RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 ZBTB12Q9Y330 459 aaPredicted RBP9.42□□□□□ -0.9
GYPB-208ENST00000507009 SAMD9LQ8IVG5 1584 aa9.41□□□□□ -0.9
GYPB-208ENST00000507009 CNTLNQ9NXG0 1405 aa9.41□□□□□ -0.9
GYPB-208ENST00000507009 ZNF335Q9H4Z2 1342 aaPredicted RBP9.41□□□□□ -0.9
GYPB-208ENST00000507009 GGT6Q6P531 493 aa9.41□□□□□ -0.9
GYPB-208ENST00000507009 CASKIN1Q8WXD9 1431 aa9.4□□□□□ -0.9
GYPB-208ENST00000507009 ZMYM3Q14202 1370 aa9.4□□□□□ -0.9
GYPB-208ENST00000507009 MROH2AA6NES4 1674 aa9.4□□□□□ -0.9
GYPB-208ENST00000507009 MYO3AQ8NEV4 1616 aa9.39□□□□□ -0.91
GYPB-208ENST00000507009 ATXN8OSP0DMR3 200 aa9.39□□□□□ -0.91
GYPB-208ENST00000507009 ATP7AQ04656 1500 aa9.38□□□□□ -0.91
GYPB-208ENST00000507009 A2MP01023 1474 aa9.37□□□□□ -0.91
GYPB-208ENST00000507009 IQSEC2Q5JU85 1478 aa9.37□□□□□ -0.91
GYPB-208ENST00000507009 FYCO1Q9BQS8 1478 aa9.37□□□□□ -0.91
GYPB-208ENST00000507009 CFDP1Q9UEE9 299 aaPredicted RBP9.37□□□□□ -0.91
GYPB-208ENST00000507009 NPATQ14207 1427 aa9.37□□□□□ -0.91
GYPB-208ENST00000507009 PIP4K2BP78356 416 aa9.36□□□□□ -0.91
GYPB-208ENST00000507009 CEP170BQ9Y4F5 1589 aaPredicted RBP9.36□□□□□ -0.91
GYPB-208ENST00000507009 CCNB3Q8WWL7 1395 aa9.36□□□□□ -0.91
GYPB-208ENST00000507009 GPATCH8Q9UKJ3 1502 aaKnown RBP9.36□□□□□ -0.91
GYPB-208ENST00000507009 ZNF142P52746 1687 aaPredicted RBP9.36□□□□□ -0.91
GYPB-208ENST00000507009 INO80Q9ULG1 1556 aaPredicted RBP9.35□□□□□ -0.91
GYPB-208ENST00000507009 PTPRKQ15262 1439 aa9.34□□□□□ -0.91
GYPB-208ENST00000507009 MTUS2Q5JR59 1369 aa9.34□□□□□ -0.91
GYPB-208ENST00000507009 ZNF644Q9H582 1327 aaPredicted RBP9.33□□□□□ -0.92
GYPB-208ENST00000507009 PKD2Q13563 968 aa9.33□□□□□ -0.92
GYPB-208ENST00000507009 PLEKHH2Q8IVE3 1493 aa9.33□□□□□ -0.92
GYPB-208ENST00000507009 PLXNC1O60486 1568 aa9.33□□□□□ -0.92
GYPB-208ENST00000507009 ADGBQ8N7X0 1667 aa9.32□□□□□ -0.92
GYPB-208ENST00000507009 CHRDL2Q6WN34 429 aa9.32□□□□□ -0.92
GYPB-208ENST00000507009 PLA2R1Q13018 1463 aa9.32□□□□□ -0.92
GYPB-208ENST00000507009 POLR1AO95602 1720 aaPredicted RBP9.31□□□□□ -0.92
GYPB-208ENST00000507009 HSPA1LP34931 641 aa9.31□□□□□ -0.92
GYPB-208ENST00000507009 AKT1S1Q96B36 256 aa9.31□□□□□ -0.92
GYPB-208ENST00000507009 TCOF1Q13428 1488 aaKnown RBP9.31□□□□□ -0.92
GYPB-208ENST00000507009 DNMT1P26358 1616 aaKnown RBP9.31□□□□□ -0.92
GYPB-208ENST00000507009 TIAM1Q13009 1591 aa9.3□□□□□ -0.92
GYPB-208ENST00000507009 A2ML1A8K2U0 1454 aa9.3□□□□□ -0.92
GYPB-208ENST00000507009 KIF3BO15066 747 aa9.3□□□□□ -0.92
GYPB-208ENST00000507009 FBXO31Q5XUX0 539 aaPredicted RBP9.3□□□□□ -0.92
GYPB-208ENST00000507009 KIAA1107Q9UPP5 1409 aa9.3□□□□□ -0.92
GYPB-208ENST00000507009 MED1Q15648 1581 aaPredicted RBP9.29□□□□□ -0.92
GYPB-208ENST00000507009 TNRQ92752 1358 aa9.28□□□□□ -0.92
GYPB-208ENST00000507009 TOM1O60784 492 aa9.28□□□□□ -0.92
GYPB-208ENST00000507009 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.27□□□□□ -0.93
GYPB-208ENST00000507009 WASHC2CQ9Y4E1 1318 aa9.27□□□□□ -0.93
GYPB-208ENST00000507009 NEURL4Q96JN8 1562 aa9.26□□□□□ -0.93
GYPB-208ENST00000507009 SHANK2Q9UPX8 1470 aa9.26□□□□□ -0.93
GYPB-208ENST00000507009 EHBP1L1Q8N3D4 1523 aa9.26□□□□□ -0.93
GYPB-208ENST00000507009 KDM5DQ9BY66 1539 aa9.26□□□□□ -0.93
GYPB-208ENST00000507009 DHX29Q7Z478 1369 aaKnown RBP9.25□□□□□ -0.93
GYPB-208ENST00000507009 ANKLE2Q86XL3 938 aa9.25□□□□□ -0.93
GYPB-208ENST00000507009 MBD5Q9P267 1494 aa9.25□□□□□ -0.93
GYPB-208ENST00000507009 CPS1P31327 1500 aa9.25□□□□□ -0.93
GYPB-208ENST00000507009 CAMSAP2Q08AD1 1489 aa9.24□□□□□ -0.93
GYPB-208ENST00000507009 UGGT1Q9NYU2 1555 aa9.24□□□□□ -0.93
GYPB-208ENST00000507009 RTEL1-TNFRSF6BF6WH68 1400 aa9.23□□□□□ -0.93
GYPB-208ENST00000507009 NPHP4O75161 1426 aaPredicted RBP9.23□□□□□ -0.93
GYPB-208ENST00000507009 PZPP20742 1482 aa9.23□□□□□ -0.93
GYPB-208ENST00000507009 CCDC141Q6ZP82 1450 aa9.23□□□□□ -0.93
GYPB-208ENST00000507009 FAM135AQ9P2D6 1515 aa9.23□□□□□ -0.93
GYPB-208ENST00000507009 REM2Q8IYK8 340 aaPredicted RBP9.23□□□□□ -0.93
GYPB-208ENST00000507009 THEMISQ8N1K5 641 aaPredicted RBP9.23□□□□□ -0.93
GYPB-208ENST00000507009 VWDEQ8N2E2 1590 aa9.22□□□□□ -0.93
GYPB-208ENST00000507009 IQGAP1P46940 1657 aa9.22□□□□□ -0.93
GYPB-208ENST00000507009 CEP162Q5TB80 1403 aa9.22□□□□□ -0.93
GYPB-208ENST00000507009 MIA2Q96PC5 1412 aa9.22□□□□□ -0.93
GYPB-208ENST00000507009 CFAP65Q6ZU64 1925 aaKnown RBP9.21□□□□□ -0.93
GYPB-208ENST00000507009 NCOA2Q15596 1464 aa9.21□□□□□ -0.94
GYPB-208ENST00000507009 TSPY4P0CV99 314 aa9.2□□□□□ -0.94
GYPB-208ENST00000507009 TSPY10P0CW01 314 aa9.2□□□□□ -0.94
GYPB-208ENST00000507009 NLRP1Q9C000 1473 aa9.2□□□□□ -0.94
GYPB-208ENST00000507009 STRCP1A6NGW2 1772 aa9.19□□□□□ -0.94
GYPB-208ENST00000507009 DEPDC5O75140 1603 aa9.19□□□□□ -0.94
GYPB-208ENST00000507009 ALKQ9UM73 1620 aa9.19□□□□□ -0.94
GYPB-208ENST00000507009 CEP152O94986 1710 aa9.19□□□□□ -0.94
GYPB-208ENST00000507009 RNF17Q9BXT8 1623 aaKnown RBP9.17□□□□□ -0.94
GYPB-208ENST00000507009 LRRC7Q96NW7 1537 aa9.17□□□□□ -0.94
GYPB-208ENST00000507009 ARHGEF5Q12774 1597 aa9.16□□□□□ -0.94
GYPB-208ENST00000507009 ABCC3O15438 1527 aa9.16□□□□□ -0.94
GYPB-208ENST00000507009 MED14O60244 1454 aa9.16□□□□□ -0.94
GYPB-208ENST00000507009 RSPH4AQ5TD94 716 aa9.16□□□□□ -0.94
GYPB-208ENST00000507009 ZC3H13Q5T200 1668 aaKnown RBP9.16□□□□□ -0.94
GYPB-208ENST00000507009 SYNMO15061 1565 aa9.16□□□□□ -0.94
GYPB-208ENST00000507009 ERVK-7P63135 1459 aa9.15□□□□□ -0.94
GYPB-208ENST00000507009 UBR1Q8IWV7 1749 aa9.15□□□□□ -0.94
GYPB-208ENST00000507009 PITPNM1O00562 1244 aa9.14□□□□□ -0.95
GYPB-208ENST00000507009 MKRN4PQ13434 485 aaPredicted RBP9.14□□□□□ -0.95
GYPB-208ENST00000507009 TXNDC2Q86VQ3 553 aa9.14□□□□□ -0.95
GYPB-208ENST00000507009 SPDYE2BA6NHP3 402 aa9.13□□□□□ -0.95
GYPB-208ENST00000507009 SPDYE6P0CI01 402 aa9.13□□□□□ -0.95
GYPB-208ENST00000507009 SPDYE2Q495Y8 402 aa9.13□□□□□ -0.95
GYPB-208ENST00000507009 STAG3Q9UJ98 1225 aa9.13□□□□□ -0.95
GYPB-208ENST00000507009 SCAF11Q99590 1463 aaKnown RBP9.13□□□□□ -0.95
GYPB-208ENST00000507009 MROH1Q8NDA8 1641 aa9.13□□□□□ -0.95
GYPB-208ENST00000507009 EIF2AK4Q9P2K8 1649 aaKnown RBP9.13□□□□□ -0.95
GYPB-208ENST00000507009 LTKP29376 864 aa9.12□□□□□ -0.95
GYPB-208ENST00000507009 RBM33Q96EV2 1170 aaKnown RBP9.12□□□□□ -0.95
GYPB-208ENST00000507009 EID1Q9Y6B2 187 aa9.12□□□□□ -0.95
GYPB-208ENST00000507009 XIRP1Q702N8 1843 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms