RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 A2MP01023 1474 aa15.09■□□□□ 0.01
CAST-220ENST00000508117 MED1Q15648 1581 aaPredicted RBP15.09■□□□□ 0.01
CAST-220ENST00000508117 PLEKHH2Q8IVE3 1493 aa15.08■□□□□ 0.01
CAST-220ENST00000508117 A2ML1A8K2U0 1454 aa15.08■□□□□ 0
CAST-220ENST00000508117 CPS1P31327 1500 aa15.07■□□□□ 0
CAST-220ENST00000508117 GPATCH8Q9UKJ3 1502 aaKnown RBP15.07■□□□□ 0
CAST-220ENST00000508117 TOM1O60784 492 aa15.06■□□□□ 0
CAST-220ENST00000508117 DNMT1P26358 1616 aaKnown RBP15.06■□□□□ 0
CAST-220ENST00000508117 HSPA1LP34931 641 aa15.05■□□□□ -0
CAST-220ENST00000508117 FYCO1Q9BQS8 1478 aa15.05■□□□□ -0
CAST-220ENST00000508117 ADGBQ8N7X0 1667 aa15.05■□□□□ -0
CAST-220ENST00000508117 POLR1AO95602 1720 aaPredicted RBP15.04■□□□□ -0
CAST-220ENST00000508117 HNRNPMP52272 730 aaKnown RBP eCLIP15.04■□□□□ -0
CAST-220ENST00000508117 ZNF777Q9ULD5 760 aaPredicted RBP15.04■□□□□ -0
CAST-220ENST00000508117 GGT6Q6P531 493 aa15.03■□□□□ -0
CAST-220ENST00000508117 NEURL4Q96JN8 1562 aa15.02□□□□□ -0.01
CAST-220ENST00000508117 SHANK2Q9UPX8 1470 aa15.01□□□□□ -0.01
CAST-220ENST00000508117 EHMT2Q96KQ7 1210 aa15.01□□□□□ -0.01
CAST-220ENST00000508117 FAM135AQ9P2D6 1515 aa15.01□□□□□ -0.01
CAST-220ENST00000508117 CFDP1Q9UEE9 299 aaPredicted RBP15□□□□□ -0.01
CAST-220ENST00000508117 RTEL1-TNFRSF6BF6WH68 1400 aa14.99□□□□□ -0.01
CAST-220ENST00000508117 SLC4A2P04920 1241 aa14.98□□□□□ -0.01
CAST-220ENST00000508117 CCNB3Q8WWL7 1395 aa14.98□□□□□ -0.01
CAST-220ENST00000508117 PIP4K2BP78356 416 aa14.97□□□□□ -0.01
CAST-220ENST00000508117 VWDEQ8N2E2 1590 aa14.97□□□□□ -0.01
CAST-220ENST00000508117 TNRQ92752 1358 aa14.97□□□□□ -0.01
CAST-220ENST00000508117 MED14O60244 1454 aa14.96□□□□□ -0.01
CAST-220ENST00000508117 PZPP20742 1482 aa14.96□□□□□ -0.01
CAST-220ENST00000508117 DHX29Q7Z478 1369 aaKnown RBP14.96□□□□□ -0.02
CAST-220ENST00000508117 DEPDC5O75140 1603 aa14.95□□□□□ -0.02
CAST-220ENST00000508117 ALKQ9UM73 1620 aa14.95□□□□□ -0.02
CAST-220ENST00000508117 MBD5Q9P267 1494 aa14.95□□□□□ -0.02
CAST-220ENST00000508117 ANKLE2Q86XL3 938 aa14.95□□□□□ -0.02
CAST-220ENST00000508117 NLRP1Q9C000 1473 aa14.94□□□□□ -0.02
CAST-220ENST00000508117 KDM5DQ9BY66 1539 aa14.93□□□□□ -0.02
CAST-220ENST00000508117 THEMISQ8N1K5 641 aaPredicted RBP14.93□□□□□ -0.02
CAST-220ENST00000508117 CAPN15O75808 1086 aa14.91□□□□□ -0.02
CAST-220ENST00000508117 FBXO31Q5XUX0 539 aaPredicted RBP14.91□□□□□ -0.02
CAST-220ENST00000508117 NPHP4O75161 1426 aaPredicted RBP14.91□□□□□ -0.02
CAST-220ENST00000508117 MIA2Q96PC5 1412 aa14.91□□□□□ -0.02
CAST-220ENST00000508117 UGGT1Q9NYU2 1555 aa14.9□□□□□ -0.02
CAST-220ENST00000508117 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.9□□□□□ -0.02
CAST-220ENST00000508117 TIAM1Q13009 1591 aa14.9□□□□□ -0.02
CAST-220ENST00000508117 MTUS2Q5JR59 1369 aa14.89□□□□□ -0.03
CAST-220ENST00000508117 IQGAP1P46940 1657 aa14.89□□□□□ -0.03
CAST-220ENST00000508117 KIF3BO15066 747 aa14.88□□□□□ -0.03
CAST-220ENST00000508117 SYNMO15061 1565 aa14.88□□□□□ -0.03
CAST-220ENST00000508117 ZNF644Q9H582 1327 aaPredicted RBP14.88□□□□□ -0.03
CAST-220ENST00000508117 RNF17Q9BXT8 1623 aaKnown RBP14.88□□□□□ -0.03
CAST-220ENST00000508117 RSPH4AQ5TD94 716 aa14.87□□□□□ -0.03
CAST-220ENST00000508117 SPINK5Q9NQ38 1064 aaPredicted RBP14.87□□□□□ -0.03
CAST-220ENST00000508117 WASHC2CQ9Y4E1 1318 aa14.87□□□□□ -0.03
CAST-220ENST00000508117 LRRC7Q96NW7 1537 aa14.87□□□□□ -0.03
CAST-220ENST00000508117 STRCP1A6NGW2 1772 aa14.85□□□□□ -0.03
CAST-220ENST00000508117 CEP162Q5TB80 1403 aa14.85□□□□□ -0.03
CAST-220ENST00000508117 CCDC141Q6ZP82 1450 aa14.85□□□□□ -0.03
CAST-220ENST00000508117 EHBP1L1Q8N3D4 1523 aa14.85□□□□□ -0.03
CAST-220ENST00000508117 RGS17Q9UGC6 210 aaPredicted RBP14.81□□□□□ -0.04
CAST-220ENST00000508117 ZC3H13Q5T200 1668 aaKnown RBP14.81□□□□□ -0.04
CAST-220ENST00000508117 ARHGEF5Q12774 1597 aa14.79□□□□□ -0.04
CAST-220ENST00000508117 CAMSAP2Q08AD1 1489 aa14.78□□□□□ -0.04
CAST-220ENST00000508117 APLP2Q06481 763 aa14.78□□□□□ -0.04
CAST-220ENST00000508117 ABCC3O15438 1527 aa14.77□□□□□ -0.04
CAST-220ENST00000508117 ERVK-7P63135 1459 aa14.76□□□□□ -0.05
CAST-220ENST00000508117 UBR1Q8IWV7 1749 aa14.76□□□□□ -0.05
CAST-220ENST00000508117 SCAF11Q99590 1463 aaKnown RBP14.76□□□□□ -0.05
CAST-220ENST00000508117 FAM135BQ49AJ0 1406 aa14.75□□□□□ -0.05
CAST-220ENST00000508117 EIF2AK4Q9P2K8 1649 aaKnown RBP14.75□□□□□ -0.05
CAST-220ENST00000508117 TSPY4P0CV99 314 aa14.75□□□□□ -0.05
CAST-220ENST00000508117 TSPY10P0CW01 314 aa14.75□□□□□ -0.05
CAST-220ENST00000508117 XIRP1Q702N8 1843 aaKnown RBP14.75□□□□□ -0.05
CAST-220ENST00000508117 ARHGAP23Q9P227 1491 aa14.75□□□□□ -0.05
CAST-220ENST00000508117 SLIT1O75093 1534 aa14.74□□□□□ -0.05
CAST-220ENST00000508117 NCOA2Q15596 1464 aa14.74□□□□□ -0.05
CAST-220ENST00000508117 MAST1Q9Y2H9 1570 aa14.73□□□□□ -0.05
CAST-220ENST00000508117 DSG3P32926 999 aa14.73□□□□□ -0.05
CAST-220ENST00000508117 MROH1Q8NDA8 1641 aa14.71□□□□□ -0.05
CAST-220ENST00000508117 LTKP29376 864 aa14.7□□□□□ -0.06
CAST-220ENST00000508117 SLC4A1APQ9BWU0 796 aaKnown RBP14.7□□□□□ -0.06
CAST-220ENST00000508117 ARHGAP31Q2M1Z3 1444 aa14.69□□□□□ -0.06
CAST-220ENST00000508117 CFAP65Q6ZU64 1925 aaKnown RBP14.68□□□□□ -0.06
CAST-220ENST00000508117 POTEAQ6S8J7 498 aa14.68□□□□□ -0.06
CAST-220ENST00000508117 SAMD1Q6SPF0 538 aaPredicted RBP14.68□□□□□ -0.06
CAST-220ENST00000508117 TXNDC2Q86VQ3 553 aa14.68□□□□□ -0.06
CAST-220ENST00000508117 CEP152O94986 1710 aa14.67□□□□□ -0.06
CAST-220ENST00000508117 KDM5AP29375 1690 aaKnown RBP14.66□□□□□ -0.06
CAST-220ENST00000508117 EID1Q9Y6B2 187 aa14.66□□□□□ -0.06
CAST-220ENST00000508117 ZNF219Q9P2Y4 722 aaPredicted RBP14.65□□□□□ -0.06
CAST-220ENST00000508117 ROBO1Q9Y6N7 1651 aa14.65□□□□□ -0.06
CAST-220ENST00000508117 LRRC9Q6ZRR7 1453 aa14.64□□□□□ -0.07
CAST-220ENST00000508117 TMEM2Q9UHN6 1383 aa14.64□□□□□ -0.07
CAST-220ENST00000508117 DUOX2Q9NRD8 1548 aa14.64□□□□□ -0.07
CAST-220ENST00000508117 TMEM94Q12767 1356 aa14.63□□□□□ -0.07
CAST-220ENST00000508117 PRDM15P57071 1507 aaPredicted RBP14.63□□□□□ -0.07
CAST-220ENST00000508117 KCNA6P17658 529 aa14.63□□□□□ -0.07
CAST-220ENST00000508117 MAP3K1Q13233 1512 aa14.62□□□□□ -0.07
CAST-220ENST00000508117 PIK3C2BO00750 1634 aa14.62□□□□□ -0.07
CAST-220ENST00000508117 TET3O43151 1660 aa14.61□□□□□ -0.07
CAST-220ENST00000508117 NKTRP30414 1462 aaKnown RBP14.6□□□□□ -0.07
CAST-220ENST00000508117 ERBINQ96RT1 1412 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms