RNA–Protein interactions for RNA: ENST00000509354.1

TRIO-213, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-213ENST00000509354 ZNF644Q9H582 1327 aaPredicted RBP11.43□□□□□ -0.58
TRIO-213ENST00000509354 MLECQ14165 292 aa11.43□□□□□ -0.58
TRIO-213ENST00000509354 PLEKHH2Q8IVE3 1493 aa11.43□□□□□ -0.58
TRIO-213ENST00000509354 MAP3K1Q13233 1512 aa11.42□□□□□ -0.58
TRIO-213ENST00000509354 HNRNPMP52272 730 aaKnown RBP eCLIP11.42□□□□□ -0.582e-6■■■■□ 21.3
TRIO-213ENST00000509354 CFDP1Q9UEE9 299 aaPredicted RBP11.42□□□□□ -0.58
TRIO-213ENST00000509354 MYT1LQ9UL68 1186 aa11.42□□□□□ -0.58
TRIO-213ENST00000509354 PLXNC1O60486 1568 aa11.41□□□□□ -0.58
TRIO-213ENST00000509354 C3P01024 1663 aa11.41□□□□□ -0.58
TRIO-213ENST00000509354 KIAA1107Q9UPP5 1409 aa11.41□□□□□ -0.58
TRIO-213ENST00000509354 AGLP35573 1532 aa11.4□□□□□ -0.58
TRIO-213ENST00000509354 MBD5Q9P267 1494 aa11.4□□□□□ -0.58
TRIO-213ENST00000509354 KANK4Q5T7N3 995 aaPredicted RBP11.39□□□□□ -0.59
TRIO-213ENST00000509354 SPAG9O60271 1321 aaKnown RBP11.38□□□□□ -0.59
TRIO-213ENST00000509354 ARHGEF5Q12774 1597 aa11.38□□□□□ -0.59
TRIO-213ENST00000509354 PREX1Q8TCU6 1659 aa11.38□□□□□ -0.59
TRIO-213ENST00000509354 CCDC141Q6ZP82 1450 aa11.38□□□□□ -0.59
TRIO-213ENST00000509354 LMTK3Q96Q04 1460 aa11.38□□□□□ -0.59
TRIO-213ENST00000509354 CROCC2H7BZ55 1655 aa11.37□□□□□ -0.59
TRIO-213ENST00000509354 CLTCQ00610 1675 aaKnown RBP11.37□□□□□ -0.59
TRIO-213ENST00000509354 MROH2AA6NES4 1674 aa11.36□□□□□ -0.59
TRIO-213ENST00000509354 STAG3Q9UJ98 1225 aa11.36□□□□□ -0.59
TRIO-213ENST00000509354 A2MP01023 1474 aa11.36□□□□□ -0.59
TRIO-213ENST00000509354 MYOM3Q5VTT5 1437 aa11.35□□□□□ -0.59
TRIO-213ENST00000509354 AKT1S1Q96B36 256 aa11.34□□□□□ -0.59
TRIO-213ENST00000509354 PTPN23Q9H3S7 1636 aa11.34□□□□□ -0.59
TRIO-213ENST00000509354 MAST1Q9Y2H9 1570 aa11.33□□□□□ -0.6
TRIO-213ENST00000509354 SETD1BQ9UPS6 1966 aaKnown RBP11.32□□□□□ -0.6
TRIO-213ENST00000509354 CEBPAP49715 358 aaPredicted RBP11.31□□□□□ -0.6
TRIO-213ENST00000509354 RTEL1-TNFRSF6BF6WH68 1400 aa11.31□□□□□ -0.6
TRIO-213ENST00000509354 DNMT1P26358 1616 aaKnown RBP11.3□□□□□ -0.6
TRIO-213ENST00000509354 MIA2Q96PC5 1412 aa11.29□□□□□ -0.6
TRIO-213ENST00000509354 RNF17Q9BXT8 1623 aaKnown RBP11.28□□□□□ -0.6
TRIO-213ENST00000509354 FGD6Q6ZV73 1430 aa11.28□□□□□ -0.6
TRIO-213ENST00000509354 HSPA2P54652 639 aa11.28□□□□□ -0.6
TRIO-213ENST00000509354 CEP152O94986 1710 aa11.28□□□□□ -0.6
TRIO-213ENST00000509354 STRCQ7RTU9 1775 aa11.28□□□□□ -0.6
TRIO-213ENST00000509354 MYO3AQ8NEV4 1616 aa11.27□□□□□ -0.6
TRIO-213ENST00000509354 CNTLNQ9NXG0 1405 aa11.27□□□□□ -0.6
TRIO-213ENST00000509354 EIF2AK4Q9P2K8 1649 aaKnown RBP11.27□□□□□ -0.61
TRIO-213ENST00000509354 ZNF142P52746 1687 aaPredicted RBP11.27□□□□□ -0.61
TRIO-213ENST00000509354 TCOF1Q13428 1488 aaKnown RBP11.26□□□□□ -0.61
TRIO-213ENST00000509354 MROH1Q8NDA8 1641 aa11.26□□□□□ -0.61
TRIO-213ENST00000509354 DHX29Q7Z478 1369 aaKnown RBP11.26□□□□□ -0.61
TRIO-213ENST00000509354 VASPP50552 380 aaPredicted RBP11.25□□□□□ -0.61
TRIO-213ENST00000509354 SPDYE1Q8NFV5 336 aaPredicted RBP11.25□□□□□ -0.61
TRIO-213ENST00000509354 UHRF1BP1Q6BDS2 1440 aa11.25□□□□□ -0.61
TRIO-213ENST00000509354 CFAP65Q6ZU64 1925 aaKnown RBP11.25□□□□□ -0.61
TRIO-213ENST00000509354 SHANK2Q9UPX8 1470 aa11.25□□□□□ -0.61
TRIO-213ENST00000509354 KDM5DQ9BY66 1539 aa11.25□□□□□ -0.61
TRIO-213ENST00000509354 GGT6Q6P531 493 aa11.24□□□□□ -0.61
TRIO-213ENST00000509354 ABCC5O15440 1437 aa11.24□□□□□ -0.61
TRIO-213ENST00000509354 ZC3H13Q5T200 1668 aaKnown RBP11.24□□□□□ -0.61
TRIO-213ENST00000509354 PLEKHG5O94827 1062 aa11.23□□□□□ -0.61
TRIO-213ENST00000509354 ESF1Q9H501 851 aaKnown RBP11.23□□□□□ -0.61
TRIO-213ENST00000509354 DAPK1P53355 1430 aa11.23□□□□□ -0.61
TRIO-213ENST00000509354 CAMSAP1Q5T5Y3 1602 aa11.21□□□□□ -0.61
TRIO-213ENST00000509354 CEP170BQ9Y4F5 1589 aaPredicted RBP11.21□□□□□ -0.61
TRIO-213ENST00000509354 DUOX2Q9NRD8 1548 aa11.21□□□□□ -0.61
TRIO-213ENST00000509354 FAM135AQ9P2D6 1515 aa11.21□□□□□ -0.61
TRIO-213ENST00000509354 NPATQ14207 1427 aa11.21□□□□□ -0.61
TRIO-213ENST00000509354 PTPRKQ15262 1439 aa11.21□□□□□ -0.61
TRIO-213ENST00000509354 ZMYM3Q14202 1370 aa11.21□□□□□ -0.61
TRIO-213ENST00000509354 KIF3BO15066 747 aa11.21□□□□□ -0.61
TRIO-213ENST00000509354 AMER1Q5JTC6 1135 aaPredicted RBP11.21□□□□□ -0.61
TRIO-213ENST00000509354 RSPH4AQ5TD94 716 aa11.21□□□□□ -0.61
TRIO-213ENST00000509354 DEPDC5O75140 1603 aa11.2□□□□□ -0.62
TRIO-213ENST00000509354 ABCC3O15438 1527 aa11.2□□□□□ -0.62
TRIO-213ENST00000509354 TSPY4P0CV99 314 aa11.2□□□□□ -0.62
TRIO-213ENST00000509354 TSPY10P0CW01 314 aa11.2□□□□□ -0.62
TRIO-213ENST00000509354 TRIM26Q12899 539 aaPredicted RBP11.2□□□□□ -0.62
TRIO-213ENST00000509354 KIF15Q9NS87 1388 aa11.19□□□□□ -0.62
TRIO-213ENST00000509354 PRDM15P57071 1507 aaPredicted RBP11.19□□□□□ -0.62
TRIO-213ENST00000509354 PPARGC1BQ86YN6 1023 aaKnown RBP11.18□□□□□ -0.62
TRIO-213ENST00000509354 PZPP20742 1482 aa11.18□□□□□ -0.62
TRIO-213ENST00000509354 POLR1AO95602 1720 aaPredicted RBP11.18□□□□□ -0.62
TRIO-213ENST00000509354 PLCD3Q8N3E9 789 aa11.16□□□□□ -0.62
TRIO-213ENST00000509354 ADGRL2O95490 1459 aa11.16□□□□□ -0.62
TRIO-213ENST00000509354 NCOA1Q15788 1441 aa11.16□□□□□ -0.62
TRIO-213ENST00000509354 ERBINQ96RT1 1412 aa11.16□□□□□ -0.62
TRIO-213ENST00000509354 FAM50AQ14320 339 aaKnown RBP11.15□□□□□ -0.62
TRIO-213ENST00000509354 REM2Q8IYK8 340 aaPredicted RBP11.15□□□□□ -0.62
TRIO-213ENST00000509354 RRP7BPQ9NSQ0 103 aa11.15□□□□□ -0.62
TRIO-213ENST00000509354 CHIC2Q9UKJ5 165 aa11.15□□□□□ -0.62
TRIO-213ENST00000509354 TNRQ92752 1358 aa11.14□□□□□ -0.63
TRIO-213ENST00000509354 A2ML1A8K2U0 1454 aa11.13□□□□□ -0.63
TRIO-213ENST00000509354 WASHC2CQ9Y4E1 1318 aa11.13□□□□□ -0.63
TRIO-213ENST00000509354 SPATA31D1Q6ZQQ2 1576 aa11.13□□□□□ -0.63
TRIO-213ENST00000509354 FBXO31Q5XUX0 539 aaPredicted RBP11.13□□□□□ -0.63
TRIO-213ENST00000509354 ZBTB47Q9UFB7 747 aaPredicted RBP11.13□□□□□ -0.63
TRIO-213ENST00000509354 CLEC11AQ9Y240 323 aa11.13□□□□□ -0.63
TRIO-213ENST00000509354 ERVK-7P63135 1459 aa11.12□□□□□ -0.63
TRIO-213ENST00000509354 VWDEQ8N2E2 1590 aa11.12□□□□□ -0.63
TRIO-213ENST00000509354 ANKRD30AQ9BXX3 1397 aa11.12□□□□□ -0.63
TRIO-213ENST00000509354 NEURL4Q96JN8 1562 aa11.11□□□□□ -0.63
TRIO-213ENST00000509354 ILDR1Q86SU0 546 aaPredicted RBP11.11□□□□□ -0.63
TRIO-213ENST00000509354 UBR1Q8IWV7 1749 aa11.11□□□□□ -0.63
TRIO-213ENST00000509354 UNC13BO14795 1591 aa11.11□□□□□ -0.63
TRIO-213ENST00000509354 MIER1Q8N108 512 aa11.1□□□□□ -0.63
TRIO-213ENST00000509354 PLA2R1Q13018 1463 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms