RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 GCC2Q8IWJ2 1684 aa13.55□□□□□ -0.24
NR1I3-228ENST00000511676 PTPRKQ15262 1439 aa13.55□□□□□ -0.24
NR1I3-228ENST00000511676 IQSEC2Q5JU85 1478 aa13.54□□□□□ -0.24
NR1I3-228ENST00000511676 CCDC141Q6ZP82 1450 aa13.54□□□□□ -0.24
NR1I3-228ENST00000511676 MBD5Q9P267 1494 aa13.54□□□□□ -0.24
NR1I3-228ENST00000511676 NAIPQ13075 1403 aa13.53□□□□□ -0.24
NR1I3-228ENST00000511676 MAST1Q9Y2H9 1570 aa13.53□□□□□ -0.24
NR1I3-228ENST00000511676 ADGBQ8N7X0 1667 aa13.53□□□□□ -0.24
NR1I3-228ENST00000511676 ABCC1P33527 1531 aa13.52□□□□□ -0.25
NR1I3-228ENST00000511676 ZMYM3Q14202 1370 aa13.51□□□□□ -0.25
NR1I3-228ENST00000511676 RAB3GAP2Q9H2M9 1393 aa13.51□□□□□ -0.25
NR1I3-228ENST00000511676 DIP2CQ9Y2E4 1556 aa13.49□□□□□ -0.25
NR1I3-228ENST00000511676 ANKRD30AQ9BXX3 1397 aa13.49□□□□□ -0.25
NR1I3-228ENST00000511676 ZNF644Q9H582 1327 aaPredicted RBP13.49□□□□□ -0.25
NR1I3-228ENST00000511676 TSPY4P0CV99 314 aa13.49□□□□□ -0.25
NR1I3-228ENST00000511676 TSPY10P0CW01 314 aa13.49□□□□□ -0.25
NR1I3-228ENST00000511676 SYCP2Q9BX26 1530 aa13.49□□□□□ -0.25
NR1I3-228ENST00000511676 NCOA1Q15788 1441 aa13.48□□□□□ -0.25
NR1I3-228ENST00000511676 ITGAEP38570 1179 aa13.48□□□□□ -0.25
NR1I3-228ENST00000511676 HNRNPMP52272 730 aaKnown RBP eCLIP13.48□□□□□ -0.25
NR1I3-228ENST00000511676 GGT6Q6P531 493 aa13.48□□□□□ -0.25
NR1I3-228ENST00000511676 PLXNC1O60486 1568 aa13.47□□□□□ -0.25
NR1I3-228ENST00000511676 RTEL1-TNFRSF6BF6WH68 1400 aa13.47□□□□□ -0.25
NR1I3-228ENST00000511676 CCER1Q8TC90 406 aaPredicted RBP13.46□□□□□ -0.25
NR1I3-228ENST00000511676 DHX57Q6P158 1386 aaKnown RBP13.45□□□□□ -0.26
NR1I3-228ENST00000511676 DISP3Q9P2K9 1392 aa13.45□□□□□ -0.26
NR1I3-228ENST00000511676 A2MP01023 1474 aa13.45□□□□□ -0.26
NR1I3-228ENST00000511676 MROH2AA6NES4 1674 aa13.44□□□□□ -0.26
NR1I3-228ENST00000511676 THEMISQ8N1K5 641 aaPredicted RBP13.44□□□□□ -0.26
NR1I3-228ENST00000511676 PLA2R1Q13018 1463 aa13.43□□□□□ -0.26
NR1I3-228ENST00000511676 TOM1O60784 492 aa13.43□□□□□ -0.26
NR1I3-228ENST00000511676 C3P01024 1663 aa13.42□□□□□ -0.26
NR1I3-228ENST00000511676 FAM135AQ9P2D6 1515 aa13.42□□□□□ -0.26
NR1I3-228ENST00000511676 ABCA6Q8N139 1617 aa13.42□□□□□ -0.26
NR1I3-228ENST00000511676 KIDINS220Q9ULH0 1771 aa13.41□□□□□ -0.26
NR1I3-228ENST00000511676 ATP7AQ04656 1500 aa13.41□□□□□ -0.26
NR1I3-228ENST00000511676 SOCS7O14512 581 aa13.41□□□□□ -0.26
NR1I3-228ENST00000511676 ANKLE2Q86XL3 938 aa13.41□□□□□ -0.26
NR1I3-228ENST00000511676 DHX29Q7Z478 1369 aaKnown RBP13.41□□□□□ -0.26
NR1I3-228ENST00000511676 WASHC2CQ9Y4E1 1318 aa13.4□□□□□ -0.26
NR1I3-228ENST00000511676 ANKRD50Q9ULJ7 1429 aa13.39□□□□□ -0.27
NR1I3-228ENST00000511676 SIGLEC1Q9BZZ2 1709 aa13.39□□□□□ -0.27
NR1I3-228ENST00000511676 UBAP1LF5GYI3 381 aa13.39□□□□□ -0.27
NR1I3-228ENST00000511676 NCBP3Q53F19 620 aaKnown RBP13.39□□□□□ -0.27
NR1I3-228ENST00000511676 KIF15Q9NS87 1388 aa13.39□□□□□ -0.27
NR1I3-228ENST00000511676 INO80Q9ULG1 1556 aaPredicted RBP13.39□□□□□ -0.27
NR1I3-228ENST00000511676 STRCQ7RTU9 1775 aa13.39□□□□□ -0.27
NR1I3-228ENST00000511676 DUOX2Q9NRD8 1548 aa13.39□□□□□ -0.27
NR1I3-228ENST00000511676 ERBINQ96RT1 1412 aa13.39□□□□□ -0.27
NR1I3-228ENST00000511676 KIF3BO15066 747 aa13.38□□□□□ -0.27
NR1I3-228ENST00000511676 KDM5DQ9BY66 1539 aa13.38□□□□□ -0.27
NR1I3-228ENST00000511676 MAPK8IP2Q13387 824 aaPredicted RBP13.37□□□□□ -0.27
NR1I3-228ENST00000511676 CHIC2Q9UKJ5 165 aa13.37□□□□□ -0.27
NR1I3-228ENST00000511676 CAMSAP1Q5T5Y3 1602 aa13.37□□□□□ -0.27
NR1I3-228ENST00000511676 RRP7BPQ9NSQ0 103 aa13.36□□□□□ -0.27
NR1I3-228ENST00000511676 NCKAP5LQ9HCH0 1330 aa13.36□□□□□ -0.27
NR1I3-228ENST00000511676 SCAF1Q9H7N4 1312 aaKnown RBP13.35□□□□□ -0.27
NR1I3-228ENST00000511676 A2ML1A8K2U0 1454 aa13.34□□□□□ -0.27
NR1I3-228ENST00000511676 TNRQ92752 1358 aa13.32□□□□□ -0.28
NR1I3-228ENST00000511676 EIF2AK4Q9P2K8 1649 aaKnown RBP13.32□□□□□ -0.28
NR1I3-228ENST00000511676 NLRP1Q9C000 1473 aa13.32□□□□□ -0.28
NR1I3-228ENST00000511676 NPM3O75607 178 aaKnown RBP13.32□□□□□ -0.28
NR1I3-228ENST00000511676 TIMELESSQ9UNS1 1208 aa13.32□□□□□ -0.28
NR1I3-228ENST00000511676 UNC13BO14795 1591 aa13.32□□□□□ -0.28
NR1I3-228ENST00000511676 CEP170BQ9Y4F5 1589 aaPredicted RBP13.31□□□□□ -0.28
NR1I3-228ENST00000511676 LTBP4Q8N2S1 1624 aa13.31□□□□□ -0.28
NR1I3-228ENST00000511676 CPS1P31327 1500 aa13.3□□□□□ -0.28
NR1I3-228ENST00000511676 ZNF142P52746 1687 aaPredicted RBP13.29□□□□□ -0.28
NR1I3-228ENST00000511676 ZNF335Q9H4Z2 1342 aaPredicted RBP13.29□□□□□ -0.28
NR1I3-228ENST00000511676 CLTCQ00610 1675 aaKnown RBP13.28□□□□□ -0.28
NR1I3-228ENST00000511676 EID1Q9Y6B2 187 aa13.28□□□□□ -0.28
NR1I3-228ENST00000511676 PZPP20742 1482 aa13.28□□□□□ -0.28
NR1I3-228ENST00000511676 CNKSR2Q8WXI2 1034 aa13.27□□□□□ -0.29
NR1I3-228ENST00000511676 DEPDC5O75140 1603 aa13.27□□□□□ -0.29
NR1I3-228ENST00000511676 HDGFP51858 240 aaKnown RBP13.26□□□□□ -0.29
NR1I3-228ENST00000511676 IQGAP3Q86VI3 1631 aa13.25□□□□□ -0.29
NR1I3-228ENST00000511676 MYO3AQ8NEV4 1616 aa13.25□□□□□ -0.29
NR1I3-228ENST00000511676 MPHOSPH9Q99550 1183 aa13.25□□□□□ -0.29
NR1I3-228ENST00000511676 SPATA31D1Q6ZQQ2 1576 aa13.24□□□□□ -0.29
NR1I3-228ENST00000511676 KANK1Q14678 1352 aa13.24□□□□□ -0.29
NR1I3-228ENST00000511676 TRIM52Q96A61 297 aa13.24□□□□□ -0.29
NR1I3-228ENST00000511676 STAG3Q9UJ98 1225 aa13.24□□□□□ -0.29
NR1I3-228ENST00000511676 PRDM15P57071 1507 aaPredicted RBP13.23□□□□□ -0.29
NR1I3-228ENST00000511676 VWDEQ8N2E2 1590 aa13.23□□□□□ -0.29
NR1I3-228ENST00000511676 NUP155O75694 1391 aa13.22□□□□□ -0.29
NR1I3-228ENST00000511676 RNF17Q9BXT8 1623 aaKnown RBP13.22□□□□□ -0.29
NR1I3-228ENST00000511676 UGGT1Q9NYU2 1555 aa13.22□□□□□ -0.29
NR1I3-228ENST00000511676 PIP4K2BP78356 416 aa13.21□□□□□ -0.29
NR1I3-228ENST00000511676 FBXO31Q5XUX0 539 aaPredicted RBP13.21□□□□□ -0.29
NR1I3-228ENST00000511676 SLC4A1APQ9BWU0 796 aaKnown RBP13.21□□□□□ -0.29
NR1I3-228ENST00000511676 MED14O60244 1454 aa13.21□□□□□ -0.3
NR1I3-228ENST00000511676 ANKRD30BQ9BXX2 1392 aa13.2□□□□□ -0.3
NR1I3-228ENST00000511676 NPHP4O75161 1426 aaPredicted RBP13.2□□□□□ -0.3
NR1I3-228ENST00000511676 LMTK2Q8IWU2 1503 aa13.19□□□□□ -0.3
NR1I3-228ENST00000511676 ILDR2Q71H61 639 aa13.19□□□□□ -0.3
NR1I3-228ENST00000511676 RPRD2Q5VT52 1461 aaKnown RBP13.18□□□□□ -0.3
NR1I3-228ENST00000511676 ZC3H13Q5T200 1668 aaKnown RBP13.17□□□□□ -0.3
NR1I3-228ENST00000511676 MROH1Q8NDA8 1641 aa13.17□□□□□ -0.3
NR1I3-228ENST00000511676 TET3O43151 1660 aa13.16□□□□□ -0.3
NR1I3-228ENST00000511676 TXNDC2Q86VQ3 553 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms