RNA–Protein interactions for RNA: ENST00000508070.1

HMGCR-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 3

Gene HMGCR, Length 450 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-206ENST00000508070 MBD5Q9P267 1494 aa12.69□□□□□ -0.38
HMGCR-206ENST00000508070 TNRQ92752 1358 aa12.69□□□□□ -0.38
HMGCR-206ENST00000508070 SCAF1Q9H7N4 1312 aaKnown RBP12.68□□□□□ -0.38
HMGCR-206ENST00000508070 PIP4K2BP78356 416 aa12.68□□□□□ -0.38
HMGCR-206ENST00000508070 WASHC2CQ9Y4E1 1318 aa12.67□□□□□ -0.38
HMGCR-206ENST00000508070 CPS1P31327 1500 aa12.67□□□□□ -0.38
HMGCR-206ENST00000508070 ADGBQ8N7X0 1667 aa12.67□□□□□ -0.38
HMGCR-206ENST00000508070 DNMT1P26358 1616 aaKnown RBP12.66□□□□□ -0.38
HMGCR-206ENST00000508070 SHANK2Q9UPX8 1470 aa12.66□□□□□ -0.38
HMGCR-206ENST00000508070 MIA2Q96PC5 1412 aa12.64□□□□□ -0.39
HMGCR-206ENST00000508070 PZPP20742 1482 aa12.64□□□□□ -0.39
HMGCR-206ENST00000508070 CEP162Q5TB80 1403 aa12.63□□□□□ -0.39
HMGCR-206ENST00000508070 TSPY4P0CV99 314 aa12.63□□□□□ -0.39
HMGCR-206ENST00000508070 TSPY10P0CW01 314 aa12.63□□□□□ -0.39
HMGCR-206ENST00000508070 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.63□□□□□ -0.39
HMGCR-206ENST00000508070 FAM135AQ9P2D6 1515 aa12.62□□□□□ -0.39
HMGCR-206ENST00000508070 NLRP1Q9C000 1473 aa12.61□□□□□ -0.39
HMGCR-206ENST00000508070 PHF23Q9BUL5 403 aaPredicted RBP12.61□□□□□ -0.39
HMGCR-206ENST00000508070 TIAM1Q13009 1591 aa12.6□□□□□ -0.39
HMGCR-206ENST00000508070 MED14O60244 1454 aa12.6□□□□□ -0.39
HMGCR-206ENST00000508070 NPHP4O75161 1426 aaPredicted RBP12.6□□□□□ -0.39
HMGCR-206ENST00000508070 NEURL4Q96JN8 1562 aa12.6□□□□□ -0.39
HMGCR-206ENST00000508070 CCDC141Q6ZP82 1450 aa12.59□□□□□ -0.39
HMGCR-206ENST00000508070 EHBP1L1Q8N3D4 1523 aa12.59□□□□□ -0.39
HMGCR-206ENST00000508070 KDM5DQ9BY66 1539 aa12.59□□□□□ -0.39
HMGCR-206ENST00000508070 MED1Q15648 1581 aaPredicted RBP12.59□□□□□ -0.39
HMGCR-206ENST00000508070 POLR1AO95602 1720 aaPredicted RBP12.57□□□□□ -0.4
HMGCR-206ENST00000508070 UGGT1Q9NYU2 1555 aa12.57□□□□□ -0.4
HMGCR-206ENST00000508070 VWDEQ8N2E2 1590 aa12.56□□□□□ -0.4
HMGCR-206ENST00000508070 DEPDC5O75140 1603 aa12.55□□□□□ -0.4
HMGCR-206ENST00000508070 NCOA2Q15596 1464 aa12.55□□□□□ -0.4
HMGCR-206ENST00000508070 CAMSAP2Q08AD1 1489 aa12.54□□□□□ -0.4
HMGCR-206ENST00000508070 LRRC7Q96NW7 1537 aa12.52□□□□□ -0.4
HMGCR-206ENST00000508070 TXNDC2Q86VQ3 553 aa12.52□□□□□ -0.41
HMGCR-206ENST00000508070 ARHGEF5Q12774 1597 aa12.52□□□□□ -0.41
HMGCR-206ENST00000508070 ALKQ9UM73 1620 aa12.51□□□□□ -0.41
HMGCR-206ENST00000508070 IQGAP1P46940 1657 aa12.49□□□□□ -0.41
HMGCR-206ENST00000508070 LTKP29376 864 aa12.49□□□□□ -0.41
HMGCR-206ENST00000508070 SENP3Q9H4L4 574 aaPredicted RBP12.49□□□□□ -0.41
HMGCR-206ENST00000508070 EID1Q9Y6B2 187 aa12.49□□□□□ -0.41
HMGCR-206ENST00000508070 ABCC3O15438 1527 aa12.48□□□□□ -0.41
HMGCR-206ENST00000508070 ERVK-7P63135 1459 aa12.48□□□□□ -0.41
HMGCR-206ENST00000508070 RGS17Q9UGC6 210 aaPredicted RBP12.47□□□□□ -0.41
HMGCR-206ENST00000508070 SCAF11Q99590 1463 aaKnown RBP12.46□□□□□ -0.41
HMGCR-206ENST00000508070 RNF17Q9BXT8 1623 aaKnown RBP12.46□□□□□ -0.41
HMGCR-206ENST00000508070 MAST1Q9Y2H9 1570 aa12.45□□□□□ -0.42
HMGCR-206ENST00000508070 ARHGAP23Q9P227 1491 aa12.45□□□□□ -0.42
HMGCR-206ENST00000508070 ARHGAP31Q2M1Z3 1444 aa12.45□□□□□ -0.42
HMGCR-206ENST00000508070 FAM135BQ49AJ0 1406 aa12.45□□□□□ -0.42
HMGCR-206ENST00000508070 ZC3H13Q5T200 1668 aaKnown RBP12.45□□□□□ -0.42
HMGCR-206ENST00000508070 SYNMO15061 1565 aa12.44□□□□□ -0.42
HMGCR-206ENST00000508070 STRCP1A6NGW2 1772 aa12.44□□□□□ -0.42
HMGCR-206ENST00000508070 SLIT1O75093 1534 aa12.43□□□□□ -0.42
HMGCR-206ENST00000508070 LRRC9Q6ZRR7 1453 aa12.43□□□□□ -0.42
HMGCR-206ENST00000508070 KCNA6P17658 529 aa12.43□□□□□ -0.42
HMGCR-206ENST00000508070 STAG3Q9UJ98 1225 aa12.43□□□□□ -0.42
HMGCR-206ENST00000508070 EIF2AK4Q9P2K8 1649 aaKnown RBP12.43□□□□□ -0.42
HMGCR-206ENST00000508070 MYOM3Q5VTT5 1437 aa12.43□□□□□ -0.42
HMGCR-206ENST00000508070 TMEM2Q9UHN6 1383 aa12.42□□□□□ -0.42
HMGCR-206ENST00000508070 DUOX2Q9NRD8 1548 aa12.42□□□□□ -0.42
HMGCR-206ENST00000508070 KANK4Q5T7N3 995 aaPredicted RBP12.41□□□□□ -0.42
HMGCR-206ENST00000508070 PROSER2Q86WR7 435 aaPredicted RBP12.41□□□□□ -0.42
HMGCR-206ENST00000508070 UBR1Q8IWV7 1749 aa12.41□□□□□ -0.42
HMGCR-206ENST00000508070 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.41□□□□□ -0.42
HMGCR-206ENST00000508070 IDI1Q13907 227 aa12.4□□□□□ -0.42
HMGCR-206ENST00000508070 RRP7BPQ9NSQ0 103 aa12.4□□□□□ -0.42
HMGCR-206ENST00000508070 CFAP65Q6ZU64 1925 aaKnown RBP12.4□□□□□ -0.42
HMGCR-206ENST00000508070 TMEM94Q12767 1356 aa12.4□□□□□ -0.42
HMGCR-206ENST00000508070 MROH1Q8NDA8 1641 aa12.4□□□□□ -0.42
HMGCR-206ENST00000508070 VPS8Q8N3P4 1428 aa12.39□□□□□ -0.43
HMGCR-206ENST00000508070 POTEAQ6S8J7 498 aa12.39□□□□□ -0.43
HMGCR-206ENST00000508070 KANK1Q14678 1352 aa12.39□□□□□ -0.43
HMGCR-206ENST00000508070 KIF15Q9NS87 1388 aa12.39□□□□□ -0.43
HMGCR-206ENST00000508070 MAP3K1Q13233 1512 aa12.38□□□□□ -0.43
HMGCR-206ENST00000508070 ERBINQ96RT1 1412 aa12.37□□□□□ -0.43
HMGCR-206ENST00000508070 SLC26A8Q96RN1 970 aa12.37□□□□□ -0.43
HMGCR-206ENST00000508070 SLC52A1Q9NWF4 448 aa12.36□□□□□ -0.43
HMGCR-206ENST00000508070 CEP152O94986 1710 aa12.36□□□□□ -0.43
HMGCR-206ENST00000508070 ABCC5O15440 1437 aa12.36□□□□□ -0.43
HMGCR-206ENST00000508070 HDGFP51858 240 aaKnown RBP12.35□□□□□ -0.43
HMGCR-206ENST00000508070 SLAIN2Q9P270 581 aa12.35□□□□□ -0.43
HMGCR-206ENST00000508070 PRDM15P57071 1507 aaPredicted RBP12.34□□□□□ -0.43
HMGCR-206ENST00000508070 BCANQ96GW7 911 aa12.34□□□□□ -0.43
HMGCR-206ENST00000508070 EFCAB6Q5THR3 1501 aa12.33□□□□□ -0.44
HMGCR-206ENST00000508070 XIRP1Q702N8 1843 aaKnown RBP12.33□□□□□ -0.44
HMGCR-206ENST00000508070 LOC105371045A0A1W2PR82 267 aa12.33□□□□□ -0.44
HMGCR-206ENST00000508070 APLP2Q06481 763 aa12.33□□□□□ -0.44
HMGCR-206ENST00000508070 RBM33Q96EV2 1170 aaKnown RBP12.33□□□□□ -0.44
HMGCR-206ENST00000508070 PIK3C2BO00750 1634 aa12.33□□□□□ -0.44
HMGCR-206ENST00000508070 TET3O43151 1660 aa12.32□□□□□ -0.44
HMGCR-206ENST00000508070 MSH6P52701 1360 aa12.32□□□□□ -0.44
HMGCR-206ENST00000508070 ANKRD30AQ9BXX3 1397 aa12.32□□□□□ -0.44
HMGCR-206ENST00000508070 CHIC2Q9UKJ5 165 aa12.31□□□□□ -0.44
HMGCR-206ENST00000508070 KDM5AP29375 1690 aaKnown RBP12.31□□□□□ -0.44
HMGCR-206ENST00000508070 LMTK2Q8IWU2 1503 aa12.31□□□□□ -0.44
HMGCR-206ENST00000508070 JCADQ9P266 1359 aa12.3□□□□□ -0.44
HMGCR-206ENST00000508070 NOS1P29475 1434 aa12.3□□□□□ -0.44
HMGCR-206ENST00000508070 NKTRP30414 1462 aaKnown RBP12.3□□□□□ -0.44
HMGCR-206ENST00000508070 DAPK1P53355 1430 aa12.29□□□□□ -0.44
HMGCR-206ENST00000508070 TBX22Q9Y458 520 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms