RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 DEPDC5O75140 1603 aa19.36■□□□□ 0.69
TCOF1-210ENST00000506767 MROH1Q8NDA8 1641 aa19.36■□□□□ 0.69
TCOF1-210ENST00000506767 TRIM26Q12899 539 aaPredicted RBP19.35■□□□□ 0.69
TCOF1-210ENST00000506767 GGT6Q6P531 493 aa19.35■□□□□ 0.69
TCOF1-210ENST00000506767 MADDQ8WXG6 1647 aa19.34■□□□□ 0.69
TCOF1-210ENST00000506767 FER1L4A9Z1Z3 1794 aa19.33■□□□□ 0.68
TCOF1-210ENST00000506767 PRDM15P57071 1507 aaPredicted RBP19.32■□□□□ 0.68
TCOF1-210ENST00000506767 FAM135AQ9P2D6 1515 aa19.32■□□□□ 0.68
TCOF1-210ENST00000506767 UNC13BO14795 1591 aa19.31■□□□□ 0.68
TCOF1-210ENST00000506767 KDM5DQ9BY66 1539 aa19.3■□□□□ 0.68
TCOF1-210ENST00000506767 VWDEQ8N2E2 1590 aa19.29■□□□□ 0.68
TCOF1-210ENST00000506767 SETD5Q9C0A6 1442 aa19.29■□□□□ 0.68
TCOF1-210ENST00000506767 CNTLNQ9NXG0 1405 aa19.28■□□□□ 0.68
TCOF1-210ENST00000506767 RIMS1Q86UR5 1692 aaKnown RBP19.28■□□□□ 0.68
TCOF1-210ENST00000506767 CLTCQ00610 1675 aaKnown RBP19.27■□□□□ 0.68
TCOF1-210ENST00000506767 ZC3H13Q5T200 1668 aaKnown RBP19.27■□□□□ 0.68
TCOF1-210ENST00000506767 MROH2AA6NES4 1674 aa19.27■□□□□ 0.67
TCOF1-210ENST00000506767 ABCC3O15438 1527 aa19.26■□□□□ 0.67
TCOF1-210ENST00000506767 WASHC2CQ9Y4E1 1318 aa19.25■□□□□ 0.67
TCOF1-210ENST00000506767 PTPRMP28827 1452 aa19.25■□□□□ 0.67
TCOF1-210ENST00000506767 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.25■□□□□ 0.673e-8■■■■■ 27.6
TCOF1-210ENST00000506767 LMTK2Q8IWU2 1503 aa19.25■□□□□ 0.67
TCOF1-210ENST00000506767 KANK1Q14678 1352 aa19.24■□□□□ 0.67
TCOF1-210ENST00000506767 ESF1Q9H501 851 aaKnown RBP19.24■□□□□ 0.67
TCOF1-210ENST00000506767 CEP152O94986 1710 aa19.24■□□□□ 0.67
TCOF1-210ENST00000506767 IQGAP3Q86VI3 1631 aa19.22■□□□□ 0.67
TCOF1-210ENST00000506767 ZMYM3Q14202 1370 aa19.22■□□□□ 0.67
TCOF1-210ENST00000506767 RAB3GAP2Q9H2M9 1393 aa19.22■□□□□ 0.67
TCOF1-210ENST00000506767 NUP155O75694 1391 aa19.21■□□□□ 0.67
TCOF1-210ENST00000506767 C3P01024 1663 aa19.21■□□□□ 0.67
TCOF1-210ENST00000506767 HRCP23327 699 aa19.21■□□□□ 0.67
TCOF1-210ENST00000506767 CAMSAP1Q5T5Y3 1602 aa19.2■□□□□ 0.66
TCOF1-210ENST00000506767 ACIN1Q9UKV3 1341 aaKnown RBP19.2■□□□□ 0.66
TCOF1-210ENST00000506767 ARHGAP31Q2M1Z3 1444 aa19.18■□□□□ 0.66
TCOF1-210ENST00000506767 TET3O43151 1660 aa19.17■□□□□ 0.66
TCOF1-210ENST00000506767 CEBPAP49715 358 aaPredicted RBP19.17■□□□□ 0.66
TCOF1-210ENST00000506767 PLPPR3Q6T4P5 718 aa19.17■□□□□ 0.66
TCOF1-210ENST00000506767 PZPP20742 1482 aa19.16■□□□□ 0.66
TCOF1-210ENST00000506767 EFCAB6Q5THR3 1501 aa19.15■□□□□ 0.66
TCOF1-210ENST00000506767 TRIM52Q96A61 297 aa19.15■□□□□ 0.66
TCOF1-210ENST00000506767 NPATQ14207 1427 aa19.14■□□□□ 0.65
TCOF1-210ENST00000506767 E9PCH4 1651 aa19.12■□□□□ 0.65
TCOF1-210ENST00000506767 RPRD2Q5VT52 1461 aaKnown RBP19.11■□□□□ 0.65
TCOF1-210ENST00000506767 FBXO31Q5XUX0 539 aaPredicted RBP19.11■□□□□ 0.65
TCOF1-210ENST00000506767 SPATA31D1Q6ZQQ2 1576 aa19.1■□□□□ 0.65
TCOF1-210ENST00000506767 PREX1Q8TCU6 1659 aa19.09■□□□□ 0.65
TCOF1-210ENST00000506767 ILDR1Q86SU0 546 aaPredicted RBP19.09■□□□□ 0.65
TCOF1-210ENST00000506767 PCGF6Q9BYE7 350 aa19.09■□□□□ 0.65
TCOF1-210ENST00000506767 ERVK-7P63135 1459 aa19.09■□□□□ 0.65
TCOF1-210ENST00000506767 MPHOSPH9Q99550 1183 aa19.08■□□□□ 0.64
TCOF1-210ENST00000506767 SETD1BQ9UPS6 1966 aaKnown RBP19.07■□□□□ 0.64
TCOF1-210ENST00000506767 SLC4A1APQ9BWU0 796 aaKnown RBP19.07■□□□□ 0.64
TCOF1-210ENST00000506767 CFAP65Q6ZU64 1925 aaKnown RBP19.07■□□□□ 0.64
TCOF1-210ENST00000506767 NOS1P29475 1434 aa19.07■□□□□ 0.64
TCOF1-210ENST00000506767 PKD2Q13563 968 aa19.04■□□□□ 0.64
TCOF1-210ENST00000506767 TNRQ92752 1358 aa19.04■□□□□ 0.64
TCOF1-210ENST00000506767 SYNMO15061 1565 aa19.02■□□□□ 0.64
TCOF1-210ENST00000506767 PTPRTO14522 1441 aa19.02■□□□□ 0.64
TCOF1-210ENST00000506767 MYO3AQ8NEV4 1616 aa19.01■□□□□ 0.63
TCOF1-210ENST00000506767 SPHKAPQ2M3C7 1700 aa19■□□□□ 0.63
TCOF1-210ENST00000506767 PLA2R1Q13018 1463 aa18.99■□□□□ 0.63
TCOF1-210ENST00000506767 NLRP1Q9C000 1473 aa18.99■□□□□ 0.63
TCOF1-210ENST00000506767 UHRF1BP1Q6BDS2 1440 aa18.98■□□□□ 0.63
TCOF1-210ENST00000506767 ZNF142P52746 1687 aaPredicted RBP18.98■□□□□ 0.63
TCOF1-210ENST00000506767 PIK3C2BO00750 1634 aa18.97■□□□□ 0.63
TCOF1-210ENST00000506767 FOXD1Q16676 465 aa18.97■□□□□ 0.63
TCOF1-210ENST00000506767 SLC52A1Q9NWF4 448 aa18.97■□□□□ 0.63
TCOF1-210ENST00000506767 LMTK3Q96Q04 1460 aa18.97■□□□□ 0.63
TCOF1-210ENST00000506767 TRPM2O94759 1503 aa18.96■□□□□ 0.63
TCOF1-210ENST00000506767 CEP170BQ9Y4F5 1589 aaPredicted RBP18.96■□□□□ 0.63
TCOF1-210ENST00000506767 A2ML1A8K2U0 1454 aa18.96■□□□□ 0.63
TCOF1-210ENST00000506767 HSPA2P54652 639 aa18.95■□□□□ 0.62
TCOF1-210ENST00000506767 IDI1Q13907 227 aa18.95■□□□□ 0.62
TCOF1-210ENST00000506767 UGGT1Q9NYU2 1555 aa18.93■□□□□ 0.62
TCOF1-210ENST00000506767 DHX57Q6P158 1386 aaKnown RBP18.93■□□□□ 0.62
TCOF1-210ENST00000506767 KDM5AP29375 1690 aaKnown RBP18.92■□□□□ 0.62
TCOF1-210ENST00000506767 ANKRD30BQ9BXX2 1392 aa18.92■□□□□ 0.62
TCOF1-210ENST00000506767 CLTCL1P53675 1640 aa18.91■□□□□ 0.62
TCOF1-210ENST00000506767 UBR1Q8IWV7 1749 aa18.91■□□□□ 0.62
TCOF1-210ENST00000506767 ADGRB3O60242 1522 aa18.88■□□□□ 0.61
TCOF1-210ENST00000506767 TMEM131LA2VDJ0 1609 aa18.88■□□□□ 0.61
TCOF1-210ENST00000506767 THEMISQ8N1K5 641 aaPredicted RBP18.86■□□□□ 0.61
TCOF1-210ENST00000506767 CCDC144AA2RUR9 1427 aa18.85■□□□□ 0.61
TCOF1-210ENST00000506767 KIF1BO60333 1816 aa18.84■□□□□ 0.61
TCOF1-210ENST00000506767 MYO5BQ9ULV0 1848 aa18.84■□□□□ 0.61
TCOF1-210ENST00000506767 ARHGAP23Q9P227 1491 aa18.83■□□□□ 0.6
TCOF1-210ENST00000506767 STAG3Q9UJ98 1225 aa18.82■□□□□ 0.6
TCOF1-210ENST00000506767 SLIT1O75093 1534 aa18.82■□□□□ 0.6
TCOF1-210ENST00000506767 NEURL4Q96JN8 1562 aa18.81■□□□□ 0.6
TCOF1-210ENST00000506767 SPATA31E1Q6ZUB1 1445 aa18.8■□□□□ 0.6
TCOF1-210ENST00000506767 TMEM2Q9UHN6 1383 aa18.8■□□□□ 0.6
TCOF1-210ENST00000506767 CHGAP10645 457 aaKnown RBP18.79■□□□□ 0.6
TCOF1-210ENST00000506767 STRCQ7RTU9 1775 aa18.78■□□□□ 0.6
TCOF1-210ENST00000506767 ZFYVE9O95405 1425 aa18.77■□□□□ 0.6
TCOF1-210ENST00000506767 FBXO41Q8TF61 875 aa18.77■□□□□ 0.6
TCOF1-210ENST00000506767 POLR1AO95602 1720 aaPredicted RBP18.75■□□□□ 0.59
TCOF1-210ENST00000506767 ANKLE2Q86XL3 938 aa18.75■□□□□ 0.59
TCOF1-210ENST00000506767 RIMS2Q9UQ26 1411 aa18.74■□□□□ 0.59
TCOF1-210ENST00000506767 LTKP29376 864 aa18.74■□□□□ 0.59
TCOF1-210ENST00000506767 NEXMIFQ5QGS0 1516 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms