RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 FER1L4A9Z1Z3 1794 aa12.63□□□□□ -0.39
UBE2D3-222ENST00000508238 SYCP2Q9BX26 1530 aa12.62□□□□□ -0.39
UBE2D3-222ENST00000508238 LMTK3Q96Q04 1460 aa12.62□□□□□ -0.39
UBE2D3-222ENST00000508238 TIAM1Q13009 1591 aa12.61□□□□□ -0.39
UBE2D3-222ENST00000508238 MAP3K1Q13233 1512 aa12.61□□□□□ -0.39
UBE2D3-222ENST00000508238 ZNF644Q9H582 1327 aaPredicted RBP12.61□□□□□ -0.39
UBE2D3-222ENST00000508238 NCOA2Q15596 1464 aa12.6□□□□□ -0.39
UBE2D3-222ENST00000508238 MBD5Q9P267 1494 aa12.6□□□□□ -0.39
UBE2D3-222ENST00000508238 RSPH4AQ5TD94 716 aa12.6□□□□□ -0.39
UBE2D3-222ENST00000508238 SUPT6HQ7KZ85 1726 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-222ENST00000508238 LRRC9Q6ZRR7 1453 aa12.58□□□□□ -0.4
UBE2D3-222ENST00000508238 ATP7AQ04656 1500 aa12.57□□□□□ -0.4
UBE2D3-222ENST00000508238 RTEL1-TNFRSF6BF6WH68 1400 aa12.57□□□□□ -0.4
UBE2D3-222ENST00000508238 CEBPAP49715 358 aaPredicted RBP12.57□□□□□ -0.4
UBE2D3-222ENST00000508238 INO80Q9ULG1 1556 aaPredicted RBP12.56□□□□□ -0.4
UBE2D3-222ENST00000508238 CNTLNQ9NXG0 1405 aa12.56□□□□□ -0.4
UBE2D3-222ENST00000508238 A2MP01023 1474 aa12.55□□□□□ -0.4
UBE2D3-222ENST00000508238 KANK4Q5T7N3 995 aaPredicted RBP12.55□□□□□ -0.4
UBE2D3-222ENST00000508238 ESF1Q9H501 851 aaKnown RBP12.55□□□□□ -0.4
UBE2D3-222ENST00000508238 PLXNC1O60486 1568 aa12.54□□□□□ -0.4
UBE2D3-222ENST00000508238 HSPA2P54652 639 aa12.53□□□□□ -0.4
UBE2D3-222ENST00000508238 CAMSAP2Q08AD1 1489 aa12.53□□□□□ -0.4
UBE2D3-222ENST00000508238 DHX29Q7Z478 1369 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-222ENST00000508238 CCDC141Q6ZP82 1450 aa12.52□□□□□ -0.41
UBE2D3-222ENST00000508238 ADGBQ8N7X0 1667 aa12.51□□□□□ -0.41
UBE2D3-222ENST00000508238 CHRDL2Q6WN34 429 aa12.51□□□□□ -0.41
UBE2D3-222ENST00000508238 ZMYM3Q14202 1370 aa12.51□□□□□ -0.41
UBE2D3-222ENST00000508238 MIA2Q96PC5 1412 aa12.51□□□□□ -0.41
UBE2D3-222ENST00000508238 C3P01024 1663 aa12.51□□□□□ -0.41
UBE2D3-222ENST00000508238 PREX1Q8TCU6 1659 aa12.51□□□□□ -0.41
UBE2D3-222ENST00000508238 TSPY4P0CV99 314 aa12.5□□□□□ -0.41
UBE2D3-222ENST00000508238 TSPY10P0CW01 314 aa12.5□□□□□ -0.41
UBE2D3-222ENST00000508238 VASPP50552 380 aaPredicted RBP12.5□□□□□ -0.41
UBE2D3-222ENST00000508238 ILDR1Q86SU0 546 aaPredicted RBP12.5□□□□□ -0.41
UBE2D3-222ENST00000508238 ARHGEF5Q12774 1597 aa12.5□□□□□ -0.41
UBE2D3-222ENST00000508238 MROH2AA6NES4 1674 aa12.49□□□□□ -0.41
UBE2D3-222ENST00000508238 NPATQ14207 1427 aa12.49□□□□□ -0.41
UBE2D3-222ENST00000508238 MYOM3Q5VTT5 1437 aa12.48□□□□□ -0.41
UBE2D3-222ENST00000508238 UHRF1BP1Q6BDS2 1440 aa12.48□□□□□ -0.41
UBE2D3-222ENST00000508238 GGT6Q6P531 493 aa12.48□□□□□ -0.41
UBE2D3-222ENST00000508238 AKT1S1Q96B36 256 aa12.47□□□□□ -0.41
UBE2D3-222ENST00000508238 KIF3BO15066 747 aa12.45□□□□□ -0.42
UBE2D3-222ENST00000508238 STAG3Q9UJ98 1225 aa12.44□□□□□ -0.42
UBE2D3-222ENST00000508238 PTPRKQ15262 1439 aa12.44□□□□□ -0.42
UBE2D3-222ENST00000508238 MAST1Q9Y2H9 1570 aa12.43□□□□□ -0.42
UBE2D3-222ENST00000508238 FAM135AQ9P2D6 1515 aa12.43□□□□□ -0.42
UBE2D3-222ENST00000508238 CLTCQ00610 1675 aaKnown RBP12.43□□□□□ -0.42
UBE2D3-222ENST00000508238 STRCQ7RTU9 1775 aa12.43□□□□□ -0.42
UBE2D3-222ENST00000508238 AMER1Q5JTC6 1135 aaPredicted RBP12.42□□□□□ -0.42
UBE2D3-222ENST00000508238 FBXO41Q8TF61 875 aa12.42□□□□□ -0.42
UBE2D3-222ENST00000508238 RTN4Q9NQC3 1192 aaKnown RBP12.42□□□□□ -0.42
UBE2D3-222ENST00000508238 WASHC2CQ9Y4E1 1318 aa12.39□□□□□ -0.43
UBE2D3-222ENST00000508238 PTPRTO14522 1441 aa12.39□□□□□ -0.43
UBE2D3-222ENST00000508238 ABCC5O15440 1437 aa12.38□□□□□ -0.43
UBE2D3-222ENST00000508238 NCOA1Q15788 1441 aa12.38□□□□□ -0.43
UBE2D3-222ENST00000508238 FGD6Q6ZV73 1430 aa12.38□□□□□ -0.43
UBE2D3-222ENST00000508238 TCOF1Q13428 1488 aaKnown RBP12.38□□□□□ -0.43
UBE2D3-222ENST00000508238 SHANK2Q9UPX8 1470 aa12.38□□□□□ -0.43
UBE2D3-222ENST00000508238 KDM5DQ9BY66 1539 aa12.37□□□□□ -0.43
UBE2D3-222ENST00000508238 REM2Q8IYK8 340 aaPredicted RBP12.37□□□□□ -0.43
UBE2D3-222ENST00000508238 CERKQ8TCT0 537 aa12.37□□□□□ -0.43
UBE2D3-222ENST00000508238 PTPN23Q9H3S7 1636 aa12.37□□□□□ -0.43
UBE2D3-222ENST00000508238 PZPP20742 1482 aa12.36□□□□□ -0.43
UBE2D3-222ENST00000508238 FBXO31Q5XUX0 539 aaPredicted RBP12.36□□□□□ -0.43
UBE2D3-222ENST00000508238 IFNLR1Q8IU57 520 aaPredicted RBP12.36□□□□□ -0.43
UBE2D3-222ENST00000508238 RNF17Q9BXT8 1623 aaKnown RBP12.36□□□□□ -0.43
UBE2D3-222ENST00000508238 DUOX2Q9NRD8 1548 aa12.36□□□□□ -0.43
UBE2D3-222ENST00000508238 ZNF142P52746 1687 aaPredicted RBP12.35□□□□□ -0.43
UBE2D3-222ENST00000508238 PKD2Q13563 968 aa12.35□□□□□ -0.43
UBE2D3-222ENST00000508238 EIF2AK4Q9P2K8 1649 aaKnown RBP12.35□□□□□ -0.43
UBE2D3-222ENST00000508238 PLA2R1Q13018 1463 aa12.34□□□□□ -0.43
UBE2D3-222ENST00000508238 CAMSAP1Q5T5Y3 1602 aa12.34□□□□□ -0.43
UBE2D3-222ENST00000508238 MYO3AQ8NEV4 1616 aa12.34□□□□□ -0.43
UBE2D3-222ENST00000508238 TNRQ92752 1358 aa12.34□□□□□ -0.43
UBE2D3-222ENST00000508238 KIF15Q9NS87 1388 aa12.34□□□□□ -0.43
UBE2D3-222ENST00000508238 SPDYE1Q8NFV5 336 aaPredicted RBP12.34□□□□□ -0.43
UBE2D3-222ENST00000508238 DAPK1P53355 1430 aa12.34□□□□□ -0.43
UBE2D3-222ENST00000508238 CEP170BQ9Y4F5 1589 aaPredicted RBP12.34□□□□□ -0.43
UBE2D3-222ENST00000508238 A2ML1A8K2U0 1454 aa12.34□□□□□ -0.43
UBE2D3-222ENST00000508238 DNMT1P26358 1616 aaKnown RBP12.33□□□□□ -0.44
UBE2D3-222ENST00000508238 ABCC3O15438 1527 aa12.32□□□□□ -0.44
UBE2D3-222ENST00000508238 ERBINQ96RT1 1412 aa12.32□□□□□ -0.44
UBE2D3-222ENST00000508238 RRP7BPQ9NSQ0 103 aa12.32□□□□□ -0.44
UBE2D3-222ENST00000508238 CLEC11AQ9Y240 323 aa12.32□□□□□ -0.44
UBE2D3-222ENST00000508238 CROCC2H7BZ55 1655 aa12.32□□□□□ -0.44
UBE2D3-222ENST00000508238 ANKRD30AQ9BXX3 1397 aa12.31□□□□□ -0.44
UBE2D3-222ENST00000508238 MROH1Q8NDA8 1641 aa12.31□□□□□ -0.44
UBE2D3-222ENST00000508238 MIER1Q8N108 512 aa12.31□□□□□ -0.44
UBE2D3-222ENST00000508238 PLCD3Q8N3E9 789 aa12.31□□□□□ -0.44
UBE2D3-222ENST00000508238 NCKAP5LQ9HCH0 1330 aa12.31□□□□□ -0.44
UBE2D3-222ENST00000508238 ZC3H13Q5T200 1668 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-222ENST00000508238 NLRP1Q9C000 1473 aa12.3□□□□□ -0.44
UBE2D3-222ENST00000508238 THEMISQ8N1K5 641 aaPredicted RBP12.29□□□□□ -0.44
UBE2D3-222ENST00000508238 ARHGAP31Q2M1Z3 1444 aa12.28□□□□□ -0.44
UBE2D3-222ENST00000508238 CHIC2Q9UKJ5 165 aa12.28□□□□□ -0.44
UBE2D3-222ENST00000508238 CFAP65Q6ZU64 1925 aaKnown RBP12.28□□□□□ -0.44
UBE2D3-222ENST00000508238 LTBP4Q8N2S1 1624 aa12.28□□□□□ -0.44
UBE2D3-222ENST00000508238 ADGRL2O95490 1459 aa12.27□□□□□ -0.44
UBE2D3-222ENST00000508238 PRDM15P57071 1507 aaPredicted RBP12.27□□□□□ -0.44
UBE2D3-222ENST00000508238 SPATA31D1Q6ZQQ2 1576 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms