RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 KIF3BO15066 747 aa18.63■□□□□ 0.57
HMGB2-205ENST00000511316 GGT6Q6P531 493 aa18.63■□□□□ 0.57
HMGB2-205ENST00000511316 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.63■□□□□ 0.579e-10■■■□□ 17.8
HMGB2-205ENST00000511316 RRP7BPQ9NSQ0 103 aa18.63■□□□□ 0.57
HMGB2-205ENST00000511316 CROCC2H7BZ55 1655 aa18.62■□□□□ 0.57
HMGB2-205ENST00000511316 RRBP1Q9P2E9 1410 aaKnown RBP18.61■□□□□ 0.57
HMGB2-205ENST00000511316 FER1L4A9Z1Z3 1794 aa18.61■□□□□ 0.57
HMGB2-205ENST00000511316 PPP6R1Q9UPN7 881 aa18.6■□□□□ 0.57
HMGB2-205ENST00000511316 KIF15Q9NS87 1388 aa18.59■□□□□ 0.57
HMGB2-205ENST00000511316 ADGRL2O95490 1459 aa18.58■□□□□ 0.57
HMGB2-205ENST00000511316 ZMYM3Q14202 1370 aa18.58■□□□□ 0.56
HMGB2-205ENST00000511316 DUOX2Q9NRD8 1548 aa18.56■□□□□ 0.56
HMGB2-205ENST00000511316 ANKRD30AQ9BXX3 1397 aa18.55■□□□□ 0.56
HMGB2-205ENST00000511316 PLPPR3Q6T4P5 718 aa18.55■□□□□ 0.56
HMGB2-205ENST00000511316 CNTLNQ9NXG0 1405 aa18.55■□□□□ 0.56
HMGB2-205ENST00000511316 MROH1Q8NDA8 1641 aa18.53■□□□□ 0.56
HMGB2-205ENST00000511316 C3P01024 1663 aa18.52■□□□□ 0.55
HMGB2-205ENST00000511316 ERBINQ96RT1 1412 aa18.52■□□□□ 0.55
HMGB2-205ENST00000511316 ROCK1Q13464 1354 aa18.51■□□□□ 0.55
HMGB2-205ENST00000511316 LMTK3Q96Q04 1460 aa18.51■□□□□ 0.55
HMGB2-205ENST00000511316 RNF17Q9BXT8 1623 aaKnown RBP18.51■□□□□ 0.55
HMGB2-205ENST00000511316 EIF2AK4Q9P2K8 1649 aaKnown RBP18.5■□□□□ 0.55
HMGB2-205ENST00000511316 MIER1Q8N108 512 aa18.5■□□□□ 0.55
HMGB2-205ENST00000511316 ESF1Q9H501 851 aaKnown RBP18.5■□□□□ 0.55
HMGB2-205ENST00000511316 WASHC2CQ9Y4E1 1318 aa18.49■□□□□ 0.55
HMGB2-205ENST00000511316 ITGAEP38570 1179 aa18.49■□□□□ 0.55
HMGB2-205ENST00000511316 CLTCQ00610 1675 aaKnown RBP18.49■□□□□ 0.55
HMGB2-205ENST00000511316 DHX57Q6P158 1386 aaKnown RBP18.49■□□□□ 0.55
HMGB2-205ENST00000511316 MROH2AA6NES4 1674 aa18.48■□□□□ 0.55
HMGB2-205ENST00000511316 FBXO31Q5XUX0 539 aaPredicted RBP18.47■□□□□ 0.55
HMGB2-205ENST00000511316 ANKRD50Q9ULJ7 1429 aa18.47■□□□□ 0.55
HMGB2-205ENST00000511316 SETD1BQ9UPS6 1966 aaKnown RBP18.47■□□□□ 0.55
HMGB2-205ENST00000511316 KDM5DQ9BY66 1539 aa18.46■□□□□ 0.55
HMGB2-205ENST00000511316 NPATQ14207 1427 aa18.45■□□□□ 0.54
HMGB2-205ENST00000511316 ABCC3O15438 1527 aa18.45■□□□□ 0.54
HMGB2-205ENST00000511316 FAM135AQ9P2D6 1515 aa18.44■□□□□ 0.54
HMGB2-205ENST00000511316 HSPA2P54652 639 aa18.44■□□□□ 0.54
HMGB2-205ENST00000511316 DEPDC5O75140 1603 aa18.43■□□□□ 0.54
HMGB2-205ENST00000511316 PRDM15P57071 1507 aaPredicted RBP18.43■□□□□ 0.54
HMGB2-205ENST00000511316 VWDEQ8N2E2 1590 aa18.43■□□□□ 0.54
HMGB2-205ENST00000511316 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.41■□□□□ 0.541e-11■■■■■ 44.5
HMGB2-205ENST00000511316 PZPP20742 1482 aa18.41■□□□□ 0.54
HMGB2-205ENST00000511316 NAIPQ13075 1403 aa18.39■□□□□ 0.53
HMGB2-205ENST00000511316 YTHDC1Q96MU7 727 aaKnown RBP18.38■□□□□ 0.53
HMGB2-205ENST00000511316 ARHGAP31Q2M1Z3 1444 aa18.38■□□□□ 0.53
HMGB2-205ENST00000511316 UHRF1BP1Q6BDS2 1440 aa18.37■□□□□ 0.53
HMGB2-205ENST00000511316 LMTK2Q8IWU2 1503 aa18.36■□□□□ 0.53
HMGB2-205ENST00000511316 PREX1Q8TCU6 1659 aa18.36■□□□□ 0.53
HMGB2-205ENST00000511316 CEP152O94986 1710 aa18.35■□□□□ 0.53
HMGB2-205ENST00000511316 ZC3H13Q5T200 1668 aaKnown RBP18.35■□□□□ 0.53
HMGB2-205ENST00000511316 HFM1A2PYH4 1435 aa18.33■□□□□ 0.53
HMGB2-205ENST00000511316 TNRQ92752 1358 aa18.33■□□□□ 0.52
HMGB2-205ENST00000511316 CAMSAP1Q5T5Y3 1602 aa18.32■□□□□ 0.52
HMGB2-205ENST00000511316 SPATA31D1Q6ZQQ2 1576 aa18.32■□□□□ 0.52
HMGB2-205ENST00000511316 ERVK-7P63135 1459 aa18.31■□□□□ 0.52
HMGB2-205ENST00000511316 KANK1Q14678 1352 aa18.31■□□□□ 0.52
HMGB2-205ENST00000511316 UNC13BO14795 1591 aa18.31■□□□□ 0.52
HMGB2-205ENST00000511316 TIMELESSQ9UNS1 1208 aa18.3■□□□□ 0.52
HMGB2-205ENST00000511316 NUP155O75694 1391 aa18.28■□□□□ 0.52
HMGB2-205ENST00000511316 MYO3AQ8NEV4 1616 aa18.28■□□□□ 0.52
HMGB2-205ENST00000511316 CFAP65Q6ZU64 1925 aaKnown RBP18.28■□□□□ 0.52
HMGB2-205ENST00000511316 STRCQ7RTU9 1775 aa18.28■□□□□ 0.52
HMGB2-205ENST00000511316 NOS1P29475 1434 aa18.27■□□□□ 0.52
HMGB2-205ENST00000511316 A2ML1A8K2U0 1454 aa18.27■□□□□ 0.51
HMGB2-205ENST00000511316 EFCAB6Q5THR3 1501 aa18.26■□□□□ 0.51
HMGB2-205ENST00000511316 CEP170BQ9Y4F5 1589 aaPredicted RBP18.26■□□□□ 0.51
HMGB2-205ENST00000511316 ZNF142P52746 1687 aaPredicted RBP18.25■□□□□ 0.51
HMGB2-205ENST00000511316 NLRP1Q9C000 1473 aa18.24■□□□□ 0.51
HMGB2-205ENST00000511316 IDI1Q13907 227 aa18.24■□□□□ 0.51
HMGB2-205ENST00000511316 IQGAP3Q86VI3 1631 aa18.24■□□□□ 0.51
HMGB2-205ENST00000511316 GCC2Q8IWJ2 1684 aa18.23■□□□□ 0.51
HMGB2-205ENST00000511316 RPRD2Q5VT52 1461 aaKnown RBP18.22■□□□□ 0.51
HMGB2-205ENST00000511316 TET3O43151 1660 aa18.21■□□□□ 0.51
HMGB2-205ENST00000511316 NCKAP5LQ9HCH0 1330 aa18.21■□□□□ 0.51
HMGB2-205ENST00000511316 SYNMO15061 1565 aa18.21■□□□□ 0.51
HMGB2-205ENST00000511316 PLA2R1Q13018 1463 aa18.2■□□□□ 0.5
HMGB2-205ENST00000511316 E9PCH4 1651 aa18.19■□□□□ 0.5
HMGB2-205ENST00000511316 THEMISQ8N1K5 641 aaPredicted RBP18.19■□□□□ 0.5
HMGB2-205ENST00000511316 SETD5Q9C0A6 1442 aa18.18■□□□□ 0.5
HMGB2-205ENST00000511316 UGGT1Q9NYU2 1555 aa18.18■□□□□ 0.5
HMGB2-205ENST00000511316 SLC52A1Q9NWF4 448 aa18.17■□□□□ 0.5
HMGB2-205ENST00000511316 PTPRTO14522 1441 aa18.15■□□□□ 0.5
HMGB2-205ENST00000511316 RAB3GAP2Q9H2M9 1393 aa18.15■□□□□ 0.5
HMGB2-205ENST00000511316 PKD2Q13563 968 aa18.15■□□□□ 0.5
HMGB2-205ENST00000511316 LTKP29376 864 aa18.14■□□□□ 0.49
HMGB2-205ENST00000511316 DMRT2Q9Y5R5 561 aa18.14■□□□□ 0.49
HMGB2-205ENST00000511316 UBR1Q8IWV7 1749 aa18.14■□□□□ 0.49
HMGB2-205ENST00000511316 TRIM52Q96A61 297 aa18.13■□□□□ 0.49
HMGB2-205ENST00000511316 ARHGAP23Q9P227 1491 aa18.12■□□□□ 0.49
HMGB2-205ENST00000511316 SUPT16HQ9Y5B9 1047 aaKnown RBP18.12■□□□□ 0.49
HMGB2-205ENST00000511316 PIK3C2BO00750 1634 aa18.12■□□□□ 0.49
HMGB2-205ENST00000511316 NEURL4Q96JN8 1562 aa18.11■□□□□ 0.49
HMGB2-205ENST00000511316 ANKLE2Q86XL3 938 aa18.11■□□□□ 0.49
HMGB2-205ENST00000511316 SLC4A1APQ9BWU0 796 aaKnown RBP18.1■□□□□ 0.49
HMGB2-205ENST00000511316 SLIT1O75093 1534 aa18.1■□□□□ 0.49
HMGB2-205ENST00000511316 MPHOSPH9Q99550 1183 aa18.09■□□□□ 0.49
HMGB2-205ENST00000511316 TMEM2Q9UHN6 1383 aa18.09■□□□□ 0.49
HMGB2-205ENST00000511316 MED14O60244 1454 aa18.09■□□□□ 0.49
HMGB2-205ENST00000511316 FOXD1Q16676 465 aa18.08■□□□□ 0.48
HMGB2-205ENST00000511316 KDM5AP29375 1690 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms