RNA–Protein interactions for RNA: ENST00000509977.1

RETREG1-205, Transcript of reticulophagy regulator 1, humanhuman

TSL 5

Gene RETREG1, Length 640 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-205ENST00000509977 AFAP1Q8N556 730 aa11.52□□□□□ -0.57
RETREG1-205ENST00000509977 INO80Q9ULG1 1556 aaPredicted RBP11.52□□□□□ -0.57
RETREG1-205ENST00000509977 PLSCR2Q9NRY7 297 aa11.51□□□□□ -0.57
RETREG1-205ENST00000509977 PLEKHH2Q8IVE3 1493 aa11.51□□□□□ -0.57
RETREG1-205ENST00000509977 LMTK3Q96Q04 1460 aa11.51□□□□□ -0.57
RETREG1-205ENST00000509977 CHADLQ6NUI6 762 aa11.5□□□□□ -0.57
RETREG1-205ENST00000509977 MTUS2Q5JR59 1369 aa11.5□□□□□ -0.57
RETREG1-205ENST00000509977 VPS8Q8N3P4 1428 aa11.5□□□□□ -0.57
RETREG1-205ENST00000509977 MAP3K1Q13233 1512 aa11.5□□□□□ -0.57
RETREG1-205ENST00000509977 ARID4BQ4LE39 1312 aaPredicted RBP11.49□□□□□ -0.57
RETREG1-205ENST00000509977 PLXNC1O60486 1568 aa11.49□□□□□ -0.57
RETREG1-205ENST00000509977 SUPT6HQ7KZ85 1726 aaKnown RBP11.49□□□□□ -0.57
RETREG1-205ENST00000509977 MBD5Q9P267 1494 aa11.48□□□□□ -0.57
RETREG1-205ENST00000509977 ATP7AQ04656 1500 aa11.47□□□□□ -0.57
RETREG1-205ENST00000509977 CCNB3Q8WWL7 1395 aa11.47□□□□□ -0.57
RETREG1-205ENST00000509977 NCOA2Q15596 1464 aa11.45□□□□□ -0.58
RETREG1-205ENST00000509977 LOC105371045A0A1W2PR82 267 aa11.45□□□□□ -0.58
RETREG1-205ENST00000509977 LRRC9Q6ZRR7 1453 aa11.44□□□□□ -0.58
RETREG1-205ENST00000509977 MROH2AA6NES4 1674 aa11.44□□□□□ -0.58
RETREG1-205ENST00000509977 C3P01024 1663 aa11.44□□□□□ -0.58
RETREG1-205ENST00000509977 ADGBQ8N7X0 1667 aa11.44□□□□□ -0.58
RETREG1-205ENST00000509977 PREX1Q8TCU6 1659 aa11.44□□□□□ -0.58
RETREG1-205ENST00000509977 CFDP1Q9UEE9 299 aaPredicted RBP11.44□□□□□ -0.58
RETREG1-205ENST00000509977 RTEL1-TNFRSF6BF6WH68 1400 aa11.43□□□□□ -0.58
RETREG1-205ENST00000509977 ARHGEF5Q12774 1597 aa11.41□□□□□ -0.58
RETREG1-205ENST00000509977 CAMSAP2Q08AD1 1489 aa11.41□□□□□ -0.58
RETREG1-205ENST00000509977 HAX1O00165 279 aa11.41□□□□□ -0.58
RETREG1-205ENST00000509977 HNRNPMP52272 730 aaKnown RBP eCLIP11.41□□□□□ -0.58
RETREG1-205ENST00000509977 SPAG9O60271 1321 aaKnown RBP11.4□□□□□ -0.58
RETREG1-205ENST00000509977 ZNF644Q9H582 1327 aaPredicted RBP11.4□□□□□ -0.58
RETREG1-205ENST00000509977 A2MP01023 1474 aa11.4□□□□□ -0.58
RETREG1-205ENST00000509977 ZNF777Q9ULD5 760 aaPredicted RBP11.4□□□□□ -0.58
RETREG1-205ENST00000509977 CNTLNQ9NXG0 1405 aa11.4□□□□□ -0.58
RETREG1-205ENST00000509977 SETD1BQ9UPS6 1966 aaKnown RBP11.39□□□□□ -0.59
RETREG1-205ENST00000509977 CCDC141Q6ZP82 1450 aa11.39□□□□□ -0.59
RETREG1-205ENST00000509977 MLECQ14165 292 aa11.39□□□□□ -0.59
RETREG1-205ENST00000509977 MAST1Q9Y2H9 1570 aa11.38□□□□□ -0.59
RETREG1-205ENST00000509977 CREBZFQ9NS37 354 aa11.38□□□□□ -0.59
RETREG1-205ENST00000509977 STRCQ7RTU9 1775 aa11.36□□□□□ -0.59
RETREG1-205ENST00000509977 NPATQ14207 1427 aa11.36□□□□□ -0.59
RETREG1-205ENST00000509977 MIA2Q96PC5 1412 aa11.36□□□□□ -0.59
RETREG1-205ENST00000509977 FAM135AQ9P2D6 1515 aa11.36□□□□□ -0.59
RETREG1-205ENST00000509977 KANK4Q5T7N3 995 aaPredicted RBP11.35□□□□□ -0.59
RETREG1-205ENST00000509977 RSPH4AQ5TD94 716 aa11.35□□□□□ -0.59
RETREG1-205ENST00000509977 FARP1Q9Y4F1 1045 aaPredicted RBP11.35□□□□□ -0.59
RETREG1-205ENST00000509977 CLTCQ00610 1675 aaKnown RBP11.35□□□□□ -0.59
RETREG1-205ENST00000509977 MYOM3Q5VTT5 1437 aa11.35□□□□□ -0.59
RETREG1-205ENST00000509977 DHX29Q7Z478 1369 aaKnown RBP11.34□□□□□ -0.59
RETREG1-205ENST00000509977 CEBPAP49715 358 aaPredicted RBP11.34□□□□□ -0.59
RETREG1-205ENST00000509977 MYT1LQ9UL68 1186 aa11.34□□□□□ -0.59
RETREG1-205ENST00000509977 ZNF142P52746 1687 aaPredicted RBP11.33□□□□□ -0.6
RETREG1-205ENST00000509977 UHRF1BP1Q6BDS2 1440 aa11.33□□□□□ -0.6
RETREG1-205ENST00000509977 RNF17Q9BXT8 1623 aaKnown RBP11.32□□□□□ -0.6
RETREG1-205ENST00000509977 HSPA2P54652 639 aa11.32□□□□□ -0.6
RETREG1-205ENST00000509977 CROCC2H7BZ55 1655 aa11.32□□□□□ -0.6
RETREG1-205ENST00000509977 EIF2AK4Q9P2K8 1649 aaKnown RBP11.31□□□□□ -0.6
RETREG1-205ENST00000509977 ZMYM3Q14202 1370 aa11.31□□□□□ -0.6
RETREG1-205ENST00000509977 PTPRKQ15262 1439 aa11.31□□□□□ -0.6
RETREG1-205ENST00000509977 MYO3AQ8NEV4 1616 aa11.31□□□□□ -0.6
RETREG1-205ENST00000509977 TCOF1Q13428 1488 aaKnown RBP11.3□□□□□ -0.6
RETREG1-205ENST00000509977 MROH1Q8NDA8 1641 aa11.29□□□□□ -0.6
RETREG1-205ENST00000509977 PTPN23Q9H3S7 1636 aa11.29□□□□□ -0.6
RETREG1-205ENST00000509977 ILDR1Q86SU0 546 aaPredicted RBP11.29□□□□□ -0.6
RETREG1-205ENST00000509977 SHANK2Q9UPX8 1470 aa11.29□□□□□ -0.6
RETREG1-205ENST00000509977 KDM5DQ9BY66 1539 aa11.29□□□□□ -0.6
RETREG1-205ENST00000509977 C19orf67A6NJJ6 358 aa11.28□□□□□ -0.6
RETREG1-205ENST00000509977 EVX2Q03828 476 aa11.28□□□□□ -0.6
RETREG1-205ENST00000509977 DNMT1P26358 1616 aaKnown RBP11.27□□□□□ -0.6
RETREG1-205ENST00000509977 NCOA1Q15788 1441 aa11.27□□□□□ -0.6
RETREG1-205ENST00000509977 ZC3H13Q5T200 1668 aaKnown RBP11.27□□□□□ -0.6
RETREG1-205ENST00000509977 PTPRTO14522 1441 aa11.26□□□□□ -0.61
RETREG1-205ENST00000509977 PZPP20742 1482 aa11.26□□□□□ -0.61
RETREG1-205ENST00000509977 CEP170BQ9Y4F5 1589 aaPredicted RBP11.26□□□□□ -0.61
RETREG1-205ENST00000509977 ESF1Q9H501 851 aaKnown RBP11.26□□□□□ -0.61
RETREG1-205ENST00000509977 ABCC5O15440 1437 aa11.26□□□□□ -0.61
RETREG1-205ENST00000509977 FGD6Q6ZV73 1430 aa11.26□□□□□ -0.61
RETREG1-205ENST00000509977 PLA2R1Q13018 1463 aa11.25□□□□□ -0.61
RETREG1-205ENST00000509977 DUOX2Q9NRD8 1548 aa11.25□□□□□ -0.61
RETREG1-205ENST00000509977 DEPDC5O75140 1603 aa11.24□□□□□ -0.61
RETREG1-205ENST00000509977 CAMSAP1Q5T5Y3 1602 aa11.24□□□□□ -0.61
RETREG1-205ENST00000509977 TSPY4P0CV99 314 aa11.24□□□□□ -0.61
RETREG1-205ENST00000509977 TSPY10P0CW01 314 aa11.24□□□□□ -0.61
RETREG1-205ENST00000509977 GGT6Q6P531 493 aa11.24□□□□□ -0.61
RETREG1-205ENST00000509977 MIER1Q8N108 512 aa11.24□□□□□ -0.61
RETREG1-205ENST00000509977 PRDM15P57071 1507 aaPredicted RBP11.24□□□□□ -0.61
RETREG1-205ENST00000509977 MNX1P50219 401 aaPredicted RBP11.23□□□□□ -0.61
RETREG1-205ENST00000509977 DAPK1P53355 1430 aa11.23□□□□□ -0.61
RETREG1-205ENST00000509977 ABCC3O15438 1527 aa11.23□□□□□ -0.61
RETREG1-205ENST00000509977 A2ML1A8K2U0 1454 aa11.22□□□□□ -0.61
RETREG1-205ENST00000509977 KIF3BO15066 747 aa11.22□□□□□ -0.61
RETREG1-205ENST00000509977 SPATA31D1Q6ZQQ2 1576 aa11.22□□□□□ -0.61
RETREG1-205ENST00000509977 FBXO41Q8TF61 875 aa11.22□□□□□ -0.61
RETREG1-205ENST00000509977 FBXO3Q9UK99 471 aa11.22□□□□□ -0.61
RETREG1-205ENST00000509977 LTBP4Q8N2S1 1624 aa11.21□□□□□ -0.61
RETREG1-205ENST00000509977 ERBINQ96RT1 1412 aa11.21□□□□□ -0.61
RETREG1-205ENST00000509977 PLEKHG5O94827 1062 aa11.21□□□□□ -0.61
RETREG1-205ENST00000509977 CD44P16070 742 aaKnown RBP11.21□□□□□ -0.61
RETREG1-205ENST00000509977 ADGRL2O95490 1459 aa11.2□□□□□ -0.62
RETREG1-205ENST00000509977 CEP152O94986 1710 aa11.2□□□□□ -0.62
RETREG1-205ENST00000509977 VWDEQ8N2E2 1590 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms