RNA–Protein interactions for RNA: ENST00000507046.5

DDR1-259, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-259ENST00000507046 NCOA1Q15788 1441 aa30.36■■■□□ 2.45
DDR1-259ENST00000507046 FAM135AQ9P2D6 1515 aa30.36■■■□□ 2.45
DDR1-259ENST00000507046 RNF17Q9BXT8 1623 aaKnown RBP30.36■■■□□ 2.45
DDR1-259ENST00000507046 CLTCQ00610 1675 aaKnown RBP30.36■■■□□ 2.45
DDR1-259ENST00000507046 C3P01024 1663 aa30.34■■■□□ 2.45
DDR1-259ENST00000507046 KDM5DQ9BY66 1539 aa30.32■■■□□ 2.44
DDR1-259ENST00000507046 PTPRKQ15262 1439 aa30.3■■■□□ 2.44
DDR1-259ENST00000507046 CEBPAP49715 358 aaPredicted RBP30.3■■■□□ 2.44
DDR1-259ENST00000507046 ITGAEP38570 1179 aa30.28■■■□□ 2.44
DDR1-259ENST00000507046 ROCK1Q13464 1354 aa30.27■■■□□ 2.44
DDR1-259ENST00000507046 ZMYM3Q14202 1370 aa30.27■■■□□ 2.44
DDR1-259ENST00000507046 ZC3H13Q5T200 1668 aaKnown RBP30.25■■■□□ 2.43
DDR1-259ENST00000507046 WASHC2CQ9Y4E1 1318 aa30.24■■■□□ 2.43
DDR1-259ENST00000507046 MROH1Q8NDA8 1641 aa30.24■■■□□ 2.43
DDR1-259ENST00000507046 PRDM15P57071 1507 aaPredicted RBP30.22■■■□□ 2.43
DDR1-259ENST00000507046 ANKRD50Q9ULJ7 1429 aa30.22■■■□□ 2.43
DDR1-259ENST00000507046 PREX1Q8TCU6 1659 aa30.21■■■□□ 2.43
DDR1-259ENST00000507046 DEPDC5O75140 1603 aa30.21■■■□□ 2.43
DDR1-259ENST00000507046 NPATQ14207 1427 aa30.2■■■□□ 2.42
DDR1-259ENST00000507046 LMTK3Q96Q04 1460 aa30.19■■■□□ 2.42
DDR1-259ENST00000507046 ABCC3O15438 1527 aa30.19■■■□□ 2.42
DDR1-259ENST00000507046 UHRF1BP1Q6BDS2 1440 aa30.16■■■□□ 2.42
DDR1-259ENST00000507046 KANK1Q14678 1352 aa30.15■■■□□ 2.42
DDR1-259ENST00000507046 PZPP20742 1482 aa30.14■■■□□ 2.42
DDR1-259ENST00000507046 CEP152O94986 1710 aa30.14■■■□□ 2.42
DDR1-259ENST00000507046 SETD1BQ9UPS6 1966 aaKnown RBP30.14■■■□□ 2.42
DDR1-259ENST00000507046 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.12■■■□□ 2.41
DDR1-259ENST00000507046 CAMSAP1Q5T5Y3 1602 aa30.11■■■□□ 2.41
DDR1-259ENST00000507046 VWDEQ8N2E2 1590 aa30.07■■■□□ 2.4
DDR1-259ENST00000507046 UNC13BO14795 1591 aa30.06■■■□□ 2.4
DDR1-259ENST00000507046 MYO3AQ8NEV4 1616 aa30.05■■■□□ 2.4
DDR1-259ENST00000507046 LMTK2Q8IWU2 1503 aa30.04■■■□□ 2.4
DDR1-259ENST00000507046 GCC2Q8IWJ2 1684 aa30.03■■■□□ 2.4
DDR1-259ENST00000507046 TNRQ92752 1358 aa30.02■■■□□ 2.4
DDR1-259ENST00000507046 ARHGAP31Q2M1Z3 1444 aa30■■■□□ 2.39
DDR1-259ENST00000507046 HSPA2P54652 639 aa30■■■□□ 2.39
DDR1-259ENST00000507046 FBXO31Q5XUX0 539 aaPredicted RBP30■■■□□ 2.39
DDR1-259ENST00000507046 ZNF142P52746 1687 aaPredicted RBP30■■■□□ 2.39
DDR1-259ENST00000507046 SPATA31D1Q6ZQQ2 1576 aa29.98■■■□□ 2.39
DDR1-259ENST00000507046 NAIPQ13075 1403 aa29.98■■■□□ 2.39
DDR1-259ENST00000507046 ERVK-7P63135 1459 aa29.98■■■□□ 2.39
DDR1-259ENST00000507046 HFM1A2PYH4 1435 aa29.97■■■□□ 2.39
DDR1-259ENST00000507046 CEP170BQ9Y4F5 1589 aaPredicted RBP29.97■■■□□ 2.39
DDR1-259ENST00000507046 EFCAB6Q5THR3 1501 aa29.96■■■□□ 2.39
DDR1-259ENST00000507046 TET3O43151 1660 aa29.93■■■□□ 2.38
DDR1-259ENST00000507046 IQGAP3Q86VI3 1631 aa29.93■■■□□ 2.38
DDR1-259ENST00000507046 A2ML1A8K2U0 1454 aa29.92■■■□□ 2.38
DDR1-259ENST00000507046 NLRP1Q9C000 1473 aa29.92■■■□□ 2.38
DDR1-259ENST00000507046 NUP155O75694 1391 aa29.9■■■□□ 2.38
DDR1-259ENST00000507046 RPRD2Q5VT52 1461 aaKnown RBP29.87■■■□□ 2.37
DDR1-259ENST00000507046 CFAP65Q6ZU64 1925 aaKnown RBP29.86■■■□□ 2.37
DDR1-259ENST00000507046 UGGT1Q9NYU2 1555 aa29.81■■■□□ 2.36
DDR1-259ENST00000507046 PLA2R1Q13018 1463 aa29.8■■■□□ 2.36
DDR1-259ENST00000507046 NOS1P29475 1434 aa29.79■■■□□ 2.36
DDR1-259ENST00000507046 E9PCH4 1651 aa29.79■■■□□ 2.36
DDR1-259ENST00000507046 STRCQ7RTU9 1775 aa29.78■■■□□ 2.36
DDR1-259ENST00000507046 SYNMO15061 1565 aa29.77■■■□□ 2.36
DDR1-259ENST00000507046 TRIM52Q96A61 297 aa29.74■■■□□ 2.35
DDR1-259ENST00000507046 THEMISQ8N1K5 641 aaPredicted RBP29.73■■■□□ 2.35
DDR1-259ENST00000507046 DMRT2Q9Y5R5 561 aa29.73■■■□□ 2.35
DDR1-259ENST00000507046 UBR1Q8IWV7 1749 aa29.71■■■□□ 2.35
DDR1-259ENST00000507046 PIK3C2BO00750 1634 aa29.71■■■□□ 2.35
DDR1-259ENST00000507046 SETD5Q9C0A6 1442 aa29.71■■■□□ 2.35
DDR1-259ENST00000507046 PKD2Q13563 968 aa29.69■■■□□ 2.34
DDR1-259ENST00000507046 SLC52A1Q9NWF4 448 aa29.68■■■□□ 2.34
DDR1-259ENST00000507046 PTPRTO14522 1441 aa29.67■■■□□ 2.34
DDR1-259ENST00000507046 ACIN1Q9UKV3 1341 aaKnown RBP29.67■■■□□ 2.34
DDR1-259ENST00000507046 KDM5AP29375 1690 aaKnown RBP29.66■■■□□ 2.34
DDR1-259ENST00000507046 POLR1AO95602 1720 aaPredicted RBP29.66■■■□□ 2.34
DDR1-259ENST00000507046 STAG3Q9UJ98 1225 aa29.66■■■□□ 2.34
DDR1-259ENST00000507046 IDI1Q13907 227 aa29.65■■■□□ 2.34
DDR1-259ENST00000507046 NCKAP5LQ9HCH0 1330 aa29.65■■■□□ 2.34
DDR1-259ENST00000507046 ADGRB3O60242 1522 aa29.64■■■□□ 2.34
DDR1-259ENST00000507046 SPHKAPQ2M3C7 1700 aa29.63■■■□□ 2.33
DDR1-259ENST00000507046 ANKLE2Q86XL3 938 aa29.61■■■□□ 2.33
DDR1-259ENST00000507046 SLC4A1APQ9BWU0 796 aaKnown RBP29.61■■■□□ 2.33
DDR1-259ENST00000507046 RAB3GAP2Q9H2M9 1393 aa29.6■■■□□ 2.33
DDR1-259ENST00000507046 SLIT1O75093 1534 aa29.59■■■□□ 2.33
DDR1-259ENST00000507046 NEURL4Q96JN8 1562 aa29.58■■■□□ 2.33
DDR1-259ENST00000507046 ARHGAP23Q9P227 1491 aa29.56■■■□□ 2.32
DDR1-259ENST00000507046 TRPM2O94759 1503 aa29.55■■■□□ 2.32
DDR1-259ENST00000507046 TMEM2Q9UHN6 1383 aa29.54■■■□□ 2.32
DDR1-259ENST00000507046 SCAF11Q99590 1463 aaKnown RBP29.54■■■□□ 2.32
DDR1-259ENST00000507046 TMEM131LA2VDJ0 1609 aa29.53■■■□□ 2.32
DDR1-259ENST00000507046 MED14O60244 1454 aa29.52■■■□□ 2.32
DDR1-259ENST00000507046 EID1Q9Y6B2 187 aa29.51■■■□□ 2.31
DDR1-259ENST00000507046 NPHP4O75161 1426 aaPredicted RBP29.51■■■□□ 2.31
DDR1-259ENST00000507046 CHGAP10645 457 aaKnown RBP29.49■■■□□ 2.31
DDR1-259ENST00000507046 MPHOSPH9Q99550 1183 aa29.49■■■□□ 2.31
DDR1-259ENST00000507046 IQGAP1P46940 1657 aa29.49■■■□□ 2.31
DDR1-259ENST00000507046 TXNDC2Q86VQ3 553 aa29.48■■■□□ 2.31
DDR1-259ENST00000507046 MYO5BQ9ULV0 1848 aa29.48■■■□□ 2.31
DDR1-259ENST00000507046 CLTCL1P53675 1640 aa29.46■■■□□ 2.31
DDR1-259ENST00000507046 HRCP23327 699 aa29.44■■■□□ 2.3
DDR1-259ENST00000507046 LTKP29376 864 aa29.44■■■□□ 2.3
DDR1-259ENST00000507046 RIMS2Q9UQ26 1411 aa29.41■■■□□ 2.3
DDR1-259ENST00000507046 ZFYVE9O95405 1425 aa29.4■■■□□ 2.3
DDR1-259ENST00000507046 HDGFP51858 240 aaKnown RBP29.4■■■□□ 2.3
DDR1-259ENST00000507046 FOXD1Q16676 465 aa29.4■■■□□ 2.3
DDR1-259ENST00000507046 KIF1BO60333 1816 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms