RNA–Protein interactions for RNA: ENST00000506827.1

ITGA3-209, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-209ENST00000506827 KANK1Q14678 1352 aa21.97■■□□□ 1.11
ITGA3-209ENST00000506827 TRIM52Q96A61 297 aa21.94■■□□□ 1.1
ITGA3-209ENST00000506827 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.94■■□□□ 1.1
ITGA3-209ENST00000506827 ESF1Q9H501 851 aaKnown RBP21.94■■□□□ 1.1
ITGA3-209ENST00000506827 BCORL1Q5H9F3 1711 aa21.94■■□□□ 1.1
ITGA3-209ENST00000506827 NUP155O75694 1391 aa21.92■■□□□ 1.1
ITGA3-209ENST00000506827 MLECQ14165 292 aa21.92■■□□□ 1.1
ITGA3-209ENST00000506827 WASHC2CQ9Y4E1 1318 aa21.91■■□□□ 1.1
ITGA3-209ENST00000506827 FAM135AQ9P2D6 1515 aa21.89■■□□□ 1.09
ITGA3-209ENST00000506827 RNF17Q9BXT8 1623 aaKnown RBP21.88■■□□□ 1.09
ITGA3-209ENST00000506827 PRDM15P57071 1507 aaPredicted RBP21.86■■□□□ 1.09
ITGA3-209ENST00000506827 CNTLNQ9NXG0 1405 aa21.86■■□□□ 1.09
ITGA3-209ENST00000506827 UNC13BO14795 1591 aa21.86■■□□□ 1.09
ITGA3-209ENST00000506827 DEPDC5O75140 1603 aa21.85■■□□□ 1.09
ITGA3-209ENST00000506827 KDM5DQ9BY66 1539 aa21.85■■□□□ 1.09
ITGA3-209ENST00000506827 SLC4A1APQ9BWU0 796 aaKnown RBP21.84■■□□□ 1.09
ITGA3-209ENST00000506827 SIGLEC1Q9BZZ2 1709 aa21.83■■□□□ 1.08
ITGA3-209ENST00000506827 MPHOSPH9Q99550 1183 aa21.82■■□□□ 1.08
ITGA3-209ENST00000506827 VWDEQ8N2E2 1590 aa21.81■■□□□ 1.08
ITGA3-209ENST00000506827 LMTK2Q8IWU2 1503 aa21.8■■□□□ 1.08
ITGA3-209ENST00000506827 MROH1Q8NDA8 1641 aa21.8■■□□□ 1.08
ITGA3-209ENST00000506827 ABCC3O15438 1527 aa21.78■■□□□ 1.08
ITGA3-209ENST00000506827 IQGAP3Q86VI3 1631 aa21.77■■□□□ 1.07
ITGA3-209ENST00000506827 ZMYM3Q14202 1370 aa21.76■■□□□ 1.07
ITGA3-209ENST00000506827 ARHGAP31Q2M1Z3 1444 aa21.76■■□□□ 1.07
ITGA3-209ENST00000506827 PZPP20742 1482 aa21.76■■□□□ 1.07
ITGA3-209ENST00000506827 ZC3H13Q5T200 1668 aaKnown RBP21.75■■□□□ 1.07
ITGA3-209ENST00000506827 PKD2Q13563 968 aa21.75■■□□□ 1.07
ITGA3-209ENST00000506827 RPRD2Q5VT52 1461 aaKnown RBP21.73■■□□□ 1.07
ITGA3-209ENST00000506827 ADAMTSL3P82987 1691 aa21.72■■□□□ 1.07
ITGA3-209ENST00000506827 TET3O43151 1660 aa21.69■■□□□ 1.06
ITGA3-209ENST00000506827 EFCAB6Q5THR3 1501 aa21.69■■□□□ 1.06
ITGA3-209ENST00000506827 KDM4FA0A1W2PPD8 638 aa21.68■■□□□ 1.06
ITGA3-209ENST00000506827 NPATQ14207 1427 aa21.68■■□□□ 1.06
ITGA3-209ENST00000506827 DHX57Q6P158 1386 aaKnown RBP21.67■■□□□ 1.06
ITGA3-209ENST00000506827 MADDQ8WXG6 1647 aa21.66■■□□□ 1.06
ITGA3-209ENST00000506827 MROH2AA6NES4 1674 aa21.66■■□□□ 1.06
ITGA3-209ENST00000506827 CLTCQ00610 1675 aaKnown RBP21.66■■□□□ 1.06
ITGA3-209ENST00000506827 FER1L4A9Z1Z3 1794 aa21.65■■□□□ 1.06
ITGA3-209ENST00000506827 CAMSAP1Q5T5Y3 1602 aa21.65■■□□□ 1.06
ITGA3-209ENST00000506827 PTPRMP28827 1452 aa21.63■■□□□ 1.05
ITGA3-209ENST00000506827 CEP152O94986 1710 aa21.63■■□□□ 1.05
ITGA3-209ENST00000506827 CLSPNQ9HAW4 1339 aa21.62■■□□□ 1.05
ITGA3-209ENST00000506827 CEBPAP49715 358 aaPredicted RBP21.62■■□□□ 1.05
ITGA3-209ENST00000506827 FBXO31Q5XUX0 539 aaPredicted RBP21.62■■□□□ 1.05
ITGA3-209ENST00000506827 SLC52A1Q9NWF4 448 aa21.62■■□□□ 1.05
ITGA3-209ENST00000506827 PTPRTO14522 1441 aa21.62■■□□□ 1.05
ITGA3-209ENST00000506827 FOXD1Q16676 465 aa21.61■■□□□ 1.05
ITGA3-209ENST00000506827 NOS1P29475 1434 aa21.61■■□□□ 1.05
ITGA3-209ENST00000506827 CCER1Q8TC90 406 aaPredicted RBP21.6■■□□□ 1.05
ITGA3-209ENST00000506827 RIMS1Q86UR5 1692 aaKnown RBP21.59■■□□□ 1.05
ITGA3-209ENST00000506827 ANKRD30BQ9BXX2 1392 aa21.59■■□□□ 1.05
ITGA3-209ENST00000506827 ERVK-7P63135 1459 aa21.58■■□□□ 1.05
ITGA3-209ENST00000506827 TNRQ92752 1358 aa21.58■■□□□ 1.04
ITGA3-209ENST00000506827 E9PCH4 1651 aa21.57■■□□□ 1.04
ITGA3-209ENST00000506827 PLPPR3Q6T4P5 718 aa21.56■■□□□ 1.04
ITGA3-209ENST00000506827 SPATA31D1Q6ZQQ2 1576 aa21.56■■□□□ 1.04
ITGA3-209ENST00000506827 CCDC144AA2RUR9 1427 aa21.54■■□□□ 1.04
ITGA3-209ENST00000506827 C3P01024 1663 aa21.53■■□□□ 1.04
ITGA3-209ENST00000506827 PLA2R1Q13018 1463 aa21.53■■□□□ 1.04
ITGA3-209ENST00000506827 TRPM2O94759 1503 aa21.52■■□□□ 1.04
ITGA3-209ENST00000506827 NLRP1Q9C000 1473 aa21.52■■□□□ 1.03
ITGA3-209ENST00000506827 IDI1Q13907 227 aa21.51■■□□□ 1.03
ITGA3-209ENST00000506827 PREX1Q8TCU6 1659 aa21.5■■□□□ 1.03
ITGA3-209ENST00000506827 STAG3Q9UJ98 1225 aa21.48■■□□□ 1.03
ITGA3-209ENST00000506827 SPHKAPQ2M3C7 1700 aa21.46■■□□□ 1.03
ITGA3-209ENST00000506827 SYNMO15061 1565 aa21.45■■□□□ 1.02
ITGA3-209ENST00000506827 THEMISQ8N1K5 641 aaPredicted RBP21.44■■□□□ 1.02
ITGA3-209ENST00000506827 UHRF1BP1Q6BDS2 1440 aa21.44■■□□□ 1.02
ITGA3-209ENST00000506827 CHGAP10645 457 aaKnown RBP21.43■■□□□ 1.02
ITGA3-209ENST00000506827 A2ML1A8K2U0 1454 aa21.42■■□□□ 1.02
ITGA3-209ENST00000506827 NEUROD1Q13562 356 aa21.42■■□□□ 1.02
ITGA3-209ENST00000506827 SIN3AQ96ST3 1273 aa21.42■■□□□ 1.02
ITGA3-209ENST00000506827 TIMELESSQ9UNS1 1208 aa21.42■■□□□ 1.02
ITGA3-209ENST00000506827 SETD1BQ9UPS6 1966 aaKnown RBP21.41■■□□□ 1.02
ITGA3-209ENST00000506827 HDGFP51858 240 aaKnown RBP21.41■■□□□ 1.02
ITGA3-209ENST00000506827 PIK3C2BO00750 1634 aa21.4■■□□□ 1.02
ITGA3-209ENST00000506827 RPGRIP1LQ68CZ1 1315 aa21.4■■□□□ 1.02
ITGA3-209ENST00000506827 STAC3Q96MF2 364 aa21.4■■□□□ 1.02
ITGA3-209ENST00000506827 CLTCL1P53675 1640 aa21.38■■□□□ 1.01
ITGA3-209ENST00000506827 UGGT1Q9NYU2 1555 aa21.38■■□□□ 1.01
ITGA3-209ENST00000506827 CFAP65Q6ZU64 1925 aaKnown RBP21.37■■□□□ 1.01
ITGA3-209ENST00000506827 NEURL4Q96JN8 1562 aa21.37■■□□□ 1.01
ITGA3-209ENST00000506827 ZNF326Q5BKZ1 582 aaKnown RBP21.37■■□□□ 1.01
ITGA3-209ENST00000506827 SPATA31E1Q6ZUB1 1445 aa21.37■■□□□ 1.01
ITGA3-209ENST00000506827 RGL3Q3MIN7 710 aa21.35■■□□□ 1.01
ITGA3-209ENST00000506827 AEBP2Q6ZN18 517 aaPredicted RBP21.35■■□□□ 1.01
ITGA3-209ENST00000506827 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.35■■□□□ 1.01
ITGA3-209ENST00000506827 CEP170BQ9Y4F5 1589 aaPredicted RBP21.35■■□□□ 1.01
ITGA3-209ENST00000506827 ADGRB3O60242 1522 aa21.34■■□□□ 1.01
ITGA3-209ENST00000506827 MYO3AQ8NEV4 1616 aa21.34■■□□□ 1.01
ITGA3-209ENST00000506827 TONSLQ96HA7 1378 aa21.34■■□□□ 1.01
ITGA3-209ENST00000506827 KDM5AP29375 1690 aaKnown RBP21.33■■□□□ 1
ITGA3-209ENST00000506827 EID1Q9Y6B2 187 aa21.32■■□□□ 1
ITGA3-209ENST00000506827 TMEM2Q9UHN6 1383 aa21.32■■□□□ 1
ITGA3-209ENST00000506827 VGFO15240 615 aaPredicted RBP21.31■■□□□ 1
ITGA3-209ENST00000506827 TMEM131LA2VDJ0 1609 aa21.3■■□□□ 1
ITGA3-209ENST00000506827 ANKLE2Q86XL3 938 aa21.29■■□□□ 1
ITGA3-209ENST00000506827 L3MBTL2Q969R5 705 aa21.29■■□□□ 1
ITGA3-209ENST00000506827 ZNF142P52746 1687 aaPredicted RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms