RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 FBXO31Q5XUX0 539 aaPredicted RBP24.8■■□□□ 1.56
PDLIM5-212ENST00000509333 DNMT1P26358 1616 aaKnown RBP24.79■■□□□ 1.56
PDLIM5-212ENST00000509333 PTPRKQ15262 1439 aa24.79■■□□□ 1.56
PDLIM5-212ENST00000509333 CLTCQ00610 1675 aaKnown RBP24.78■■□□□ 1.56
PDLIM5-212ENST00000509333 UHRF1BP1Q6BDS2 1440 aa24.78■■□□□ 1.56
PDLIM5-212ENST00000509333 DUOX2Q9NRD8 1548 aa24.78■■□□□ 1.56
PDLIM5-212ENST00000509333 MROH2AA6NES4 1674 aa24.78■■□□□ 1.56
PDLIM5-212ENST00000509333 PREX1Q8TCU6 1659 aa24.72■■□□□ 1.55
PDLIM5-212ENST00000509333 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.72■■□□□ 1.55
PDLIM5-212ENST00000509333 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.71■■□□□ 1.55
PDLIM5-212ENST00000509333 CROCC2H7BZ55 1655 aa24.71■■□□□ 1.55
PDLIM5-212ENST00000509333 ERBINQ96RT1 1412 aa24.7■■□□□ 1.55
PDLIM5-212ENST00000509333 ADGRL2O95490 1459 aa24.7■■□□□ 1.54
PDLIM5-212ENST00000509333 FAM135AQ9P2D6 1515 aa24.69■■□□□ 1.54
PDLIM5-212ENST00000509333 KDM5DQ9BY66 1539 aa24.68■■□□□ 1.54
PDLIM5-212ENST00000509333 ITGAEP38570 1179 aa24.68■■□□□ 1.54
PDLIM5-212ENST00000509333 EIF2AK4Q9P2K8 1649 aaKnown RBP24.68■■□□□ 1.54
PDLIM5-212ENST00000509333 DMRT2Q9Y5R5 561 aa24.67■■□□□ 1.54
PDLIM5-212ENST00000509333 RNF17Q9BXT8 1623 aaKnown RBP24.67■■□□□ 1.54
PDLIM5-212ENST00000509333 PZPP20742 1482 aa24.66■■□□□ 1.54
PDLIM5-212ENST00000509333 ABCC3O15438 1527 aa24.64■■□□□ 1.53
PDLIM5-212ENST00000509333 TNRQ92752 1358 aa24.64■■□□□ 1.53
PDLIM5-212ENST00000509333 MROH1Q8NDA8 1641 aa24.64■■□□□ 1.53
PDLIM5-212ENST00000509333 ROCK1Q13464 1354 aa24.62■■□□□ 1.53
PDLIM5-212ENST00000509333 ANKRD50Q9ULJ7 1429 aa24.61■■□□□ 1.53
PDLIM5-212ENST00000509333 RRBP1Q9P2E9 1410 aaKnown RBP24.61■■□□□ 1.53
PDLIM5-212ENST00000509333 KANK1Q14678 1352 aa24.59■■□□□ 1.53
PDLIM5-212ENST00000509333 NCKAP5LQ9HCH0 1330 aa24.59■■□□□ 1.53
PDLIM5-212ENST00000509333 STRCQ7RTU9 1775 aa24.57■■□□□ 1.52
PDLIM5-212ENST00000509333 ARHGAP31Q2M1Z3 1444 aa24.57■■□□□ 1.52
PDLIM5-212ENST00000509333 A2ML1A8K2U0 1454 aa24.56■■□□□ 1.52
PDLIM5-212ENST00000509333 PKD2Q13563 968 aa24.55■■□□□ 1.52
PDLIM5-212ENST00000509333 THEMISQ8N1K5 641 aaPredicted RBP24.55■■□□□ 1.52
PDLIM5-212ENST00000509333 PRDM15P57071 1507 aaPredicted RBP24.54■■□□□ 1.52
PDLIM5-212ENST00000509333 CAMSAP1Q5T5Y3 1602 aa24.53■■□□□ 1.52
PDLIM5-212ENST00000509333 PTPRTO14522 1441 aa24.52■■□□□ 1.52
PDLIM5-212ENST00000509333 CFAP65Q6ZU64 1925 aaKnown RBP24.52■■□□□ 1.52
PDLIM5-212ENST00000509333 DEPDC5O75140 1603 aa24.52■■□□□ 1.52
PDLIM5-212ENST00000509333 CEP170BQ9Y4F5 1589 aaPredicted RBP24.51■■□□□ 1.51
PDLIM5-212ENST00000509333 ZC3H13Q5T200 1668 aaKnown RBP24.51■■□□□ 1.51
PDLIM5-212ENST00000509333 VWDEQ8N2E2 1590 aa24.5■■□□□ 1.51
PDLIM5-212ENST00000509333 MYO3AQ8NEV4 1616 aa24.5■■□□□ 1.51
PDLIM5-212ENST00000509333 ERVK-7P63135 1459 aa24.5■■□□□ 1.51
PDLIM5-212ENST00000509333 ILDR1Q86SU0 546 aaPredicted RBP24.49■■□□□ 1.51
PDLIM5-212ENST00000509333 NLRP1Q9C000 1473 aa24.49■■□□□ 1.51
PDLIM5-212ENST00000509333 LMTK2Q8IWU2 1503 aa24.49■■□□□ 1.51
PDLIM5-212ENST00000509333 SPATA31D1Q6ZQQ2 1576 aa24.49■■□□□ 1.51
PDLIM5-212ENST00000509333 CEP152O94986 1710 aa24.49■■□□□ 1.51
PDLIM5-212ENST00000509333 PLA2R1Q13018 1463 aa24.47■■□□□ 1.51
PDLIM5-212ENST00000509333 ANKLE2Q86XL3 938 aa24.47■■□□□ 1.51
PDLIM5-212ENST00000509333 IDI1Q13907 227 aa24.46■■□□□ 1.51
PDLIM5-212ENST00000509333 CERKQ8TCT0 537 aa24.45■■□□□ 1.5
PDLIM5-212ENST00000509333 ZNF142P52746 1687 aaPredicted RBP24.45■■□□□ 1.5
PDLIM5-212ENST00000509333 NUP155O75694 1391 aa24.42■■□□□ 1.5
PDLIM5-212ENST00000509333 SLC52A1Q9NWF4 448 aa24.4■■□□□ 1.5
PDLIM5-212ENST00000509333 UGGT1Q9NYU2 1555 aa24.4■■□□□ 1.5
PDLIM5-212ENST00000509333 NOS1P29475 1434 aa24.39■■□□□ 1.5
PDLIM5-212ENST00000509333 FBXO41Q8TF61 875 aa24.38■■□□□ 1.49
PDLIM5-212ENST00000509333 NAIPQ13075 1403 aa24.37■■□□□ 1.49
PDLIM5-212ENST00000509333 LTKP29376 864 aa24.35■■□□□ 1.49
PDLIM5-212ENST00000509333 TXNDC2Q86VQ3 553 aa24.34■■□□□ 1.49
PDLIM5-212ENST00000509333 STAG3Q9UJ98 1225 aa24.34■■□□□ 1.49
PDLIM5-212ENST00000509333 EFCAB6Q5THR3 1501 aa24.34■■□□□ 1.49
PDLIM5-212ENST00000509333 UNC13BO14795 1591 aa24.33■■□□□ 1.49
PDLIM5-212ENST00000509333 RPRD2Q5VT52 1461 aaKnown RBP24.32■■□□□ 1.48
PDLIM5-212ENST00000509333 ZNF335Q9H4Z2 1342 aaPredicted RBP24.32■■□□□ 1.48
PDLIM5-212ENST00000509333 HFM1A2PYH4 1435 aa24.28■■□□□ 1.48
PDLIM5-212ENST00000509333 MED14O60244 1454 aa24.28■■□□□ 1.48
PDLIM5-212ENST00000509333 EID1Q9Y6B2 187 aa24.28■■□□□ 1.48
PDLIM5-212ENST00000509333 LTBP4Q8N2S1 1624 aa24.28■■□□□ 1.48
PDLIM5-212ENST00000509333 TET3O43151 1660 aa24.27■■□□□ 1.48
PDLIM5-212ENST00000509333 SYNMO15061 1565 aa24.27■■□□□ 1.48
PDLIM5-212ENST00000509333 TMEM2Q9UHN6 1383 aa24.27■■□□□ 1.48
PDLIM5-212ENST00000509333 NPHP4O75161 1426 aaPredicted RBP24.27■■□□□ 1.48
PDLIM5-212ENST00000509333 TRIM52Q96A61 297 aa24.26■■□□□ 1.47
PDLIM5-212ENST00000509333 UBR1Q8IWV7 1749 aa24.26■■□□□ 1.47
PDLIM5-212ENST00000509333 ARHGAP23Q9P227 1491 aa24.26■■□□□ 1.47
PDLIM5-212ENST00000509333 NEURL4Q96JN8 1562 aa24.25■■□□□ 1.47
PDLIM5-212ENST00000509333 IQGAP3Q86VI3 1631 aa24.24■■□□□ 1.47
PDLIM5-212ENST00000509333 SLIT1O75093 1534 aa24.23■■□□□ 1.47
PDLIM5-212ENST00000509333 PIK3C2BO00750 1634 aa24.23■■□□□ 1.47
PDLIM5-212ENST00000509333 GCC2Q8IWJ2 1684 aa24.21■■□□□ 1.47
PDLIM5-212ENST00000509333 E9PCH4 1651 aa24.2■■□□□ 1.46
PDLIM5-212ENST00000509333 SCAF11Q99590 1463 aaKnown RBP24.19■■□□□ 1.46
PDLIM5-212ENST00000509333 CHGAP10645 457 aaKnown RBP24.19■■□□□ 1.46
PDLIM5-212ENST00000509333 HDGFP51858 240 aaKnown RBP24.18■■□□□ 1.46
PDLIM5-212ENST00000509333 POLR1AO95602 1720 aaPredicted RBP24.18■■□□□ 1.46
PDLIM5-212ENST00000509333 SLC4A1APQ9BWU0 796 aaKnown RBP24.17■■□□□ 1.46
PDLIM5-212ENST00000509333 KDM5AP29375 1690 aaKnown RBP24.15■■□□□ 1.46
PDLIM5-212ENST00000509333 ADGRB3O60242 1522 aa24.11■■□□□ 1.45
PDLIM5-212ENST00000509333 SLC26A8Q96RN1 970 aa24.11■■□□□ 1.45
PDLIM5-212ENST00000509333 MPHOSPH9Q99550 1183 aa24.11■■□□□ 1.45
PDLIM5-212ENST00000509333 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.1■■□□□ 1.45
PDLIM5-212ENST00000509333 TMEM131LA2VDJ0 1609 aa24.1■■□□□ 1.45
PDLIM5-212ENST00000509333 IQGAP1P46940 1657 aa24.09■■□□□ 1.45
PDLIM5-212ENST00000509333 IQSEC2Q5JU85 1478 aa24.09■■□□□ 1.45
PDLIM5-212ENST00000509333 ZFYVE9O95405 1425 aa24.09■■□□□ 1.45
PDLIM5-212ENST00000509333 SETD5Q9C0A6 1442 aa24.09■■□□□ 1.45
PDLIM5-212ENST00000509333 RIMS2Q9UQ26 1411 aa24.09■■□□□ 1.45
PDLIM5-212ENST00000509333 NUTM2DQ5VT03 806 aaPredicted RBP24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms