RNA–Protein interactions for RNA: ENST00000508386.1

KDM3B-205, Transcript of lysine demethylase 3B, humanhuman

TSL 4

Gene KDM3B, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-205ENST00000508386 CLTCQ00610 1675 aaKnown RBP9.59□□□□□ -0.87
KDM3B-205ENST00000508386 UBTFP17480 764 aaKnown RBP9.59□□□□□ -0.87
KDM3B-205ENST00000508386 SPINK5Q9NQ38 1064 aaPredicted RBP9.59□□□□□ -0.87
KDM3B-205ENST00000508386 RGS17Q9UGC6 210 aaPredicted RBP9.59□□□□□ -0.87
KDM3B-205ENST00000508386 MYO3AQ8NEV4 1616 aa9.59□□□□□ -0.87
KDM3B-205ENST00000508386 ZNF142P52746 1687 aaPredicted RBP9.58□□□□□ -0.88
KDM3B-205ENST00000508386 FBXO31Q5XUX0 539 aaPredicted RBP9.58□□□□□ -0.88
KDM3B-205ENST00000508386 GGT6Q6P531 493 aa9.58□□□□□ -0.88
KDM3B-205ENST00000508386 ZNF777Q9ULD5 760 aaPredicted RBP9.58□□□□□ -0.88
KDM3B-205ENST00000508386 SUPT6HQ7KZ85 1726 aaKnown RBP9.58□□□□□ -0.88
KDM3B-205ENST00000508386 SPAG9O60271 1321 aaKnown RBP9.57□□□□□ -0.88
KDM3B-205ENST00000508386 CDC42BPAQ5VT25 1732 aa9.57□□□□□ -0.88
KDM3B-205ENST00000508386 PLXNC1O60486 1568 aa9.57□□□□□ -0.88
KDM3B-205ENST00000508386 NEURL4Q96JN8 1562 aa9.57□□□□□ -0.88
KDM3B-205ENST00000508386 GPATCH8Q9UKJ3 1502 aaKnown RBP9.56□□□□□ -0.88
KDM3B-205ENST00000508386 DNMT1P26358 1616 aaKnown RBP9.56□□□□□ -0.88
KDM3B-205ENST00000508386 SHANK2Q9UPX8 1470 aa9.56□□□□□ -0.88
KDM3B-205ENST00000508386 TOM1O60784 492 aa9.56□□□□□ -0.88
KDM3B-205ENST00000508386 SYCP2Q9BX26 1530 aa9.56□□□□□ -0.88
KDM3B-205ENST00000508386 A2ML1A8K2U0 1454 aa9.55□□□□□ -0.88
KDM3B-205ENST00000508386 A2MP01023 1474 aa9.55□□□□□ -0.88
KDM3B-205ENST00000508386 VWDEQ8N2E2 1590 aa9.54□□□□□ -0.88
KDM3B-205ENST00000508386 CASKIN1Q8WXD9 1431 aa9.54□□□□□ -0.88
KDM3B-205ENST00000508386 ZNF644Q9H582 1327 aaPredicted RBP9.54□□□□□ -0.88
KDM3B-205ENST00000508386 ATP7AQ04656 1500 aa9.53□□□□□ -0.88
KDM3B-205ENST00000508386 CPS1P31327 1500 aa9.52□□□□□ -0.88
KDM3B-205ENST00000508386 ATXN8OSP0DMR3 200 aa9.52□□□□□ -0.89
KDM3B-205ENST00000508386 DSG3P32926 999 aa9.52□□□□□ -0.89
KDM3B-205ENST00000508386 INO80Q9ULG1 1556 aaPredicted RBP9.52□□□□□ -0.89
KDM3B-205ENST00000508386 KIAA1107Q9UPP5 1409 aa9.52□□□□□ -0.89
KDM3B-205ENST00000508386 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.51□□□□□ -0.89
KDM3B-205ENST00000508386 ZNF219Q9P2Y4 722 aaPredicted RBP9.51□□□□□ -0.89
KDM3B-205ENST00000508386 STRCP1A6NGW2 1772 aa9.5□□□□□ -0.89
KDM3B-205ENST00000508386 CFDP1Q9UEE9 299 aaPredicted RBP9.5□□□□□ -0.89
KDM3B-205ENST00000508386 TNRQ92752 1358 aa9.5□□□□□ -0.89
KDM3B-205ENST00000508386 CCDC18Q5T9S5 1454 aa9.49□□□□□ -0.89
KDM3B-205ENST00000508386 MBD5Q9P267 1494 aa9.49□□□□□ -0.89
KDM3B-205ENST00000508386 ANKLE2Q86XL3 938 aa9.49□□□□□ -0.89
KDM3B-205ENST00000508386 LRRC7Q96NW7 1537 aa9.49□□□□□ -0.89
KDM3B-205ENST00000508386 MED14O60244 1454 aa9.48□□□□□ -0.89
KDM3B-205ENST00000508386 POTEAQ6S8J7 498 aa9.48□□□□□ -0.89
KDM3B-205ENST00000508386 DHX29Q7Z478 1369 aaKnown RBP9.48□□□□□ -0.89
KDM3B-205ENST00000508386 POLR1AO95602 1720 aaPredicted RBP9.48□□□□□ -0.89
KDM3B-205ENST00000508386 NPHP4O75161 1426 aaPredicted RBP9.48□□□□□ -0.89
KDM3B-205ENST00000508386 SRCAPQ6ZRS2 3230 aa9.47□□□□□ -0.89
KDM3B-205ENST00000508386 MIA2Q96PC5 1412 aa9.47□□□□□ -0.89
KDM3B-205ENST00000508386 KIF3BO15066 747 aa9.46□□□□□ -0.9
KDM3B-205ENST00000508386 THEMISQ8N1K5 641 aaPredicted RBP9.46□□□□□ -0.9
KDM3B-205ENST00000508386 PZPP20742 1482 aa9.46□□□□□ -0.9
KDM3B-205ENST00000508386 PLEKHH2Q8IVE3 1493 aa9.45□□□□□ -0.9
KDM3B-205ENST00000508386 ADGBQ8N7X0 1667 aa9.45□□□□□ -0.9
KDM3B-205ENST00000508386 CCNB3Q8WWL7 1395 aa9.44□□□□□ -0.9
KDM3B-205ENST00000508386 FYCO1Q9BQS8 1478 aa9.44□□□□□ -0.9
KDM3B-205ENST00000508386 DEPDC5O75140 1603 aa9.43□□□□□ -0.9
KDM3B-205ENST00000508386 RTEL1-TNFRSF6BF6WH68 1400 aa9.43□□□□□ -0.9
KDM3B-205ENST00000508386 WASHC2CQ9Y4E1 1318 aa9.43□□□□□ -0.9
KDM3B-205ENST00000508386 UGGT1Q9NYU2 1555 aa9.42□□□□□ -0.9
KDM3B-205ENST00000508386 LTKP29376 864 aa9.42□□□□□ -0.9
KDM3B-205ENST00000508386 NLRP1Q9C000 1473 aa9.41□□□□□ -0.9
KDM3B-205ENST00000508386 IQGAP1P46940 1657 aa9.41□□□□□ -0.9
KDM3B-205ENST00000508386 TIAM1Q13009 1591 aa9.41□□□□□ -0.9
KDM3B-205ENST00000508386 KDM5DQ9BY66 1539 aa9.41□□□□□ -0.9
KDM3B-205ENST00000508386 FAM135AQ9P2D6 1515 aa9.41□□□□□ -0.9
KDM3B-205ENST00000508386 XIRP1Q702N8 1843 aaKnown RBP9.4□□□□□ -0.9
KDM3B-205ENST00000508386 ATF5Q9Y2D1 282 aaPredicted RBP9.4□□□□□ -0.9
KDM3B-205ENST00000508386 ZC3H13Q5T200 1668 aaKnown RBP9.39□□□□□ -0.91
KDM3B-205ENST00000508386 RNF17Q9BXT8 1623 aaKnown RBP9.39□□□□□ -0.91
KDM3B-205ENST00000508386 NCOA2Q15596 1464 aa9.39□□□□□ -0.91
KDM3B-205ENST00000508386 FAM135BQ49AJ0 1406 aa9.38□□□□□ -0.91
KDM3B-205ENST00000508386 MTUS2Q5JR59 1369 aa9.37□□□□□ -0.91
KDM3B-205ENST00000508386 ABCB7O75027 752 aa9.37□□□□□ -0.91
KDM3B-205ENST00000508386 RBM33Q96EV2 1170 aaKnown RBP9.37□□□□□ -0.91
KDM3B-205ENST00000508386 ERVK-7P63135 1459 aa9.36□□□□□ -0.91
KDM3B-205ENST00000508386 TXNDC2Q86VQ3 553 aa9.36□□□□□ -0.91
KDM3B-205ENST00000508386 SYNMO15061 1565 aa9.36□□□□□ -0.91
KDM3B-205ENST00000508386 ABCC3O15438 1527 aa9.36□□□□□ -0.91
KDM3B-205ENST00000508386 CCDC141Q6ZP82 1450 aa9.35□□□□□ -0.91
KDM3B-205ENST00000508386 ARHGAP23Q9P227 1491 aa9.35□□□□□ -0.91
KDM3B-205ENST00000508386 SETD1AO15047 1707 aaKnown RBP9.35□□□□□ -0.91
KDM3B-205ENST00000508386 CFAP65Q6ZU64 1925 aaKnown RBP9.35□□□□□ -0.91
KDM3B-205ENST00000508386 SCAF11Q99590 1463 aaKnown RBP9.34□□□□□ -0.91
KDM3B-205ENST00000508386 UBR1Q8IWV7 1749 aa9.34□□□□□ -0.91
KDM3B-205ENST00000508386 CEP162Q5TB80 1403 aa9.34□□□□□ -0.91
KDM3B-205ENST00000508386 TMEM94Q12767 1356 aa9.34□□□□□ -0.91
KDM3B-205ENST00000508386 CAMSAP2Q08AD1 1489 aa9.34□□□□□ -0.91
KDM3B-205ENST00000508386 UPF1Q92900 1129 aaKnown RBP eCLIP9.33□□□□□ -0.92
KDM3B-205ENST00000508386 MROH1Q8NDA8 1641 aa9.33□□□□□ -0.92
KDM3B-205ENST00000508386 SLIT1O75093 1534 aa9.32□□□□□ -0.92
KDM3B-205ENST00000508386 RSPH4AQ5TD94 716 aa9.32□□□□□ -0.92
KDM3B-205ENST00000508386 MAP3K1Q13233 1512 aa9.31□□□□□ -0.92
KDM3B-205ENST00000508386 ROBO1Q9Y6N7 1651 aa9.3□□□□□ -0.92
KDM3B-205ENST00000508386 KCNA6P17658 529 aa9.3□□□□□ -0.92
KDM3B-205ENST00000508386 SLC26A8Q96RN1 970 aa9.3□□□□□ -0.92
KDM3B-205ENST00000508386 EHBP1L1Q8N3D4 1523 aa9.3□□□□□ -0.92
KDM3B-205ENST00000508386 TET3O43151 1660 aa9.29□□□□□ -0.92
KDM3B-205ENST00000508386 TMEM2Q9UHN6 1383 aa9.29□□□□□ -0.92
KDM3B-205ENST00000508386 TSPY4P0CV99 314 aa9.29□□□□□ -0.92
KDM3B-205ENST00000508386 TSPY10P0CW01 314 aa9.29□□□□□ -0.92
KDM3B-205ENST00000508386 PROSER2Q86WR7 435 aaPredicted RBP9.29□□□□□ -0.92
KDM3B-205ENST00000508386 ARHGEF5Q12774 1597 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms