RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 ZMYM3Q14202 1370 aa10.88□□□□□ -0.67
PDLIM5-215ENST00000511586 WASHC2CQ9Y4E1 1318 aa10.87□□□□□ -0.67
PDLIM5-215ENST00000511586 PTPRKQ15262 1439 aa10.87□□□□□ -0.67
PDLIM5-215ENST00000511586 ERBINQ96RT1 1412 aa10.87□□□□□ -0.67
PDLIM5-215ENST00000511586 ROCK1Q13464 1354 aa10.87□□□□□ -0.67
PDLIM5-215ENST00000511586 EIF2AK4Q9P2K8 1649 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-215ENST00000511586 FAM135AQ9P2D6 1515 aa10.84□□□□□ -0.67
PDLIM5-215ENST00000511586 ANKRD50Q9ULJ7 1429 aa10.84□□□□□ -0.67
PDLIM5-215ENST00000511586 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.83□□□□□ -0.682e-6■■□□□ 11.5
PDLIM5-215ENST00000511586 RNF17Q9BXT8 1623 aaKnown RBP10.83□□□□□ -0.68
PDLIM5-215ENST00000511586 KDM5DQ9BY66 1539 aa10.83□□□□□ -0.68
PDLIM5-215ENST00000511586 MROH2AA6NES4 1674 aa10.82□□□□□ -0.68
PDLIM5-215ENST00000511586 CLTCQ00610 1675 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-215ENST00000511586 KANK1Q14678 1352 aa10.82□□□□□ -0.68
PDLIM5-215ENST00000511586 NPATQ14207 1427 aa10.82□□□□□ -0.68
PDLIM5-215ENST00000511586 C3P01024 1663 aa10.82□□□□□ -0.68
PDLIM5-215ENST00000511586 LMTK3Q96Q04 1460 aa10.8□□□□□ -0.68
PDLIM5-215ENST00000511586 ABCC3O15438 1527 aa10.79□□□□□ -0.68
PDLIM5-215ENST00000511586 UHRF1BP1Q6BDS2 1440 aa10.79□□□□□ -0.68
PDLIM5-215ENST00000511586 FBXO31Q5XUX0 539 aaPredicted RBP10.79□□□□□ -0.68
PDLIM5-215ENST00000511586 MROH1Q8NDA8 1641 aa10.79□□□□□ -0.68
PDLIM5-215ENST00000511586 PRDM15P57071 1507 aaPredicted RBP10.79□□□□□ -0.68
PDLIM5-215ENST00000511586 SETD1BQ9UPS6 1966 aaKnown RBP10.78□□□□□ -0.68
PDLIM5-215ENST00000511586 PZPP20742 1482 aa10.78□□□□□ -0.68
PDLIM5-215ENST00000511586 DEPDC5O75140 1603 aa10.77□□□□□ -0.68
PDLIM5-215ENST00000511586 ZC3H13Q5T200 1668 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-215ENST00000511586 HSPA2P54652 639 aa10.76□□□□□ -0.69
PDLIM5-215ENST00000511586 TNRQ92752 1358 aa10.76□□□□□ -0.69
PDLIM5-215ENST00000511586 PREX1Q8TCU6 1659 aa10.76□□□□□ -0.69
PDLIM5-215ENST00000511586 NAIPQ13075 1403 aa10.75□□□□□ -0.69
PDLIM5-215ENST00000511586 ARHGAP31Q2M1Z3 1444 aa10.75□□□□□ -0.69
PDLIM5-215ENST00000511586 VWDEQ8N2E2 1590 aa10.75□□□□□ -0.69
PDLIM5-215ENST00000511586 HFM1A2PYH4 1435 aa10.75□□□□□ -0.69
PDLIM5-215ENST00000511586 LMTK2Q8IWU2 1503 aa10.74□□□□□ -0.69
PDLIM5-215ENST00000511586 NUP155O75694 1391 aa10.74□□□□□ -0.69
PDLIM5-215ENST00000511586 CEP152O94986 1710 aa10.73□□□□□ -0.69
PDLIM5-215ENST00000511586 CAMSAP1Q5T5Y3 1602 aa10.73□□□□□ -0.69
PDLIM5-215ENST00000511586 ERVK-7P63135 1459 aa10.72□□□□□ -0.69
PDLIM5-215ENST00000511586 NLRP1Q9C000 1473 aa10.72□□□□□ -0.69
PDLIM5-215ENST00000511586 UNC13BO14795 1591 aa10.72□□□□□ -0.69
PDLIM5-215ENST00000511586 A2ML1A8K2U0 1454 aa10.71□□□□□ -0.69
PDLIM5-215ENST00000511586 SPATA31D1Q6ZQQ2 1576 aa10.71□□□□□ -0.69
PDLIM5-215ENST00000511586 THEMISQ8N1K5 641 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-215ENST00000511586 TRIM52Q96A61 297 aa10.7□□□□□ -0.7
PDLIM5-215ENST00000511586 GCC2Q8IWJ2 1684 aa10.69□□□□□ -0.7
PDLIM5-215ENST00000511586 MYO3AQ8NEV4 1616 aa10.69□□□□□ -0.7
PDLIM5-215ENST00000511586 CEP170BQ9Y4F5 1589 aaPredicted RBP10.69□□□□□ -0.7
PDLIM5-215ENST00000511586 EFCAB6Q5THR3 1501 aa10.69□□□□□ -0.7
PDLIM5-215ENST00000511586 RPRD2Q5VT52 1461 aaKnown RBP10.69□□□□□ -0.7
PDLIM5-215ENST00000511586 DMRT2Q9Y5R5 561 aa10.69□□□□□ -0.7
PDLIM5-215ENST00000511586 ACIN1Q9UKV3 1341 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-215ENST00000511586 TET3O43151 1660 aa10.68□□□□□ -0.7
PDLIM5-215ENST00000511586 IQGAP3Q86VI3 1631 aa10.68□□□□□ -0.7
PDLIM5-215ENST00000511586 NOS1P29475 1434 aa10.67□□□□□ -0.7
PDLIM5-215ENST00000511586 ZNF142P52746 1687 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-215ENST00000511586 IDI1Q13907 227 aa10.67□□□□□ -0.7
PDLIM5-215ENST00000511586 SLC52A1Q9NWF4 448 aa10.67□□□□□ -0.7
PDLIM5-215ENST00000511586 SETD5Q9C0A6 1442 aa10.67□□□□□ -0.7
PDLIM5-215ENST00000511586 CFAP65Q6ZU64 1925 aaKnown RBP10.66□□□□□ -0.7
PDLIM5-215ENST00000511586 NCKAP5LQ9HCH0 1330 aa10.66□□□□□ -0.7
PDLIM5-215ENST00000511586 UGGT1Q9NYU2 1555 aa10.66□□□□□ -0.7
PDLIM5-215ENST00000511586 PKD2Q13563 968 aa10.66□□□□□ -0.7
PDLIM5-215ENST00000511586 SLC4A1APQ9BWU0 796 aaKnown RBP10.66□□□□□ -0.7
PDLIM5-215ENST00000511586 STAG3Q9UJ98 1225 aa10.66□□□□□ -0.7
PDLIM5-215ENST00000511586 PLA2R1Q13018 1463 aa10.66□□□□□ -0.7
PDLIM5-215ENST00000511586 ANKLE2Q86XL3 938 aa10.65□□□□□ -0.7
PDLIM5-215ENST00000511586 E9PCH4 1651 aa10.63□□□□□ -0.71
PDLIM5-215ENST00000511586 STRCQ7RTU9 1775 aa10.63□□□□□ -0.71
PDLIM5-215ENST00000511586 PTPRTO14522 1441 aa10.63□□□□□ -0.71
PDLIM5-215ENST00000511586 SYNMO15061 1565 aa10.63□□□□□ -0.71
PDLIM5-215ENST00000511586 RAB3GAP2Q9H2M9 1393 aa10.63□□□□□ -0.71
PDLIM5-215ENST00000511586 HRCP23327 699 aa10.62□□□□□ -0.71
PDLIM5-215ENST00000511586 MPHOSPH9Q99550 1183 aa10.62□□□□□ -0.71
PDLIM5-215ENST00000511586 CHGAP10645 457 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-215ENST00000511586 EID1Q9Y6B2 187 aa10.61□□□□□ -0.71
PDLIM5-215ENST00000511586 PIK3C2BO00750 1634 aa10.6□□□□□ -0.71
PDLIM5-215ENST00000511586 TXNDC2Q86VQ3 553 aa10.6□□□□□ -0.71
PDLIM5-215ENST00000511586 UBR1Q8IWV7 1749 aa10.6□□□□□ -0.71
PDLIM5-215ENST00000511586 TMEM2Q9UHN6 1383 aa10.6□□□□□ -0.71
PDLIM5-215ENST00000511586 HDGFP51858 240 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-215ENST00000511586 KDM5AP29375 1690 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-215ENST00000511586 ARHGAP23Q9P227 1491 aa10.58□□□□□ -0.72
PDLIM5-215ENST00000511586 LTKP29376 864 aa10.58□□□□□ -0.72
PDLIM5-215ENST00000511586 FOXD1Q16676 465 aa10.58□□□□□ -0.72
PDLIM5-215ENST00000511586 ADGRB3O60242 1522 aa10.58□□□□□ -0.72
PDLIM5-215ENST00000511586 SLIT1O75093 1534 aa10.58□□□□□ -0.72
PDLIM5-215ENST00000511586 MED14O60244 1454 aa10.57□□□□□ -0.72
PDLIM5-215ENST00000511586 SCAF11Q99590 1463 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-215ENST00000511586 TRIM26Q12899 539 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-215ENST00000511586 NPHP4O75161 1426 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-215ENST00000511586 SPHKAPQ2M3C7 1700 aa10.56□□□□□ -0.72
PDLIM5-215ENST00000511586 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.56□□□□□ -0.72
PDLIM5-215ENST00000511586 TMEM131LA2VDJ0 1609 aa10.55□□□□□ -0.72
PDLIM5-215ENST00000511586 TRPM2O94759 1503 aa10.55□□□□□ -0.72
PDLIM5-215ENST00000511586 PPP1R15AO75807 674 aaPredicted RBP10.55□□□□□ -0.72
PDLIM5-215ENST00000511586 NEURL4Q96JN8 1562 aa10.55□□□□□ -0.72
PDLIM5-215ENST00000511586 POLR1AO95602 1720 aaPredicted RBP10.55□□□□□ -0.72
PDLIM5-215ENST00000511586 ZNF326Q5BKZ1 582 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-215ENST00000511586 RIMS2Q9UQ26 1411 aa10.54□□□□□ -0.72
PDLIM5-215ENST00000511586 ZNF335Q9H4Z2 1342 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms