RNA–Protein interactions for RNA: ENST00000511023.1

COL12A1-210, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-210ENST00000511023 DUOX2Q9NRD8 1548 aa22.54■■□□□ 1.2
COL12A1-210ENST00000511023 PPARGC1BQ86YN6 1023 aaKnown RBP22.54■■□□□ 1.2
COL12A1-210ENST00000511023 KIF15Q9NS87 1388 aa22.53■■□□□ 1.2
COL12A1-210ENST00000511023 KDM5DQ9BY66 1539 aa22.53■■□□□ 1.2
COL12A1-210ENST00000511023 EIF2AK4Q9P2K8 1649 aaKnown RBP22.53■■□□□ 1.2
COL12A1-210ENST00000511023 RRP7BPQ9NSQ0 103 aa22.52■■□□□ 1.2
COL12A1-210ENST00000511023 FAM135AQ9P2D6 1515 aa22.52■■□□□ 1.19
COL12A1-210ENST00000511023 MROH1Q8NDA8 1641 aa22.51■■□□□ 1.19
COL12A1-210ENST00000511023 FAM50AQ14320 339 aaKnown RBP22.51■■□□□ 1.19
COL12A1-210ENST00000511023 CHIC2Q9UKJ5 165 aa22.51■■□□□ 1.19
COL12A1-210ENST00000511023 WASHC2CQ9Y4E1 1318 aa22.5■■□□□ 1.19
COL12A1-210ENST00000511023 NCOA1Q15788 1441 aa22.47■■□□□ 1.19
COL12A1-210ENST00000511023 ABCC3O15438 1527 aa22.47■■□□□ 1.19
COL12A1-210ENST00000511023 STRCQ7RTU9 1775 aa22.46■■□□□ 1.19
COL12A1-210ENST00000511023 FBXO31Q5XUX0 539 aaPredicted RBP22.46■■□□□ 1.19
COL12A1-210ENST00000511023 ANKRD30AQ9BXX3 1397 aa22.46■■□□□ 1.19
COL12A1-210ENST00000511023 ERBINQ96RT1 1412 aa22.46■■□□□ 1.19
COL12A1-210ENST00000511023 ADGRL2O95490 1459 aa22.46■■□□□ 1.19
COL12A1-210ENST00000511023 PZPP20742 1482 aa22.46■■□□□ 1.19
COL12A1-210ENST00000511023 MYO3AQ8NEV4 1616 aa22.46■■□□□ 1.19
COL12A1-210ENST00000511023 ZNF142P52746 1687 aaPredicted RBP22.42■■□□□ 1.18
COL12A1-210ENST00000511023 ZC3H13Q5T200 1668 aaKnown RBP22.42■■□□□ 1.18
COL12A1-210ENST00000511023 PRDM15P57071 1507 aaPredicted RBP22.41■■□□□ 1.18
COL12A1-210ENST00000511023 CEP152O94986 1710 aa22.4■■□□□ 1.18
COL12A1-210ENST00000511023 DEPDC5O75140 1603 aa22.4■■□□□ 1.18
COL12A1-210ENST00000511023 CEP170BQ9Y4F5 1589 aaPredicted RBP22.4■■□□□ 1.18
COL12A1-210ENST00000511023 TNRQ92752 1358 aa22.39■■□□□ 1.18
COL12A1-210ENST00000511023 CAMSAP1Q5T5Y3 1602 aa22.38■■□□□ 1.17
COL12A1-210ENST00000511023 A2ML1A8K2U0 1454 aa22.35■■□□□ 1.17
COL12A1-210ENST00000511023 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.35■■□□□ 1.17
COL12A1-210ENST00000511023 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.34■■□□□ 1.17
COL12A1-210ENST00000511023 SPATA31D1Q6ZQQ2 1576 aa22.33■■□□□ 1.16
COL12A1-210ENST00000511023 VWDEQ8N2E2 1590 aa22.33■■□□□ 1.16
COL12A1-210ENST00000511023 ANKRD50Q9ULJ7 1429 aa22.32■■□□□ 1.16
COL12A1-210ENST00000511023 ERVK-7P63135 1459 aa22.32■■□□□ 1.16
COL12A1-210ENST00000511023 DMRT2Q9Y5R5 561 aa22.31■■□□□ 1.16
COL12A1-210ENST00000511023 PTPRTO14522 1441 aa22.31■■□□□ 1.16
COL12A1-210ENST00000511023 PLA2R1Q13018 1463 aa22.3■■□□□ 1.16
COL12A1-210ENST00000511023 ROCK1Q13464 1354 aa22.3■■□□□ 1.16
COL12A1-210ENST00000511023 ILDR1Q86SU0 546 aaPredicted RBP22.3■■□□□ 1.16
COL12A1-210ENST00000511023 ARHGAP31Q2M1Z3 1444 aa22.3■■□□□ 1.16
COL12A1-210ENST00000511023 RRBP1Q9P2E9 1410 aaKnown RBP22.3■■□□□ 1.16
COL12A1-210ENST00000511023 NCKAP5LQ9HCH0 1330 aa22.3■■□□□ 1.16
COL12A1-210ENST00000511023 ITGAEP38570 1179 aa22.29■■□□□ 1.16
COL12A1-210ENST00000511023 NLRP1Q9C000 1473 aa22.28■■□□□ 1.16
COL12A1-210ENST00000511023 KANK1Q14678 1352 aa22.28■■□□□ 1.16
COL12A1-210ENST00000511023 LMTK2Q8IWU2 1503 aa22.28■■□□□ 1.16
COL12A1-210ENST00000511023 CFAP65Q6ZU64 1925 aaKnown RBP22.27■■□□□ 1.16
COL12A1-210ENST00000511023 PKD2Q13563 968 aa22.23■■□□□ 1.15
COL12A1-210ENST00000511023 UGGT1Q9NYU2 1555 aa22.23■■□□□ 1.15
COL12A1-210ENST00000511023 EFCAB6Q5THR3 1501 aa22.21■■□□□ 1.15
COL12A1-210ENST00000511023 UNC13BO14795 1591 aa22.21■■□□□ 1.15
COL12A1-210ENST00000511023 CERKQ8TCT0 537 aa22.19■■□□□ 1.14
COL12A1-210ENST00000511023 NEURL4Q96JN8 1562 aa22.18■■□□□ 1.14
COL12A1-210ENST00000511023 THEMISQ8N1K5 641 aaPredicted RBP22.18■■□□□ 1.14
COL12A1-210ENST00000511023 POLR1AO95602 1720 aaPredicted RBP22.16■■□□□ 1.14
COL12A1-210ENST00000511023 UBR1Q8IWV7 1749 aa22.16■■□□□ 1.14
COL12A1-210ENST00000511023 LTBP4Q8N2S1 1624 aa22.16■■□□□ 1.14
COL12A1-210ENST00000511023 NOS1P29475 1434 aa22.15■■□□□ 1.14
COL12A1-210ENST00000511023 FBXO41Q8TF61 875 aa22.15■■□□□ 1.14
COL12A1-210ENST00000511023 SYNMO15061 1565 aa22.15■■□□□ 1.14
COL12A1-210ENST00000511023 TET3O43151 1660 aa22.14■■□□□ 1.14
COL12A1-210ENST00000511023 PIK3C2BO00750 1634 aa22.13■■□□□ 1.13
COL12A1-210ENST00000511023 ANKLE2Q86XL3 938 aa22.12■■□□□ 1.13
COL12A1-210ENST00000511023 IQGAP3Q86VI3 1631 aa22.12■■□□□ 1.13
COL12A1-210ENST00000511023 RPRD2Q5VT52 1461 aaKnown RBP22.11■■□□□ 1.13
COL12A1-210ENST00000511023 GCC2Q8IWJ2 1684 aa22.11■■□□□ 1.13
COL12A1-210ENST00000511023 ZNF335Q9H4Z2 1342 aaPredicted RBP22.1■■□□□ 1.13
COL12A1-210ENST00000511023 IDI1Q13907 227 aa22.1■■□□□ 1.13
COL12A1-210ENST00000511023 MED14O60244 1454 aa22.09■■□□□ 1.13
COL12A1-210ENST00000511023 NAIPQ13075 1403 aa22.09■■□□□ 1.13
COL12A1-210ENST00000511023 NUP155O75694 1391 aa22.09■■□□□ 1.13
COL12A1-210ENST00000511023 ARHGAP23Q9P227 1491 aa22.08■■□□□ 1.12
COL12A1-210ENST00000511023 NPHP4O75161 1426 aaPredicted RBP22.07■■□□□ 1.12
COL12A1-210ENST00000511023 E9PCH4 1651 aa22.07■■□□□ 1.12
COL12A1-210ENST00000511023 SLIT1O75093 1534 aa22.06■■□□□ 1.12
COL12A1-210ENST00000511023 KDM5AP29375 1690 aaKnown RBP22.04■■□□□ 1.12
COL12A1-210ENST00000511023 LTKP29376 864 aa22.04■■□□□ 1.12
COL12A1-210ENST00000511023 SLC52A1Q9NWF4 448 aa22.03■■□□□ 1.12
COL12A1-210ENST00000511023 IQGAP1P46940 1657 aa22.03■■□□□ 1.12
COL12A1-210ENST00000511023 SCAF11Q99590 1463 aaKnown RBP22.03■■□□□ 1.12
COL12A1-210ENST00000511023 TMEM2Q9UHN6 1383 aa22.02■■□□□ 1.12
COL12A1-210ENST00000511023 ADGRB3O60242 1522 aa22.02■■□□□ 1.12
COL12A1-210ENST00000511023 HFM1A2PYH4 1435 aa22.02■■□□□ 1.12
COL12A1-210ENST00000511023 TXNDC2Q86VQ3 553 aa22■■□□□ 1.11
COL12A1-210ENST00000511023 STAG3Q9UJ98 1225 aa22■■□□□ 1.11
COL12A1-210ENST00000511023 IQSEC2Q5JU85 1478 aa21.97■■□□□ 1.11
COL12A1-210ENST00000511023 TMEM131LA2VDJ0 1609 aa21.95■■□□□ 1.1
COL12A1-210ENST00000511023 MYO5BQ9ULV0 1848 aa21.95■■□□□ 1.1
COL12A1-210ENST00000511023 EID1Q9Y6B2 187 aa21.95■■□□□ 1.1
COL12A1-210ENST00000511023 STRCP1A6NGW2 1772 aa21.92■■□□□ 1.1
COL12A1-210ENST00000511023 CPS1P31327 1500 aa21.91■■□□□ 1.1
COL12A1-210ENST00000511023 ZFYVE9O95405 1425 aa21.91■■□□□ 1.1
COL12A1-210ENST00000511023 SPHKAPQ2M3C7 1700 aa21.9■■□□□ 1.1
COL12A1-210ENST00000511023 TRIM52Q96A61 297 aa21.88■■□□□ 1.09
COL12A1-210ENST00000511023 RIMS2Q9UQ26 1411 aa21.88■■□□□ 1.09
COL12A1-210ENST00000511023 CHGAP10645 457 aaKnown RBP21.87■■□□□ 1.09
COL12A1-210ENST00000511023 SLC26A8Q96RN1 970 aa21.83■■□□□ 1.09
COL12A1-210ENST00000511023 TRPM2O94759 1503 aa21.83■■□□□ 1.09
COL12A1-210ENST00000511023 LRRC7Q96NW7 1537 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms