RNA–Protein interactions for RNA: ENST00000508657.5

KLHL3-209, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,981 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-209ENST00000508657 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.31□□□□□ -0.6
KLHL3-209ENST00000508657 GPATCH3Q96I76 525 aa11.31□□□□□ -0.6
KLHL3-209ENST00000508657 FOXD4L1Q9NU39 408 aa11.31□□□□□ -0.6
KLHL3-209ENST00000508657 ARID3AQ99856 593 aa11.31□□□□□ -0.6
KLHL3-209ENST00000508657 KDM4AO75164 1064 aa11.3□□□□□ -0.6
KLHL3-209ENST00000508657 MYCNP04198 464 aaPredicted RBP11.3□□□□□ -0.6
KLHL3-209ENST00000508657 APPP05067 770 aa11.3□□□□□ -0.6
KLHL3-209ENST00000508657 HSCBQ8IWL3 235 aa11.3□□□□□ -0.6
KLHL3-209ENST00000508657 GRM1Q13255 1194 aa11.29□□□□□ -0.6
KLHL3-209ENST00000508657 AMOTL1Q8IY63 956 aa11.29□□□□□ -0.6
KLHL3-209ENST00000508657 RTN4Q9NQC3 1192 aaKnown RBP11.29□□□□□ -0.6
KLHL3-209ENST00000508657 OSCARQ8IYS5 282 aa11.29□□□□□ -0.6
KLHL3-209ENST00000508657 MS4A1P11836 297 aa11.29□□□□□ -0.6
KLHL3-209ENST00000508657 IKQ13123 557 aaPredicted RBP11.29□□□□□ -0.6
KLHL3-209ENST00000508657 MINK1Q8N4C8 1332 aaPredicted RBP11.29□□□□□ -0.6
KLHL3-209ENST00000508657 VSIG10Q8N0Z9 540 aa11.28□□□□□ -0.6
KLHL3-209ENST00000508657 PAF1Q8N7H5 531 aa11.28□□□□□ -0.6
KLHL3-209ENST00000508657 CLUAP1Q96AJ1 413 aa11.28□□□□□ -0.6
KLHL3-209ENST00000508657 RRP7AQ9Y3A4 280 aaKnown RBP11.28□□□□□ -0.6
KLHL3-209ENST00000508657 CCDC27Q2M243 656 aa11.28□□□□□ -0.6
KLHL3-209ENST00000508657 TMEM132AQ24JP5 1023 aa11.27□□□□□ -0.6
KLHL3-209ENST00000508657 KIF27Q86VH2 1401 aa11.27□□□□□ -0.6
KLHL3-209ENST00000508657 CCDC43Q96MW1 224 aaKnown RBP11.27□□□□□ -0.6
KLHL3-209ENST00000508657 TEFQ10587 303 aa11.27□□□□□ -0.61
KLHL3-209ENST00000508657 GLIPR1L2Q4G1C9 344 aa11.27□□□□□ -0.61
KLHL3-209ENST00000508657 TDRD9Q8NDG6 1382 aaKnown RBP11.27□□□□□ -0.61
KLHL3-209ENST00000508657 NAP1L5Q96NT1 182 aaPredicted RBP11.26□□□□□ -0.61
KLHL3-209ENST00000508657 RBM42Q9BTD8 480 aaKnown RBP11.26□□□□□ -0.61
KLHL3-209ENST00000508657 ROCK2O75116 1388 aaKnown RBP11.26□□□□□ -0.61
KLHL3-209ENST00000508657 CECR2Q9BXF3 1484 aa11.26□□□□□ -0.61
KLHL3-209ENST00000508657 NLRP2Q9NX02 1062 aa11.26□□□□□ -0.61
KLHL3-209ENST00000508657 TERF2IPQ9NYB0 399 aa11.26□□□□□ -0.61
KLHL3-209ENST00000508657 CHMP4BP1P59074 171 aa11.26□□□□□ -0.61
KLHL3-209ENST00000508657 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.25□□□□□ -0.61
KLHL3-209ENST00000508657 CARMIL2Q6F5E8 1435 aa11.25□□□□□ -0.61
KLHL3-209ENST00000508657 AKAP17AQ02040 695 aaKnown RBP11.25□□□□□ -0.61
KLHL3-209ENST00000508657 SMC4Q9NTJ3 1288 aa11.25□□□□□ -0.61
KLHL3-209ENST00000508657 PPM1FP49593 454 aaPredicted RBP11.25□□□□□ -0.61
KLHL3-209ENST00000508657 FOXD4L6Q3SYB3 417 aaPredicted RBP11.25□□□□□ -0.61
KLHL3-209ENST00000508657 FOXD4L3Q6VB84 417 aaPredicted RBP11.25□□□□□ -0.61
KLHL3-209ENST00000508657 AIMP1Q12904 312 aaKnown RBP11.25□□□□□ -0.61
KLHL3-209ENST00000508657 CUX2O14529 1486 aa11.24□□□□□ -0.61
KLHL3-209ENST00000508657 FOSBP53539 338 aa11.24□□□□□ -0.61
KLHL3-209ENST00000508657 RILPL2Q969X0 211 aa11.24□□□□□ -0.61
KLHL3-209ENST00000508657 IPO8O15397 1037 aaKnown RBP11.23□□□□□ -0.61
KLHL3-209ENST00000508657 TPD52L1Q16890 204 aaPredicted RBP11.22□□□□□ -0.61
KLHL3-209ENST00000508657 NUP155O75694 1391 aa11.22□□□□□ -0.61
KLHL3-209ENST00000508657 RBM5P52756 815 aaKnown RBP eCLIP11.22□□□□□ -0.61
KLHL3-209ENST00000508657 COG3Q96JB2 828 aa11.22□□□□□ -0.61
KLHL3-209ENST00000508657 ATP2B2Q01814 1243 aa11.21□□□□□ -0.62
KLHL3-209ENST00000508657 CALD1Q05682 793 aaKnown RBP11.21□□□□□ -0.62
KLHL3-209ENST00000508657 STK11IPQ8N1F8 1099 aa11.21□□□□□ -0.62
KLHL3-209ENST00000508657 SF3A1Q15459 793 aaKnown RBP11.2□□□□□ -0.62
KLHL3-209ENST00000508657 ESCO1Q5FWF5 840 aa11.2□□□□□ -0.62
KLHL3-209ENST00000508657 GZF1Q9H116 711 aaPredicted RBP11.2□□□□□ -0.62
KLHL3-209ENST00000508657 PROSER2Q86WR7 435 aaPredicted RBP11.2□□□□□ -0.62
KLHL3-209ENST00000508657 MFAP1P55081 439 aaKnown RBP11.2□□□□□ -0.62
KLHL3-209ENST00000508657 C9orf78Q9NZ63 289 aaPredicted RBP11.19□□□□□ -0.62
KLHL3-209ENST00000508657 ZNF219Q9P2Y4 722 aaPredicted RBP11.19□□□□□ -0.62
KLHL3-209ENST00000508657 WRNQ14191 1432 aaPredicted RBP eCLIP11.19□□□□□ -0.62
KLHL3-209ENST00000508657 CHMP4CQ96CF2 233 aa11.19□□□□□ -0.62
KLHL3-209ENST00000508657 DDX54Q8TDD1 881 aaKnown RBP11.19□□□□□ -0.62
KLHL3-209ENST00000508657 ECM2O94769 699 aaPredicted RBP11.19□□□□□ -0.62
KLHL3-209ENST00000508657 WWC3Q9ULE0 1092 aa11.19□□□□□ -0.62
KLHL3-209ENST00000508657 PCMTD1Q96MG8 357 aaPredicted RBP11.18□□□□□ -0.62
KLHL3-209ENST00000508657 CARMIL1Q5VZK9 1371 aa11.18□□□□□ -0.62
KLHL3-209ENST00000508657 R3HCC1Q9Y3T6 440 aaKnown RBP11.18□□□□□ -0.62
KLHL3-209ENST00000508657 MCTP1Q6DN14 999 aa11.18□□□□□ -0.62
KLHL3-209ENST00000508657 BICDL1Q6ZP65 573 aa11.18□□□□□ -0.62
KLHL3-209ENST00000508657 RAPGEF4Q8WZA2 1011 aa11.18□□□□□ -0.62
KLHL3-209ENST00000508657 BCL2L13Q9BXK5 485 aa11.17□□□□□ -0.62
KLHL3-209ENST00000508657 PATL2C9JE40 543 aaKnown RBP11.17□□□□□ -0.62
KLHL3-209ENST00000508657 SYNE3Q6ZMZ3 975 aa11.17□□□□□ -0.62
KLHL3-209ENST00000508657 NEXNQ0ZGT2 675 aa11.17□□□□□ -0.62
KLHL3-209ENST00000508657 PLCD3Q8N3E9 789 aa11.17□□□□□ -0.62
KLHL3-209ENST00000508657 SPDYE4A6NLX3 237 aa11.17□□□□□ -0.62
KLHL3-209ENST00000508657 GOLGA3Q08378 1498 aa11.16□□□□□ -0.62
KLHL3-209ENST00000508657 H3BQV1 296 aa11.16□□□□□ -0.62
KLHL3-209ENST00000508657 IFFO2Q5TF58 517 aa11.16□□□□□ -0.62
KLHL3-209ENST00000508657 XPCQ01831 940 aaPredicted RBP11.16□□□□□ -0.62
KLHL3-209ENST00000508657 TTLL12Q14166 644 aaPredicted RBP11.16□□□□□ -0.62
KLHL3-209ENST00000508657 NFXL1Q6ZNB6 911 aa11.16□□□□□ -0.62
KLHL3-209ENST00000508657 TPM4P67936 248 aa11.15□□□□□ -0.62
KLHL3-209ENST00000508657 ADAMTS2O95450 1211 aa11.15□□□□□ -0.62
KLHL3-209ENST00000508657 NEUROD6Q96NK8 337 aa11.15□□□□□ -0.63
KLHL3-209ENST00000508657 HSPA5P11021 654 aaKnown RBP11.14□□□□□ -0.63
KLHL3-209ENST00000508657 KTN1Q86UP2 1357 aaKnown RBP11.14□□□□□ -0.63
KLHL3-209ENST00000508657 HMMRO75330 724 aa11.14□□□□□ -0.63
KLHL3-209ENST00000508657 PDE3BQ13370 1112 aa11.14□□□□□ -0.63
KLHL3-209ENST00000508657 ZFYVE27Q5T4F4 411 aa11.14□□□□□ -0.63
KLHL3-209ENST00000508657 CEP162Q5TB80 1403 aa11.13□□□□□ -0.63
KLHL3-209ENST00000508657 SLKQ9H2G2 1235 aaPredicted RBP11.13□□□□□ -0.63
KLHL3-209ENST00000508657 FAM184AQ8NB25 1140 aa11.13□□□□□ -0.63
KLHL3-209ENST00000508657 PMFBP1Q8TBY8 1022 aa11.13□□□□□ -0.63
KLHL3-209ENST00000508657 CCDC34Q96HJ3 373 aa11.13□□□□□ -0.63
KLHL3-209ENST00000508657 SOGA1O94964 1423 aa11.12□□□□□ -0.63
KLHL3-209ENST00000508657 WWC2Q6AWC2 1192 aa11.12□□□□□ -0.63
KLHL3-209ENST00000508657 JPH4Q96JJ6 628 aa11.12□□□□□ -0.63
KLHL3-209ENST00000508657 HTATSF1O43719 755 aaKnown RBP11.12□□□□□ -0.63
KLHL3-209ENST00000508657 RIC3Q7Z5B4 369 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms