RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 BCORL1Q5H9F3 1711 aa20.37■□□□□ 0.85
UBE2D3-221ENST00000507845 GCC2Q8IWJ2 1684 aa20.37■□□□□ 0.85
UBE2D3-221ENST00000507845 EIF2AK4Q9P2K8 1649 aaKnown RBP20.36■□□□□ 0.85
UBE2D3-221ENST00000507845 ERBINQ96RT1 1412 aa20.34■□□□□ 0.85
UBE2D3-221ENST00000507845 TRIM26Q12899 539 aaPredicted RBP20.32■□□□□ 0.84
UBE2D3-221ENST00000507845 NAIPQ13075 1403 aa20.32■□□□□ 0.84
UBE2D3-221ENST00000507845 ARID4BQ4LE39 1312 aaPredicted RBP20.31■□□□□ 0.84
UBE2D3-221ENST00000507845 HFM1A2PYH4 1435 aa20.31■□□□□ 0.84
UBE2D3-221ENST00000507845 ANKRD50Q9ULJ7 1429 aa20.31■□□□□ 0.84
UBE2D3-221ENST00000507845 RNF17Q9BXT8 1623 aaKnown RBP20.31■□□□□ 0.84
UBE2D3-221ENST00000507845 NCBP3Q53F19 620 aaKnown RBP20.28■□□□□ 0.84
UBE2D3-221ENST00000507845 DEPDC5O75140 1603 aa20.27■□□□□ 0.84
UBE2D3-221ENST00000507845 ADAMTSL3P82987 1691 aa20.27■□□□□ 0.84
UBE2D3-221ENST00000507845 KIF3BO15066 747 aa20.27■□□□□ 0.84
UBE2D3-221ENST00000507845 MROH1Q8NDA8 1641 aa20.26■□□□□ 0.83
UBE2D3-221ENST00000507845 HOXD11P31277 338 aaPredicted RBP20.25■□□□□ 0.83
UBE2D3-221ENST00000507845 FER1L4A9Z1Z3 1794 aa20.24■□□□□ 0.83
UBE2D3-221ENST00000507845 MLECQ14165 292 aa20.24■□□□□ 0.83
UBE2D3-221ENST00000507845 UNC13BO14795 1591 aa20.23■□□□□ 0.83
UBE2D3-221ENST00000507845 PRDM15P57071 1507 aaPredicted RBP20.22■□□□□ 0.83
UBE2D3-221ENST00000507845 MADDQ8WXG6 1647 aa20.22■□□□□ 0.83
UBE2D3-221ENST00000507845 SETD5Q9C0A6 1442 aa20.21■□□□□ 0.83
UBE2D3-221ENST00000507845 GGT6Q6P531 493 aa20.21■□□□□ 0.83
UBE2D3-221ENST00000507845 RNF216Q9NWF9 866 aaPredicted RBP20.2■□□□□ 0.82
UBE2D3-221ENST00000507845 CLTCQ00610 1675 aaKnown RBP20.19■□□□□ 0.82
UBE2D3-221ENST00000507845 CEP152O94986 1710 aa20.19■□□□□ 0.82
UBE2D3-221ENST00000507845 FAM135AQ9P2D6 1515 aa20.18■□□□□ 0.82
UBE2D3-221ENST00000507845 VWDEQ8N2E2 1590 aa20.18■□□□□ 0.82
UBE2D3-221ENST00000507845 ZC3H13Q5T200 1668 aaKnown RBP20.18■□□□□ 0.82
UBE2D3-221ENST00000507845 RIMS1Q86UR5 1692 aaKnown RBP20.18■□□□□ 0.82
UBE2D3-221ENST00000507845 KDM5DQ9BY66 1539 aa20.17■□□□□ 0.82
UBE2D3-221ENST00000507845 MROH2AA6NES4 1674 aa20.16■□□□□ 0.82
UBE2D3-221ENST00000507845 KDM4FA0A1W2PPD8 638 aa20.15■□□□□ 0.82
UBE2D3-221ENST00000507845 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.15■□□□□ 0.82
UBE2D3-221ENST00000507845 RAB3GAP2Q9H2M9 1393 aa20.15■□□□□ 0.82
UBE2D3-221ENST00000507845 ABCC3O15438 1527 aa20.15■□□□□ 0.82
UBE2D3-221ENST00000507845 IQGAP3Q86VI3 1631 aa20.14■□□□□ 0.81
UBE2D3-221ENST00000507845 CNTLNQ9NXG0 1405 aa20.13■□□□□ 0.81
UBE2D3-221ENST00000507845 KANK1Q14678 1352 aa20.12■□□□□ 0.81
UBE2D3-221ENST00000507845 CAMSAP1Q5T5Y3 1602 aa20.12■□□□□ 0.81
UBE2D3-221ENST00000507845 WASHC2CQ9Y4E1 1318 aa20.11■□□□□ 0.81
UBE2D3-221ENST00000507845 DCAF8L1A6NGE4 600 aa20.11■□□□□ 0.81
UBE2D3-221ENST00000507845 LMTK2Q8IWU2 1503 aa20.11■□□□□ 0.81
UBE2D3-221ENST00000507845 C3P01024 1663 aa20.1■□□□□ 0.81
UBE2D3-221ENST00000507845 ESF1Q9H501 851 aaKnown RBP20.1■□□□□ 0.81
UBE2D3-221ENST00000507845 TET3O43151 1660 aa20.1■□□□□ 0.81
UBE2D3-221ENST00000507845 NUP155O75694 1391 aa20.09■□□□□ 0.81
UBE2D3-221ENST00000507845 PCGF6Q9BYE7 350 aa20.08■□□□□ 0.81
UBE2D3-221ENST00000507845 PTPRMP28827 1452 aa20.07■□□□□ 0.8
UBE2D3-221ENST00000507845 HRCP23327 699 aa20.07■□□□□ 0.8
UBE2D3-221ENST00000507845 CFAP65Q6ZU64 1925 aaKnown RBP20.06■□□□□ 0.8
UBE2D3-221ENST00000507845 NPM3O75607 178 aaKnown RBP20.06■□□□□ 0.8
UBE2D3-221ENST00000507845 KCNA4P22459 653 aa20.06■□□□□ 0.8
UBE2D3-221ENST00000507845 TRIM52Q96A61 297 aa20.06■□□□□ 0.8
UBE2D3-221ENST00000507845 EFCAB6Q5THR3 1501 aa20.06■□□□□ 0.8
UBE2D3-221ENST00000507845 PZPP20742 1482 aa20.05■□□□□ 0.8
UBE2D3-221ENST00000507845 ACIN1Q9UKV3 1341 aaKnown RBP20.05■□□□□ 0.8
UBE2D3-221ENST00000507845 ZMYM3Q14202 1370 aa20.05■□□□□ 0.8
UBE2D3-221ENST00000507845 E9PCH4 1651 aa20.03■□□□□ 0.8
UBE2D3-221ENST00000507845 ARHGAP31Q2M1Z3 1444 aa20.02■□□□□ 0.8
UBE2D3-221ENST00000507845 NPATQ14207 1427 aa20.01■□□□□ 0.79
UBE2D3-221ENST00000507845 CEBPAP49715 358 aaPredicted RBP20■□□□□ 0.79
UBE2D3-221ENST00000507845 PREX1Q8TCU6 1659 aa20■□□□□ 0.79
UBE2D3-221ENST00000507845 RPRD2Q5VT52 1461 aaKnown RBP19.98■□□□□ 0.79
UBE2D3-221ENST00000507845 SLC4A1APQ9BWU0 796 aaKnown RBP19.97■□□□□ 0.79
UBE2D3-221ENST00000507845 SETD1BQ9UPS6 1966 aaKnown RBP19.97■□□□□ 0.79
UBE2D3-221ENST00000507845 ERVK-7P63135 1459 aa19.96■□□□□ 0.79
UBE2D3-221ENST00000507845 SPATA31D1Q6ZQQ2 1576 aa19.95■□□□□ 0.78
UBE2D3-221ENST00000507845 MPHOSPH9Q99550 1183 aa19.95■□□□□ 0.78
UBE2D3-221ENST00000507845 SPHKAPQ2M3C7 1700 aa19.94■□□□□ 0.78
UBE2D3-221ENST00000507845 FBXO31Q5XUX0 539 aaPredicted RBP19.94■□□□□ 0.78
UBE2D3-221ENST00000507845 PKD2Q13563 968 aa19.93■□□□□ 0.78
UBE2D3-221ENST00000507845 NOS1P29475 1434 aa19.92■□□□□ 0.78
UBE2D3-221ENST00000507845 SYNMO15061 1565 aa19.91■□□□□ 0.78
UBE2D3-221ENST00000507845 TNRQ92752 1358 aa19.9■□□□□ 0.78
UBE2D3-221ENST00000507845 MYO3AQ8NEV4 1616 aa19.89■□□□□ 0.77
UBE2D3-221ENST00000507845 PTPRTO14522 1441 aa19.88■□□□□ 0.77
UBE2D3-221ENST00000507845 PIK3C2BO00750 1634 aa19.86■□□□□ 0.77
UBE2D3-221ENST00000507845 TRPM2O94759 1503 aa19.86■□□□□ 0.77
UBE2D3-221ENST00000507845 PLA2R1Q13018 1463 aa19.86■□□□□ 0.77
UBE2D3-221ENST00000507845 ZNF142P52746 1687 aaPredicted RBP19.85■□□□□ 0.77
UBE2D3-221ENST00000507845 DHX57Q6P158 1386 aaKnown RBP19.84■□□□□ 0.77
UBE2D3-221ENST00000507845 UGGT1Q9NYU2 1555 aa19.83■□□□□ 0.77
UBE2D3-221ENST00000507845 NLRP1Q9C000 1473 aa19.83■□□□□ 0.76
UBE2D3-221ENST00000507845 CLTCL1P53675 1640 aa19.82■□□□□ 0.76
UBE2D3-221ENST00000507845 UHRF1BP1Q6BDS2 1440 aa19.81■□□□□ 0.76
UBE2D3-221ENST00000507845 CEP170BQ9Y4F5 1589 aaPredicted RBP19.81■□□□□ 0.76
UBE2D3-221ENST00000507845 A2ML1A8K2U0 1454 aa19.79■□□□□ 0.76
UBE2D3-221ENST00000507845 MYO5BQ9ULV0 1848 aa19.79■□□□□ 0.76
UBE2D3-221ENST00000507845 SLC52A1Q9NWF4 448 aa19.79■□□□□ 0.76
UBE2D3-221ENST00000507845 ANKRD30BQ9BXX2 1392 aa19.79■□□□□ 0.76
UBE2D3-221ENST00000507845 UBR1Q8IWV7 1749 aa19.79■□□□□ 0.76
UBE2D3-221ENST00000507845 KIF1BO60333 1816 aa19.79■□□□□ 0.76
UBE2D3-221ENST00000507845 KDM5AP29375 1690 aaKnown RBP19.78■□□□□ 0.76
UBE2D3-221ENST00000507845 IDI1Q13907 227 aa19.78■□□□□ 0.76
UBE2D3-221ENST00000507845 LMTK3Q96Q04 1460 aa19.77■□□□□ 0.76
UBE2D3-221ENST00000507845 ADGRB3O60242 1522 aa19.76■□□□□ 0.75
UBE2D3-221ENST00000507845 TMEM131LA2VDJ0 1609 aa19.76■□□□□ 0.75
UBE2D3-221ENST00000507845 CCDC144AA2RUR9 1427 aa19.74■□□□□ 0.75
UBE2D3-221ENST00000507845 STAG3Q9UJ98 1225 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms