RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 CDC42BPAQ5VT25 1732 aa14.79□□□□□ -0.04
RPS3A-206ENST00000507485 STAG3Q9UJ98 1225 aa14.79□□□□□ -0.04
RPS3A-206ENST00000507485 CCDC18Q5T9S5 1454 aa14.79□□□□□ -0.04
RPS3A-206ENST00000507485 MLH3Q9UHC1 1453 aa14.78□□□□□ -0.04
RPS3A-206ENST00000507485 REREQ9P2R6 1566 aa14.77□□□□□ -0.04
RPS3A-206ENST00000507485 KIDINS220Q9ULH0 1771 aa14.77□□□□□ -0.05
RPS3A-206ENST00000507485 ZNF579Q8NAF0 562 aaKnown RBP14.76□□□□□ -0.05
RPS3A-206ENST00000507485 DCBLD2Q96PD2 775 aa14.76□□□□□ -0.05
RPS3A-206ENST00000507485 FYCO1Q9BQS8 1478 aa14.76□□□□□ -0.05
RPS3A-206ENST00000507485 PREX1Q8TCU6 1659 aa14.76□□□□□ -0.05
RPS3A-206ENST00000507485 SAMD9LQ8IVG5 1584 aa14.74□□□□□ -0.05
RPS3A-206ENST00000507485 C3P01024 1663 aa14.73□□□□□ -0.05
RPS3A-206ENST00000507485 STRCQ7RTU9 1775 aa14.73□□□□□ -0.05
RPS3A-206ENST00000507485 AGLP35573 1532 aa14.73□□□□□ -0.05
RPS3A-206ENST00000507485 MYT1LQ9UL68 1186 aa14.72□□□□□ -0.05
RPS3A-206ENST00000507485 GPATCH8Q9UKJ3 1502 aaKnown RBP14.72□□□□□ -0.05
RPS3A-206ENST00000507485 ZRANB1Q9UGI0 708 aa14.71□□□□□ -0.05
RPS3A-206ENST00000507485 SYCP2Q9BX26 1530 aa14.71□□□□□ -0.06
RPS3A-206ENST00000507485 CREBZFQ9NS37 354 aa14.71□□□□□ -0.06
RPS3A-206ENST00000507485 ZNF777Q9ULD5 760 aaPredicted RBP14.68□□□□□ -0.06
RPS3A-206ENST00000507485 HNRNPMP52272 730 aaKnown RBP eCLIP14.67□□□□□ -0.063e-8■■■□□ 16.8
RPS3A-206ENST00000507485 CERKQ8TCT0 537 aa14.67□□□□□ -0.06
RPS3A-206ENST00000507485 UHRF1BP1Q6BDS2 1440 aa14.67□□□□□ -0.06
RPS3A-206ENST00000507485 SETD1BQ9UPS6 1966 aaKnown RBP14.65□□□□□ -0.06
RPS3A-206ENST00000507485 INO80Q9ULG1 1556 aaPredicted RBP14.65□□□□□ -0.06
RPS3A-206ENST00000507485 SUPT6HQ7KZ85 1726 aaKnown RBP14.65□□□□□ -0.06
RPS3A-206ENST00000507485 ATP7AQ04656 1500 aa14.64□□□□□ -0.07
RPS3A-206ENST00000507485 PLXNC1O60486 1568 aa14.63□□□□□ -0.07
RPS3A-206ENST00000507485 TIAM1Q13009 1591 aa14.63□□□□□ -0.07
RPS3A-206ENST00000507485 SPDYE4A6NLX3 237 aa14.62□□□□□ -0.07
RPS3A-206ENST00000507485 SPAG9O60271 1321 aaKnown RBP14.62□□□□□ -0.07
RPS3A-206ENST00000507485 ZNF644Q9H582 1327 aaPredicted RBP14.62□□□□□ -0.07
RPS3A-206ENST00000507485 KIAA1107Q9UPP5 1409 aa14.62□□□□□ -0.07
RPS3A-206ENST00000507485 CCNB3Q8WWL7 1395 aa14.61□□□□□ -0.07
RPS3A-206ENST00000507485 CFDP1Q9UEE9 299 aaPredicted RBP14.61□□□□□ -0.07
RPS3A-206ENST00000507485 MROH2AA6NES4 1674 aa14.61□□□□□ -0.07
RPS3A-206ENST00000507485 CNTLNQ9NXG0 1405 aa14.59□□□□□ -0.07
RPS3A-206ENST00000507485 CLTCQ00610 1675 aaKnown RBP14.59□□□□□ -0.07
RPS3A-206ENST00000507485 MTUS2Q5JR59 1369 aa14.59□□□□□ -0.07
RPS3A-206ENST00000507485 A2MP01023 1474 aa14.58□□□□□ -0.07
RPS3A-206ENST00000507485 MBD5Q9P267 1494 aa14.58□□□□□ -0.07
RPS3A-206ENST00000507485 PTPRTO14522 1441 aa14.58□□□□□ -0.08
RPS3A-206ENST00000507485 NCOA1Q15788 1441 aa14.58□□□□□ -0.08
RPS3A-206ENST00000507485 PLEKHH2Q8IVE3 1493 aa14.58□□□□□ -0.08
RPS3A-206ENST00000507485 ZMYM3Q14202 1370 aa14.57□□□□□ -0.08
RPS3A-206ENST00000507485 PAK3O75914 559 aaPredicted RBP14.57□□□□□ -0.08
RPS3A-206ENST00000507485 ESF1Q9H501 851 aaKnown RBP14.57□□□□□ -0.08
RPS3A-206ENST00000507485 LTBP4Q8N2S1 1624 aa14.57□□□□□ -0.08
RPS3A-206ENST00000507485 EHBP1L1Q8N3D4 1523 aa14.57□□□□□ -0.08
RPS3A-206ENST00000507485 CEP162Q5TB80 1403 aa14.56□□□□□ -0.08
RPS3A-206ENST00000507485 NPATQ14207 1427 aa14.56□□□□□ -0.08
RPS3A-206ENST00000507485 CAMSAP1Q5T5Y3 1602 aa14.55□□□□□ -0.08
RPS3A-206ENST00000507485 GALR2O43603 387 aaPredicted RBP14.55□□□□□ -0.08
RPS3A-206ENST00000507485 PTPRKQ15262 1439 aa14.54□□□□□ -0.08
RPS3A-206ENST00000507485 ADGBQ8N7X0 1667 aa14.54□□□□□ -0.08
RPS3A-206ENST00000507485 MYO3AQ8NEV4 1616 aa14.54□□□□□ -0.08
RPS3A-206ENST00000507485 ZNF142P52746 1687 aaPredicted RBP14.52□□□□□ -0.08
RPS3A-206ENST00000507485 GGT6Q6P531 493 aa14.52□□□□□ -0.08
RPS3A-206ENST00000507485 NCKAP5LQ9HCH0 1330 aa14.51□□□□□ -0.09
RPS3A-206ENST00000507485 NCOA2Q15596 1464 aa14.5□□□□□ -0.09
RPS3A-206ENST00000507485 CEP170BQ9Y4F5 1589 aaPredicted RBP14.49□□□□□ -0.09
RPS3A-206ENST00000507485 CAMSAP2Q08AD1 1489 aa14.49□□□□□ -0.09
RPS3A-206ENST00000507485 RTEL1-TNFRSF6BF6WH68 1400 aa14.49□□□□□ -0.09
RPS3A-206ENST00000507485 DHX29Q7Z478 1369 aaKnown RBP14.47□□□□□ -0.09
RPS3A-206ENST00000507485 TCOF1Q13428 1488 aaKnown RBP14.47□□□□□ -0.09
RPS3A-206ENST00000507485 CCDC141Q6ZP82 1450 aa14.46□□□□□ -0.09
RPS3A-206ENST00000507485 ZNF335Q9H4Z2 1342 aaPredicted RBP14.46□□□□□ -0.1
RPS3A-206ENST00000507485 PLA2R1Q13018 1463 aa14.45□□□□□ -0.1
RPS3A-206ENST00000507485 DNMT1P26358 1616 aaKnown RBP14.44□□□□□ -0.1
RPS3A-206ENST00000507485 LOC105371045A0A1W2PR82 267 aa14.44□□□□□ -0.1
RPS3A-206ENST00000507485 FBXO31Q5XUX0 539 aaPredicted RBP14.44□□□□□ -0.1
RPS3A-206ENST00000507485 A2ML1A8K2U0 1454 aa14.43□□□□□ -0.1
RPS3A-206ENST00000507485 IQSEC2Q5JU85 1478 aa14.43□□□□□ -0.1
RPS3A-206ENST00000507485 ARHGEF5Q12774 1597 aa14.42□□□□□ -0.1
RPS3A-206ENST00000507485 KIF3BO15066 747 aa14.42□□□□□ -0.1
RPS3A-206ENST00000507485 PHF12Q96QT6 1004 aa14.42□□□□□ -0.1
RPS3A-206ENST00000507485 KDM5DQ9BY66 1539 aa14.41□□□□□ -0.1
RPS3A-206ENST00000507485 LRRC9Q6ZRR7 1453 aa14.41□□□□□ -0.1
RPS3A-206ENST00000507485 VPS8Q8N3P4 1428 aa14.41□□□□□ -0.1
RPS3A-206ENST00000507485 ILDR2Q71H61 639 aa14.41□□□□□ -0.1
RPS3A-206ENST00000507485 OTUD5Q96G74 571 aa14.41□□□□□ -0.1
RPS3A-206ENST00000507485 NEURL4Q96JN8 1562 aa14.4□□□□□ -0.1
RPS3A-206ENST00000507485 MNX1P50219 401 aaPredicted RBP14.4□□□□□ -0.1
RPS3A-206ENST00000507485 PKD2Q13563 968 aa14.4□□□□□ -0.1
RPS3A-206ENST00000507485 KANK4Q5T7N3 995 aaPredicted RBP14.4□□□□□ -0.1
RPS3A-206ENST00000507485 PZPP20742 1482 aa14.4□□□□□ -0.1
RPS3A-206ENST00000507485 TNRQ92752 1358 aa14.38□□□□□ -0.11
RPS3A-206ENST00000507485 PLSCR2Q9NRY7 297 aa14.38□□□□□ -0.11
RPS3A-206ENST00000507485 DISP3Q9P2K9 1392 aa14.37□□□□□ -0.11
RPS3A-206ENST00000507485 POLR1AO95602 1720 aaPredicted RBP14.37□□□□□ -0.11
RPS3A-206ENST00000507485 FAM135AQ9P2D6 1515 aa14.36□□□□□ -0.11
RPS3A-206ENST00000507485 MAST1Q9Y2H9 1570 aa14.36□□□□□ -0.11
RPS3A-206ENST00000507485 MROH1Q8NDA8 1641 aa14.36□□□□□ -0.11
RPS3A-206ENST00000507485 RNF17Q9BXT8 1623 aaKnown RBP14.36□□□□□ -0.11
RPS3A-206ENST00000507485 RSPH4AQ5TD94 716 aa14.36□□□□□ -0.11
RPS3A-206ENST00000507485 SPATA31D1Q6ZQQ2 1576 aa14.35□□□□□ -0.11
RPS3A-206ENST00000507485 POTEB2H3BUK9 544 aa14.35□□□□□ -0.11
RPS3A-206ENST00000507485 WASHC2CQ9Y4E1 1318 aa14.34□□□□□ -0.11
RPS3A-206ENST00000507485 MIA2Q96PC5 1412 aa14.34□□□□□ -0.11
RPS3A-206ENST00000507485 ABCC3O15438 1527 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms