RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 ABCA6Q8N139 1617 aa13.11□□□□□ -0.31
USP46-207ENST00000508499 DIP2CQ9Y2E4 1556 aa13.11□□□□□ -0.31
USP46-207ENST00000508499 AFAP1Q8N556 730 aa13.11□□□□□ -0.31
USP46-207ENST00000508499 EIF2AK4Q9P2K8 1649 aaKnown RBP13.11□□□□□ -0.31
USP46-207ENST00000508499 HFM1A2PYH4 1435 aa13.1□□□□□ -0.31
USP46-207ENST00000508499 SPAG9O60271 1321 aaKnown RBP13.1□□□□□ -0.31
USP46-207ENST00000508499 ANKRD30AQ9BXX3 1397 aa13.09□□□□□ -0.31
USP46-207ENST00000508499 DUOX2Q9NRD8 1548 aa13.09□□□□□ -0.31
USP46-207ENST00000508499 RAPGEF3O95398 923 aa13.09□□□□□ -0.31
USP46-207ENST00000508499 ZNF219Q9P2Y4 722 aaPredicted RBP13.09□□□□□ -0.31
USP46-207ENST00000508499 AGLP35573 1532 aa13.07□□□□□ -0.32
USP46-207ENST00000508499 ERBINQ96RT1 1412 aa13.07□□□□□ -0.32
USP46-207ENST00000508499 ATP10AO60312 1499 aa13.06□□□□□ -0.32
USP46-207ENST00000508499 ACIN1Q9UKV3 1341 aaKnown RBP13.06□□□□□ -0.32
USP46-207ENST00000508499 NAIPQ13075 1403 aa13.06□□□□□ -0.32
USP46-207ENST00000508499 DEPDC5O75140 1603 aa13.05□□□□□ -0.32
USP46-207ENST00000508499 YEATS2Q9ULM3 1422 aa13.05□□□□□ -0.32
USP46-207ENST00000508499 RNF17Q9BXT8 1623 aaKnown RBP13.04□□□□□ -0.32
USP46-207ENST00000508499 KIF15Q9NS87 1388 aa13.04□□□□□ -0.32
USP46-207ENST00000508499 A2MP01023 1474 aa13.04□□□□□ -0.32
USP46-207ENST00000508499 DHX29Q7Z478 1369 aaKnown RBP13.03□□□□□ -0.32
USP46-207ENST00000508499 FAM135AQ9P2D6 1515 aa13.03□□□□□ -0.32
USP46-207ENST00000508499 ABCB7O75027 752 aa13.03□□□□□ -0.32
USP46-207ENST00000508499 HRCP23327 699 aa13.03□□□□□ -0.32
USP46-207ENST00000508499 ANKRD50Q9ULJ7 1429 aa13.02□□□□□ -0.33
USP46-207ENST00000508499 UNC13BO14795 1591 aa13.02□□□□□ -0.33
USP46-207ENST00000508499 SIGLEC1Q9BZZ2 1709 aa13.01□□□□□ -0.33
USP46-207ENST00000508499 SETD5Q9C0A6 1442 aa13□□□□□ -0.33
USP46-207ENST00000508499 PRDM15P57071 1507 aaPredicted RBP12.99□□□□□ -0.33
USP46-207ENST00000508499 KDM5DQ9BY66 1539 aa12.99□□□□□ -0.33
USP46-207ENST00000508499 RBM42Q9BTD8 480 aaKnown RBP12.98□□□□□ -0.33
USP46-207ENST00000508499 SLC4A1APQ9BWU0 796 aaKnown RBP12.98□□□□□ -0.33
USP46-207ENST00000508499 CHIC2Q9UKJ5 165 aa12.98□□□□□ -0.33
USP46-207ENST00000508499 ZC3H13Q5T200 1668 aaKnown RBP12.98□□□□□ -0.33
USP46-207ENST00000508499 MROH1Q8NDA8 1641 aa12.98□□□□□ -0.33
USP46-207ENST00000508499 VWDEQ8N2E2 1590 aa12.98□□□□□ -0.33
USP46-207ENST00000508499 ITGAEP38570 1179 aa12.97□□□□□ -0.33
USP46-207ENST00000508499 IQGAP3Q86VI3 1631 aa12.97□□□□□ -0.33
USP46-207ENST00000508499 RRP7BPQ9NSQ0 103 aa12.96□□□□□ -0.33
USP46-207ENST00000508499 SLC4A2P04920 1241 aa12.95□□□□□ -0.34
USP46-207ENST00000508499 RAB3GAP2Q9H2M9 1393 aa12.94□□□□□ -0.34
USP46-207ENST00000508499 LMTK2Q8IWU2 1503 aa12.93□□□□□ -0.34
USP46-207ENST00000508499 MYT1LQ9UL68 1186 aa12.93□□□□□ -0.34
USP46-207ENST00000508499 MROH2AA6NES4 1674 aa12.93□□□□□ -0.34
USP46-207ENST00000508499 TET3O43151 1660 aa12.91□□□□□ -0.34
USP46-207ENST00000508499 ADAMTSL3P82987 1691 aa12.91□□□□□ -0.34
USP46-207ENST00000508499 PCGF6Q9BYE7 350 aa12.91□□□□□ -0.34
USP46-207ENST00000508499 FER1L4A9Z1Z3 1794 aa12.89□□□□□ -0.35
USP46-207ENST00000508499 KIF3BO15066 747 aa12.88□□□□□ -0.35
USP46-207ENST00000508499 CHRDL2Q6WN34 429 aa12.88□□□□□ -0.35
USP46-207ENST00000508499 CEP152O94986 1710 aa12.88□□□□□ -0.35
USP46-207ENST00000508499 CAMSAP1Q5T5Y3 1602 aa12.88□□□□□ -0.35
USP46-207ENST00000508499 ABCC3O15438 1527 aa12.87□□□□□ -0.35
USP46-207ENST00000508499 CNTLNQ9NXG0 1405 aa12.87□□□□□ -0.35
USP46-207ENST00000508499 PZPP20742 1482 aa12.87□□□□□ -0.35
USP46-207ENST00000508499 RPRD2Q5VT52 1461 aaKnown RBP12.87□□□□□ -0.35
USP46-207ENST00000508499 EFCAB6Q5THR3 1501 aa12.87□□□□□ -0.35
USP46-207ENST00000508499 ARHGAP31Q2M1Z3 1444 aa12.86□□□□□ -0.35
USP46-207ENST00000508499 KANK1Q14678 1352 aa12.86□□□□□ -0.35
USP46-207ENST00000508499 E9PCH4 1651 aa12.85□□□□□ -0.35
USP46-207ENST00000508499 CLTCQ00610 1675 aaKnown RBP12.85□□□□□ -0.35
USP46-207ENST00000508499 NUP155O75694 1391 aa12.83□□□□□ -0.35
USP46-207ENST00000508499 MADDQ8WXG6 1647 aa12.83□□□□□ -0.36
USP46-207ENST00000508499 C3P01024 1663 aa12.81□□□□□ -0.36
USP46-207ENST00000508499 SPHKAPQ2M3C7 1700 aa12.81□□□□□ -0.36
USP46-207ENST00000508499 GGT6Q6P531 493 aa12.8□□□□□ -0.36
USP46-207ENST00000508499 SAMD1Q6SPF0 538 aaPredicted RBP12.8□□□□□ -0.36
USP46-207ENST00000508499 PREX1Q8TCU6 1659 aa12.8□□□□□ -0.36
USP46-207ENST00000508499 ARID4BQ4LE39 1312 aaPredicted RBP12.79□□□□□ -0.36
USP46-207ENST00000508499 WASHC2CQ9Y4E1 1318 aa12.79□□□□□ -0.36
USP46-207ENST00000508499 RIMS1Q86UR5 1692 aaKnown RBP12.79□□□□□ -0.36
USP46-207ENST00000508499 NPATQ14207 1427 aa12.78□□□□□ -0.36
USP46-207ENST00000508499 SPATA31D1Q6ZQQ2 1576 aa12.78□□□□□ -0.36
USP46-207ENST00000508499 PTPRTO14522 1441 aa12.78□□□□□ -0.36
USP46-207ENST00000508499 KDM5AP29375 1690 aaKnown RBP12.78□□□□□ -0.36
USP46-207ENST00000508499 DHX57Q6P158 1386 aaKnown RBP12.78□□□□□ -0.36
USP46-207ENST00000508499 MPHOSPH9Q99550 1183 aa12.78□□□□□ -0.36
USP46-207ENST00000508499 CLSPNQ9HAW4 1339 aa12.78□□□□□ -0.36
USP46-207ENST00000508499 PIK3C2BO00750 1634 aa12.77□□□□□ -0.37
USP46-207ENST00000508499 SETD1BQ9UPS6 1966 aaKnown RBP12.77□□□□□ -0.37
USP46-207ENST00000508499 NEURL4Q96JN8 1562 aa12.76□□□□□ -0.37
USP46-207ENST00000508499 TRPM2O94759 1503 aa12.76□□□□□ -0.37
USP46-207ENST00000508499 NOS1P29475 1434 aa12.76□□□□□ -0.37
USP46-207ENST00000508499 ZMYM3Q14202 1370 aa12.76□□□□□ -0.37
USP46-207ENST00000508499 TRIM52Q96A61 297 aa12.76□□□□□ -0.37
USP46-207ENST00000508499 SP7Q8TDD2 431 aaPredicted RBP12.75□□□□□ -0.37
USP46-207ENST00000508499 ERVK-7P63135 1459 aa12.74□□□□□ -0.37
USP46-207ENST00000508499 ESF1Q9H501 851 aaKnown RBP12.73□□□□□ -0.37
USP46-207ENST00000508499 PTPRMP28827 1452 aa12.73□□□□□ -0.37
USP46-207ENST00000508499 CFAP65Q6ZU64 1925 aaKnown RBP12.73□□□□□ -0.37
USP46-207ENST00000508499 ANKRD30BQ9BXX2 1392 aa12.73□□□□□ -0.37
USP46-207ENST00000508499 SYNMO15061 1565 aa12.73□□□□□ -0.37
USP46-207ENST00000508499 PKD2Q13563 968 aa12.72□□□□□ -0.37
USP46-207ENST00000508499 MLECQ14165 292 aa12.72□□□□□ -0.37
USP46-207ENST00000508499 PLA2R1Q13018 1463 aa12.72□□□□□ -0.37
USP46-207ENST00000508499 ZNF142P52746 1687 aaPredicted RBP12.71□□□□□ -0.37
USP46-207ENST00000508499 KIF1BO60333 1816 aa12.71□□□□□ -0.38
USP46-207ENST00000508499 NLRP1Q9C000 1473 aa12.69□□□□□ -0.38
USP46-207ENST00000508499 CLTCL1P53675 1640 aa12.69□□□□□ -0.38
USP46-207ENST00000508499 MYO3AQ8NEV4 1616 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms