00000511697 MYOM3Q5VTT5 1437 aa15.63■□□□□ 0.09
CALCOCO2-219ENST00000511697 EIF2AK4Q9P2K8 1649 aaKnown RBP15.62■□□□□ 0.09
CALCOCO2-219ENST00000511697 UBAP1LF5GYI3 381 aa15.62■□□□□ 0.09
CALCOCO2-219ENST00000511697 ZC3H13Q5T200 1668 aaKnown RBP15.62■□□□□ 0.09
CALCOCO2-219ENST00000511697 CFAP65Q6ZU64 1925 aaKnown RBP15.62■□□□□ 0.09
CALCOCO2-219ENST00000511697 CEP152O94986 1710 aa15.62■□□□□ 0.09
CALCOCO2-219ENST00000511697 ABCC3O15438 1527 aa15.62■□□□□ 0.09
CALCOCO2-219ENST00000511697 UGGT1Q9NYU2 1555 aa15.61■□□□□ 0.09
CALCOCO2-219ENST00000511697 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.61■□□□□ 0.09
CALCOCO2-219ENST00000511697 MIA2Q96PC5 1412 aa15.6■□□□□ 0.09
CALCOCO2-219ENST00000511697 NLRP1Q9C000 1473 aa15.6■□□□□ 0.09
CALCOCO2-219ENST00000511697 MROH1Q8NDA8 1641 aa15.6■□□□□ 0.09
CALCOCO2-219ENST00000511697 HOXD11P31277 338 aaPredicted RBP15.59■□□□□ 0.09
CALCOCO2-219ENST00000511697 CROCC2H7BZ55 1655 aa15.59■□□□□ 0.09
CALCOCO2-219ENST00000511697 ILDR2Q71H61 639 aa15.58■□□□□ 0.08
CALCOCO2-219ENST00000511697 ANKLE2Q86XL3 938 aa15.57■□□□□ 0.08
CALCOCO2-219ENST00000511697 DUOX2Q9NRD8 1548 aa15.57■□□□□ 0.08
CALCOCO2-219ENST00000511697 PTPN23Q9H3S7 1636 aa15.57■□□□□ 0.08
CALCOCO2-219ENST00000511697 THEMISQ8N1K5 641 aaPredicted RBP15.56■□□□□ 0.08
CALCOCO2-219ENST00000511697 IQGAP1P46940 1657 aa15.55■□□□□ 0.08
CALCOCO2-219ENST00000511697 DEPDC5O75140 1603 aa15.55■□□□□ 0.08
CALCOCO2-219ENST00000511697 CPS1P31327 1500 aa15.55■□□□□ 0.08
CALCOCO2-219ENST00000511697 ERVK-7P63135 1459 aa15.55■□□□□ 0.08
CALCOCO2-219ENST00000511697 SHANK2Q9UPX8 1470 aa15.55■□□□□ 0.08
CALCOCO2-219ENST00000511697 VWDEQ8N2E2 1590 aa15.54■□□□□ 0.08
CALCOCO2-219ENST00000511697 NPHP4O75161 1426 aaPredicted RBP15.54■□□□□ 0.08
CALCOCO2-219ENST00000511697 APLP2Q06481 763 aa15.54■□□□□ 0.08
CALCOCO2-219ENST00000511697 KIF15Q9NS87 1388 aa15.53■□□□□ 0.08
CALCOCO2-219ENST00000511697 ABCC5O15440 1437 aa15.52■□□□□ 0.08
CALCOCO2-219ENST00000511697 UBR1Q8IWV7 1749 aa15.52■□□□□ 0.08
CALCOCO2-219ENST00000511697 RRP7BPQ9NSQ0 103 aa15.52■□□□□ 0.08
CALCOCO2-219ENST00000511697 PRDM15P57071 1507 aaPredicted RBP15.52■□□□□ 0.07
CALCOCO2-219ENST00000511697 MED14O60244 1454 aa15.52■□□□□ 0.07
CALCOCO2-219ENST00000511697 PIP4K2BP78356 416 aa15.51■□□□□ 0.07
CALCOCO2-219ENST00000511697 DAPK1P53355 1430 aa15.5■□□□□ 0.07
CALCOCO2-219ENST00000511697 ERBINQ96RT1 1412 aa15.5■□□□□ 0.07
CALCOCO2-219ENST00000511697 STRCP1A6NGW2 1772 aa15.49■□□□□ 0.07
CALCOCO2-219ENST00000511697 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.49■□□□□ 0.072e-14■■■□□ 15
CALCOCO2-219ENST00000511697 FGD6Q6ZV73 1430 aa15.49■□□□□ 0.07
CALCOCO2-219ENST00000511697 TOM1O60784 492 aa15.47■□□□□ 0.07
CALCOCO2-219ENST00000511697 HSPA1LP34931 641 aa15.46■□□□□ 0.07
CALCOCO2-219ENST00000511697 CHIC2Q9UKJ5 165 aa15.46■□□□□ 0.07
CALCOCO2-219ENST00000511697 SOCS7O14512 581 aa15.45■□□□□ 0.06
CALCOCO2-219ENST00000511697 PIK3C2BO00750 1634 aa15.45■□□□□ 0.06
CALCOCO2-219ENST00000511697 SCAF11Q99590 1463 aaKnown RBP15.45■□□□□ 0.06
CALCOCO2-219ENST00000511697 ARHGAP31Q2M1Z3 1444 aa15.44■□□□□ 0.06
CALCOCO2-219ENST00000511697 SYNMO15061 1565 aa15.44■□□□□ 0.06
CALCOCO2-219ENST00000511697 ALKQ9UM73 1620 aa15.43■□□□□ 0.06
CALCOCO2-219ENST00000511697 KANK1Q14678 1352 aa15.43■□□□□ 0.06
CALCOCO2-219ENST00000511697 ANKRD30AQ9BXX3 1397 aa15.43■□□□□ 0.06
CALCOCO2-219ENST00000511697 LRRC7Q96NW7 1537 aa15.43■□□□□ 0.06
CALCOCO2-219ENST00000511697 SLIT1O75093 1534 aa15.42■□□□□ 0.06
CALCOCO2-219ENST00000511697 ARHGAP23Q9P227 1491 aa15.41■□□□□ 0.06
CALCOCO2-219ENST00000511697 LTKP29376 864 aa15.41■□□□□ 0.06
CALCOCO2-219ENST00000511697 MED1Q15648 1581 aaPredicted RBP15.41■□□□□ 0.06
CALCOCO2-219ENST00000511697 TXNDC2Q86VQ3 553 aa15.4■□□□□ 0.06
CALCOCO2-219ENST00000511697 STAG3Q9UJ98 1225 aa15.39■□□□□ 0.05
CALCOCO2-219ENST00000511697 LMTK2Q8IWU2 1503 aa15.38■□□□□ 0.05
CALCOCO2-219ENST00000511697 FAM50AQ14320 339 aaKnown RBP15.38■□□□□ 0.05
CALCOCO2-219ENST00000511697 EID1Q9Y6B2 187 aa15.38■□□□□ 0.05
CALCOCO2-219ENST00000511697 XIRP1Q702N8 1843 aaKnown RBP15.38■□□□□ 0.05
CALCOCO2-219ENST00000511697 EFCAB6Q5THR3 1501 aa15.38■□□□□ 0.05
CALCOCO2-219ENST00000511697 TMEM2Q9UHN6 1383 aa15.36■□□□□ 0.05
CALCOCO2-219ENST00000511697 KDM5AP29375 1690 aaKnown RBP15.36■□□□□ 0.05
CALCOCO2-219ENST00000511697 ADGRL2O95490 1459 aa15.36■□□□□ 0.05
CALCOCO2-219ENST00000511697 ZBTB22O15209 634 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms