RNA–Protein interactions for RNA: ENST00000508717.1

TRIO-212, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 859 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-212ENST00000508717 DEPDC5O75140 1603 aa19.76■□□□□ 0.75
TRIO-212ENST00000508717 ARID4BQ4LE39 1312 aaPredicted RBP19.76■□□□□ 0.75
TRIO-212ENST00000508717 PRDM15P57071 1507 aaPredicted RBP19.73■□□□□ 0.75
TRIO-212ENST00000508717 KDM5DQ9BY66 1539 aa19.73■□□□□ 0.75
TRIO-212ENST00000508717 MROH1Q8NDA8 1641 aa19.73■□□□□ 0.75
TRIO-212ENST00000508717 ADAMTSL3P82987 1691 aa19.71■□□□□ 0.75
TRIO-212ENST00000508717 UNC13BO14795 1591 aa19.7■□□□□ 0.74
TRIO-212ENST00000508717 VWDEQ8N2E2 1590 aa19.7■□□□□ 0.74
TRIO-212ENST00000508717 GGT6Q6P531 493 aa19.7■□□□□ 0.74
TRIO-212ENST00000508717 RAB3GAP2Q9H2M9 1393 aa19.69■□□□□ 0.74
TRIO-212ENST00000508717 CNTLNQ9NXG0 1405 aa19.68■□□□□ 0.74
TRIO-212ENST00000508717 LMTK2Q8IWU2 1503 aa19.67■□□□□ 0.74
TRIO-212ENST00000508717 MLECQ14165 292 aa19.66■□□□□ 0.74
TRIO-212ENST00000508717 KANK1Q14678 1352 aa19.66■□□□□ 0.74
TRIO-212ENST00000508717 WASHC2CQ9Y4E1 1318 aa19.64■□□□□ 0.73
TRIO-212ENST00000508717 ABCC3O15438 1527 aa19.64■□□□□ 0.73
TRIO-212ENST00000508717 ZC3H13Q5T200 1668 aaKnown RBP19.64■□□□□ 0.73
TRIO-212ENST00000508717 NUP155O75694 1391 aa19.63■□□□□ 0.73
TRIO-212ENST00000508717 KDM4FA0A1W2PPD8 638 aa19.63■□□□□ 0.73
TRIO-212ENST00000508717 IQGAP3Q86VI3 1631 aa19.62■□□□□ 0.73
TRIO-212ENST00000508717 ARHGAP31Q2M1Z3 1444 aa19.62■□□□□ 0.73
TRIO-212ENST00000508717 MADDQ8WXG6 1647 aa19.62■□□□□ 0.73
TRIO-212ENST00000508717 PCGF6Q9BYE7 350 aa19.61■□□□□ 0.73
TRIO-212ENST00000508717 MROH2AA6NES4 1674 aa19.61■□□□□ 0.73
TRIO-212ENST00000508717 FER1L4A9Z1Z3 1794 aa19.6■□□□□ 0.73
TRIO-212ENST00000508717 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.6■□□□□ 0.733e-8■□□□□ 8.6
TRIO-212ENST00000508717 ESF1Q9H501 851 aaKnown RBP19.6■□□□□ 0.73
TRIO-212ENST00000508717 ZMYM3Q14202 1370 aa19.58■□□□□ 0.73
TRIO-212ENST00000508717 PZPP20742 1482 aa19.57■□□□□ 0.72
TRIO-212ENST00000508717 TET3O43151 1660 aa19.56■□□□□ 0.72
TRIO-212ENST00000508717 CLTCQ00610 1675 aaKnown RBP19.56■□□□□ 0.72
TRIO-212ENST00000508717 RPRD2Q5VT52 1461 aaKnown RBP19.56■□□□□ 0.72
TRIO-212ENST00000508717 PTPRMP28827 1452 aa19.55■□□□□ 0.72
TRIO-212ENST00000508717 TRIM52Q96A61 297 aa19.55■□□□□ 0.72
TRIO-212ENST00000508717 EFCAB6Q5THR3 1501 aa19.55■□□□□ 0.72
TRIO-212ENST00000508717 CEP152O94986 1710 aa19.54■□□□□ 0.72
TRIO-212ENST00000508717 CAMSAP1Q5T5Y3 1602 aa19.54■□□□□ 0.72
TRIO-212ENST00000508717 RIMS1Q86UR5 1692 aaKnown RBP19.53■□□□□ 0.72
TRIO-212ENST00000508717 NPATQ14207 1427 aa19.53■□□□□ 0.72
TRIO-212ENST00000508717 MPHOSPH9Q99550 1183 aa19.52■□□□□ 0.72
TRIO-212ENST00000508717 SLC4A1APQ9BWU0 796 aaKnown RBP19.51■□□□□ 0.71
TRIO-212ENST00000508717 C3P01024 1663 aa19.5■□□□□ 0.71
TRIO-212ENST00000508717 NOS1P29475 1434 aa19.49■□□□□ 0.71
TRIO-212ENST00000508717 E9PCH4 1651 aa19.47■□□□□ 0.71
TRIO-212ENST00000508717 PKD2Q13563 968 aa19.47■□□□□ 0.71
TRIO-212ENST00000508717 PTPRTO14522 1441 aa19.47■□□□□ 0.71
TRIO-212ENST00000508717 SPATA31D1Q6ZQQ2 1576 aa19.47■□□□□ 0.71
TRIO-212ENST00000508717 CEBPAP49715 358 aaPredicted RBP19.46■□□□□ 0.71
TRIO-212ENST00000508717 ERVK-7P63135 1459 aa19.46■□□□□ 0.71
TRIO-212ENST00000508717 SETD1BQ9UPS6 1966 aaKnown RBP19.46■□□□□ 0.71
TRIO-212ENST00000508717 FBXO31Q5XUX0 539 aaPredicted RBP19.44■□□□□ 0.7
TRIO-212ENST00000508717 PREX1Q8TCU6 1659 aa19.43■□□□□ 0.7
TRIO-212ENST00000508717 SLC52A1Q9NWF4 448 aa19.41■□□□□ 0.7
TRIO-212ENST00000508717 DHX57Q6P158 1386 aaKnown RBP19.41■□□□□ 0.7
TRIO-212ENST00000508717 PLA2R1Q13018 1463 aa19.41■□□□□ 0.7
TRIO-212ENST00000508717 TNRQ92752 1358 aa19.4■□□□□ 0.7
TRIO-212ENST00000508717 ANKRD30BQ9BXX2 1392 aa19.38■□□□□ 0.69
TRIO-212ENST00000508717 NLRP1Q9C000 1473 aa19.38■□□□□ 0.69
TRIO-212ENST00000508717 SYNMO15061 1565 aa19.37■□□□□ 0.69
TRIO-212ENST00000508717 TRPM2O94759 1503 aa19.37■□□□□ 0.69
TRIO-212ENST00000508717 SPHKAPQ2M3C7 1700 aa19.37■□□□□ 0.69
TRIO-212ENST00000508717 CFAP65Q6ZU64 1925 aaKnown RBP19.35■□□□□ 0.69
TRIO-212ENST00000508717 PIK3C2BO00750 1634 aa19.35■□□□□ 0.69
TRIO-212ENST00000508717 FOXD1Q16676 465 aa19.34■□□□□ 0.69
TRIO-212ENST00000508717 IDI1Q13907 227 aa19.33■□□□□ 0.68
TRIO-212ENST00000508717 A2ML1A8K2U0 1454 aa19.32■□□□□ 0.68
TRIO-212ENST00000508717 UHRF1BP1Q6BDS2 1440 aa19.32■□□□□ 0.68
TRIO-212ENST00000508717 KDM5AP29375 1690 aaKnown RBP19.3■□□□□ 0.68
TRIO-212ENST00000508717 CLSPNQ9HAW4 1339 aa19.3■□□□□ 0.68
TRIO-212ENST00000508717 MYO3AQ8NEV4 1616 aa19.3■□□□□ 0.68
TRIO-212ENST00000508717 ZNF142P52746 1687 aaPredicted RBP19.3■□□□□ 0.68
TRIO-212ENST00000508717 PLPPR3Q6T4P5 718 aa19.29■□□□□ 0.68
TRIO-212ENST00000508717 NEURL4Q96JN8 1562 aa19.28■□□□□ 0.68
TRIO-212ENST00000508717 CCDC144AA2RUR9 1427 aa19.28■□□□□ 0.68
TRIO-212ENST00000508717 CEP170BQ9Y4F5 1589 aaPredicted RBP19.27■□□□□ 0.68
TRIO-212ENST00000508717 CLTCL1P53675 1640 aa19.27■□□□□ 0.68
TRIO-212ENST00000508717 UGGT1Q9NYU2 1555 aa19.27■□□□□ 0.67
TRIO-212ENST00000508717 LMTK3Q96Q04 1460 aa19.26■□□□□ 0.67
TRIO-212ENST00000508717 THEMISQ8N1K5 641 aaPredicted RBP19.24■□□□□ 0.67
TRIO-212ENST00000508717 TMEM131LA2VDJ0 1609 aa19.24■□□□□ 0.67
TRIO-212ENST00000508717 ADGRB3O60242 1522 aa19.24■□□□□ 0.67
TRIO-212ENST00000508717 SPATA31E1Q6ZUB1 1445 aa19.23■□□□□ 0.67
TRIO-212ENST00000508717 UBR1Q8IWV7 1749 aa19.22■□□□□ 0.67
TRIO-212ENST00000508717 ARHGAP23Q9P227 1491 aa19.21■□□□□ 0.67
TRIO-212ENST00000508717 AEBP2Q6ZN18 517 aaPredicted RBP19.2■□□□□ 0.66
TRIO-212ENST00000508717 KIF1BO60333 1816 aa19.2■□□□□ 0.66
TRIO-212ENST00000508717 SLIT1O75093 1534 aa19.2■□□□□ 0.66
TRIO-212ENST00000508717 STAG3Q9UJ98 1225 aa19.18■□□□□ 0.66
TRIO-212ENST00000508717 RPGRIP1LQ68CZ1 1315 aa19.18■□□□□ 0.66
TRIO-212ENST00000508717 TMEM2Q9UHN6 1383 aa19.18■□□□□ 0.66
TRIO-212ENST00000508717 ZFYVE9O95405 1425 aa19.16■□□□□ 0.66
TRIO-212ENST00000508717 STAC3Q96MF2 364 aa19.15■□□□□ 0.66
TRIO-212ENST00000508717 SIN3AQ96ST3 1273 aa19.15■□□□□ 0.66
TRIO-212ENST00000508717 HDGFP51858 240 aaKnown RBP19.14■□□□□ 0.65
TRIO-212ENST00000508717 CCER1Q8TC90 406 aaPredicted RBP19.14■□□□□ 0.65
TRIO-212ENST00000508717 CHGAP10645 457 aaKnown RBP19.13■□□□□ 0.65
TRIO-212ENST00000508717 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.13■□□□□ 0.65
TRIO-212ENST00000508717 MYO5BQ9ULV0 1848 aa19.12■□□□□ 0.65
TRIO-212ENST00000508717 RIMS2Q9UQ26 1411 aa19.11■□□□□ 0.65
TRIO-212ENST00000508717 ANKLE2Q86XL3 938 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms